Blastococcus montanus: ABDB74_06255
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Entry
ABDB74_06255 CDS
T10593
Name
(GenBank) Rne/Rng family ribonuclease
KO
K08300
ribonuclease E [EC:
3.1.26.12
]
Organism
bmon Blastococcus montanus
Pathway
bmon03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bmon00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
ABDB74_06255
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bmon03019
]
ABDB74_06255
03009 Ribosome biogenesis [BR:
bmon03009
]
ABDB74_06255
Enzymes [BR:
bmon01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.12 ribonuclease E
ABDB74_06255
Messenger RNA biogenesis [BR:
bmon03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
ABDB74_06255
Ribosome biogenesis [BR:
bmon03009
]
Prokaryotic type
rRNA processing factors
ABDB74_06255
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_E_G
S1
Motif
Other DBs
NCBI-ProteinID:
XAW57263
LinkDB
All DBs
Position
1276021..1279308
Genome browser
AA seq
1095 aa
AA seq
DB search
MADTDHTSETDRTEEGAERIAPDTPQPAEAEATGTPATAEEGAPVEEQPAEERPAEEEEE
PTGDEPAAQQPAAEDLDPEPERSRFGAQFSSPEPTAVVARPRRRATRPAGAADPDSIEAV
APAPAAPVPAFISFVAPPADAPPAPRRRSRRPAESPEPDAVEDTGGADRDTGADEAPEEA
PRSRRSRSRRRPAEEQPEPSRTDSAEDEQTDDADDRDESGEDRDEGGSSASRRRRRGRRG
RGRGRSGEDAEEENGDDRPGADDAETDDEETDTDRADESSDTEDEGEGEDEGSTGSSTRR
RRRRRRRSGSAGGEDTAEDTDDDDRPERAGRNGRSTSDDDVRGIAGSTRLEAKRQRRRDG
RDTGRRRQPILTESEFLARREAVDRKMVIRQRGERTQIAVLEDDVLVEHYVTQASATSFA
GNVYLGRVQNVLPSMEAAFVDIGKGRNAVVYAGEVNWDAAGLSGKQRSIEQAFKSGDKIL
VQVTKDPIGHKGARLTQQINLPGRFLVYVPGGSMTGISRKLPDTERQRLKDILKRIVPED
AGVIIRTAAEGASEEELTRDVNRLTAQWDVIQKKAASTSNAPTLLYGEPDLAIRVIRDVF
NEDFKELVVQGDDAWDTVEAYVAHVSPELTERLSRYTGQGDVFHDLRIDEQLTKALDRKV
WLPSGGSLVIDRTEAMTVVDVNTGKFTGSGGNLEQTVTRNNMEAAEEIVRQLRLRDIGGI
IVIDFIDMVLESNRDLVLRRLTECLGRDRTKHQVAEVTSLGLVQMTRKRVGQGLLEVFSE
SCEHCRGRGILVHLDPVDEKRRGGGNGGGSGSGTGGGKDAAAKDSGKESGGGRNRGNGGG
GGKDTAKDTAKDTAKDTAKDSEKDTARDSEKDVEKDTAEETADTGAADVASGEGDAPEGG
RGGGRRNRGRRNRGQSGEDRAAEDAAVLAGARADDGTPAGQPVADGSAEAVTDVAPSTAP
MPPVAAPPAESQQEAPAGTGTAPAARPARKGGRPVTTVEPLPASAPVPVASAEIEADDVL
PAGEVAAVEAPEQDAMPITPATTAADVVPGGVAHDADAGAPADAPAPAQTPAADGEAPAR
PRRRRAASRPAGPPA
NT seq
3288 nt
NT seq
+upstream
nt +downstream
nt
gtggctgacaccgaccacaccagcgagaccgaccggaccgaggaaggcgcggagcgcatc
gcgccggacaccccccagcccgcggaggcggaggccaccggcaccccggccaccgccgag
gagggcgcacccgtcgaggagcagcccgccgaggaacggcccgccgaggaggaggaggag
cccaccggcgacgagccggctgcgcagcagccggccgccgaggacctcgatccggagccg
gagcggtcccggttcggagcccagttcagctcgccggagcccaccgccgtcgtggcccgt
ccccgtcgccgggcgacgcgcccggccggcgccgccgacccggactcgatcgaggcggtc
gccccggcgcccgcggccccggtcccggccttcatcagcttcgtcgcgcccccggccgac
gcgcccccggccccccgccggcgcagccgccggccggcggagtcgcccgagcccgacgcg
gtcgaggacaccggcggcgcggaccgcgacaccggtgcggacgaggcccccgaggaggcc
ccccggtcccgccggagccgctcccgccgccgcccggccgaggagcagccggagccgtcc
cggaccgacagcgccgaggacgagcagaccgacgacgccgacgaccgtgacgagtccggc
gaggaccgcgacgagggcgggtcgtcggccagccgccggcgtcgccgtggacgccggggc
cgcggtcgcgggcgcagcggcgaggacgccgaggaggagaacggcgacgaccgcccgggc
gccgacgacgccgagaccgacgacgaggagaccgacaccgaccgcgccgacgagtcctcg
gacaccgaggacgagggcgagggcgaggacgagggttcgaccggctccagcacccgccgt
cgccggcggcgccgtcgccgcagcggcagcgcgggcggcgaggacacggccgaggacacc
gacgacgacgaccgcccggagcgggccggccgcaacggccgcagcaccagcgacgacgac
gtccgcggcatcgccggctccacccggctcgaggccaagcgccagcgccgccgggacggc
cgggacaccgggcgccgtcgtcagccgatcctcaccgagagcgagttcctcgcccgccgc
gaggcggtggaccgcaagatggtcatccgccagcgcggcgagcggacgcagatcgccgtc
ctcgaggacgacgtcctcgtcgagcactacgtgacccaggcctcggcgacgtcgttcgcc
ggcaacgtctacctcggccgggtgcagaacgtgctccccagcatggaggcggