Bacillus mojavensis: HC660_15180
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Entry
HC660_15180 CDS
T07122
Symbol
rnjA
Name
(GenBank) Ribonuclease J1 (endonuclease and 5' exonuclease)
KO
K12574
ribonuclease J [EC:3.1.-.-]
Organism
bmoj
Bacillus mojavensis
Pathway
bmoj03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bmoj00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
HC660_15180 (rnjA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bmoj03019
]
HC660_15180 (rnjA)
Messenger RNA biogenesis [BR:
bmoj03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
HC660_15180 (rnjA)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_J_b_CASP
RNase_J_C
Lactamase_B
Lactamase_B_2
RMMBL
Anti-Pycsar_Apyc1
DUF5548
DUF4453
Motif
Other DBs
NCBI-ProteinID:
QJC95994
UniProt:
A0AAP3CRG8
LinkDB
All DBs
Position
complement(1526668..1528335)
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AA seq
555 aa
AA seq
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MKFVKNDQTAVFALGGLGEIGKNTYAVQFQDEIVLIDAGIKFPEDELLGIDYVIPDYTYL
VKNEDKIKGLFITHGHEDHIGGIPYLLRQVNIPVYGGKLAIGLLRNKLEEHGLLRQTKLN
IIGEDDIVKFRKTAVSFFRTTHSIPDSYGIVVKTPPGNIVHTGDFKFDFTPVGEPANLTK
MAEIGKEGVLCLLSDSTNSENPEFTMSERRVGESIHDIFRKVDGRVIFATFASNIHRLQQ
VIEAAVLNGRKVAVFGRSMESAIEIGQTLGYINCPKNTFIEHNEINRIPANKVTILCTGS
QGEPMAALSRIANGTHRQISINPGDTVVFSSSPIPGNTISVSRTINQLYRAGAEVIHGPL
NDIHTSGHGGQEEQKLMLRLIKPKFFMPIHGEYRMQKMHVKLATDCGIPEENCFIMDNGE
VLALKGDEASVAGKIPSGSVYIDGSGIGDIGNIVLRDRRILSEEGLVIVVVSIDMDDFKI
SAGPDLISRGFVYMRESGDLINDAQELISNHLQKVMERKTTQWSEIKNEITDTLAPFLYE
KTKRRPMILPIIMEV
NT seq
1668 nt
NT seq
+upstream
nt +downstream
nt
atgaaatttgtaaaaaatgatcagactgctgttttcgccctcggaggactgggcgaaatc
ggtaaaaatacgtatgcggtgcagtttcaggatgaaattgtgctgattgatgcggggatt
aagtttcccgaggacgaactgctcggtattgattacgtcattcccgattacacgtattta
gtcaaaaacgaagataaaattaaagggctttttattacgcacgggcacgaagaccacatc
ggcggcatcccgtacctgcttagacaagtcaatattcccgtttacggcggtaaactcgcg
atcggcttacttcggaataaacttgaagagcatggattattaagacagaccaagcttaac
atcatcggtgaggatgatatcgtaaaatttcgcaaaacggctgtgtcattctttagaaca
acacacagtattccggattcctacggtattgttgtaaaaacgccgcccggaaacatcgta
catactggagatttcaaattcgactttactccagtcggcgaaccggcaaacttaacgaaa
atggccgaaatcggcaaagaaggcgttctgtgtctcctttcagacagcacaaacagtgaa
aaccctgagttcactatgtctgaacgccgtgtcggagaaagcattcatgacattttccgc
aaggtggacggccgagttatcttcgctacatttgcgtcgaatattcaccgcttgcagcag
gtaattgaggctgctgtattaaatggaagaaaagttgccgtatttggacgcagtatggaa
tcggctatcgaaatcggacaaactctcggctatattaactgtcctaaaaatacgtttatt
gaacataatgaaatcaatcgcattcctgccaataaagtaacgatcctgtgtacaggaagc
caaggggaaccgatggcggctttatccagaattgcaaacggcacacaccggcagatttct
atcaatcctggggatacagtcgtattttcttcatcccctatcccaggcaacactatcagc
gtgagccgtacaattaaccagctgtatcgtgcgggggctgaggttattcacggacctctt
aatgatatccatacatcaggccacggcggacaggaagaacaaaagctgatgctacgttta
atcaagcctaaattcttcatgccgattcacggtgagtacagaatgcaaaagatgcatgtc
aagcttgcaacagattgcggcatccctgaagaaaactgctttatcatggataatggtgaa
gtattggcgcttaaaggcgatgaagcttcagttgccggtaaaattccatccggttcagta
tacatcgacggcagcggtatcggtgatattggaaatatcgtgcttcgcgaccgcagaatt
ctttctgaagaaggtcttgtgatcgtcgttgtcagcatagatatggatgactttaagatt
tcagcgggccctgacttgatttccagaggatttgtttacatgagagaatcgggcgatttg
atcaatgacgcccaagagctcatttcaaaccacttacaaaaagtcatggaacgaaaaacc
actcaatggtcagaaatcaaaaatgagattacggatacgcttgctccgttcttatatgaa
aaaacgaaacgccgcccaatgatccttccgatcattatggaggtttaa
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