Bacillus mojavensis: HC660_28010
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Entry
HC660_28010 CDS
T07122
Symbol
dnaEC
Name
(GenBank) DNA polymerase III alpha subunit
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
bmoj
Bacillus mojavensis
Pathway
bmoj03030
DNA replication
bmoj03430
Mismatch repair
bmoj03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bmoj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
HC660_28010 (dnaEC)
03430 Mismatch repair
HC660_28010 (dnaEC)
03440 Homologous recombination
HC660_28010 (dnaEC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bmoj03032
]
HC660_28010 (dnaEC)
03400 DNA repair and recombination proteins [BR:
bmoj03400
]
HC660_28010 (dnaEC)
Enzymes [BR:
bmoj01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
HC660_28010 (dnaEC)
DNA replication proteins [BR:
bmoj03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
HC660_28010 (dnaEC)
DNA repair and recombination proteins [BR:
bmoj03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
HC660_28010 (dnaEC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
HROB
tRNA_anti_2
DNA_pol_IIIA_C
POT1
DUF4183
DUF3860-like
Motif
Other DBs
NCBI-ProteinID:
QJC97274
UniProt:
A0A6H2JTT7
LinkDB
All DBs
Position
complement(2796654..2800001)
Genome browser
AA seq
1115 aa
AA seq
DB search
MSFVHLQVHSGYSLLNSAASVEELVSEADRLGYGSLALTDDHVMYGAIQFYKACKARGIN
PIIGLTASVFTDDDELEAYPLVLLAKSNTGYQNLLKISSVLQSKSKNGLKPKWLNSYRKG
IIAITPGEKGYIEMLLEGGLFDQAAQAALHFQSIFGKGAFYLSFQPFKENKFLSEQILRL
SEETGIPVTATGDVHYIRKEDQAAYRCLKAIKSGEKLTEASNEEMPDLDLKSIDEMRVLY
QEHPEALQASVEIAEQCRVDVSLGQTRLPSFPTPDGSSADDYLTDVCMTGLRSRFDTPDE
RYIRRLQYELDVIKRMKFSDYFLIVWDFMKHAHENGIVTGPGRGSAAGSLVAYVLYITDV
DPIKHHLLFERFLNPERISMPDIDIDFPDTRRDEVIQYVQQKYGAMHVAQIITFGTLAAK
AALRDVGRVFGVSPKEADQLAKLIPSRPGMTLDDARKQSPELNKRLSESSLLQQVFTIAR
KIEGLPRHTSTHAAGVVLSEEPLTDVVPLQEGHEGIYLTQYAMDHLEDLGLLKMDFLGLR
NLTLIESITSMIEKEKNMKIDLSSISYQDEKTFSLLSKGDTTGIFQLESSGMRSVLKRLK
PSGLEDIVAVNALYRPGPMENIPLFIDRKHGRVPVHYPHEDLREILEDTYGVIVYQEQIM
VIASRMAGFSLGEADLLRRAVSKKKKDILDRERSHFVEGCLKKEYSVDTANEVYDLIVKF
ANYGFNRSHAVAYSMIGCQLAYLKAHYPLYFMCGLLTSVIGNEDKIAQYLYEAKGSGIRI
LPPSVNKSSYPFTVEGGAVRYSLRAIKSVGVSAVKDIYKARKEKPFEDLFDFCFRVPSKS
VNRKTLEALIFSGAMDEFAQNRATLLASIDVALEHAELFAADDDQMGLFLDESFSIKPKY
VETEELPLVDILAFEKETLGIYFSNHPLSAFRNQLTARGAVSIQQAQQTVKKQVSLGVLL
TKIKTIRTKTGQNMAFLTLSDETGEMEAVVFPEQFRQLSPVLREGALLFTAGKCEIRQEK
AQFIMSRAELLENMNAEKAPSVYIKIESSQHSQEILTKIKRILLEHKGETGVYLYYERQK
QTIKLPEEFHIEADHQVLYRLKELLGQKNVVLKQW
NT seq
3348 nt
NT seq
+upstream
nt +downstream
nt
atgtcttttgttcacctgcaagtgcatagcgggtacagcctgctaaacagcgccgcgtct
gtggaagagctcgtcagtgaagctgacaggctcggatatgggtctttggcgctgacagat
gatcatgtcatgtacggagctattcaattttataaagcatgcaaggcgagggggattaac
ccgattatcggcttgacggcttctgttttcacagatgatgacgagctcgaagcctacccg
ctcgtcctgctggcaaaatcaaatacaggctatcaaaacctgctgaagatcagcagcgtc
ctgcaatcgaaatcaaaaaacggcctgaagccaaaatggcttaacagctatcgcaaaggt
attatcgcaattacccctggtgagaagggctatattgaaatgctgctcgaaggaggtctg
tttgaccaagccgctcaagcagcgcttcattttcagtctatattcgggaaaggcgctttt
tatttatcctttcagccgtttaaagaaaataaattcttatctgagcaaattctccggctg
tctgaagaaacgggaattccggtcacggcgacaggcgatgttcattacataaggaaagaa
gatcaggctgcctatcgctgtttgaaagcgataaagtcaggtgaaaaactcactgaggca
tcaaacgaagagatgccggatctcgatttgaaatccattgatgaaatgcgtgttctatat
caagagcatcctgaggcattgcaagcatctgttgagattgcagaacaatgccgggttgac
gtcagcctcggacagacccgcctgccgtcatttccgactccagacggttcatccgcggat
gattatttgacggatgtttgtatgacagggctccgcagccgctttgatacacctgacgaa
cggtatattcgacgacttcaatatgagcttgatgtcatcaagcgaatgaagttcagcgat
tattttctgatcgtatgggattttatgaagcacgcccacgaaaacgggattgtgacagga
ccgggaaggggttctgcggcgggatcgctcgtggcttatgttctctatatcacggacgtt
gacccgatcaagcatcacctgttatttgagaggtttttaaacccggagcgaatcagtatg
ccggatattgatatcgactttccggatacgagaagggacgaggtcattcagtacgttcag
cagaaatatggcgccatgcacgtcgcccagattattaccttcgggacgctggcggcaaaa
gcagcgcttcgggacgtcggaagggtattcggtgtaagtccgaaggaagcggatcagctt
gcgaagctcattccttcaaggccgggcatgaccttggatgatgcgagaaaacaatcaccg
gagctgaataagcgtctcagtgagtcaagtctgcttcagcaagtctttacgattgccaga
aaaatagaaggtcttccgaggcatacgtcaacccacgcggccggcgttgtcctgagtgag
gaaccgttaacagatgttgtcccgcttcaggaaggacatgaagggatctatttaacgcaa
tacgcgatggatcacctcgaagatctgggccttttgaaaatggatttcttaggcttgcgc
aacctgacactcatcgagtccatcacttcaatgattgaaaaagaaaaaaatatgaaaata
gatctttcgagtatttcttatcaagacgaaaaaacattctctctgctgtcaaaaggggat
acgacagggatttttcagcttgaatcctcaggaatgagaagcgttctgaaaaggcttaag
ccctcaggattagaagatattgtcgcggtaaacgcgctgtaccggcccggtccgatggaa
aacattccgttatttatcgaccgtaagcatgggcgggtgccggtccattatccccatgag
gatttaagagagatattggaagatacgtatggcgtcatcgtttatcaagagcaaattatg
gtgattgcgtcacgtatggcaggattttctttaggagaggcggacctgctcagacgtgca
gtcagcaaaaaaaagaaagacattcttgaccgagagcgaagccattttgttgaagggtgc
ttaaaaaaggagtattctgtagacactgcaaatgaagtctacgatttaatcgtcaaattc
gcaaactatggcttcaacagaagccatgcggtggcatacagcatgatcggctgccagctt
gcttatttgaaggctcattatcctttatattttatgtgcggattgcttacaagcgtcatt
ggcaatgaggataaaatagctcaatatctatacgaagcgaaggggagcgggattcgtatc
cttcctccgtcagtgaacaaaagcagttatccgtttacagttgaaggcggagctgtcagg
tacagcctccgtgcgataaaaagtgtaggcgtctcagcagtcaaagatatatataaagcc
agaaaagagaaaccattcgaagatcttttcgatttctgctttcgtgtgccgtcaaaaagc
gtaaaccgcaaaacgcttgaagcgctcatattttctggtgcaatggatgaattcgctcaa
aaccgggccacactgctcgcatcgattgacgttgcgttagagcatgccgagcttttcgcc
gcggacgatgaccaaatgggattgtttttagatgaatcgttttccattaaaccgaagtat
gtggagaccgaggagctcccgcttgtggatattcttgcatttgaaaaagaaacgctcggt
atttatttttcaaatcatccgctctctgccttccgaaaccagctgacagcgcgcggagcg
gtatccattcagcaggctcagcagactgttaaaaagcaggtttcactcggtgtcctgctg
acgaaaatcaaaacgattcggacaaaaacaggtcaaaacatggcgtttttaacgttaagc
gatgagaccggtgagatggaagccgttgtgttccctgaacaattcagacagctttctccc
gttttaagagagggcgctctattgttcacagcagggaaatgtgaaatcaggcaggaaaaa
gcccagtttattatgtccagagcggaattgctggaaaatatgaatgctgaaaaagcgcca
tcggtttatattaaaatagaaagcagtcagcacagtcaggagatcctgacaaagataaag
cgcattttgctggagcataagggggaaaccggcgtttatctctattatgaaaggcaaaaa
cagacgataaagcttcctgaggagttccatatcgaggcggatcaccaggtattataccgc
ttaaaagagctgttagggcaaaaaaacgtcgttttaaaacagtggtaa
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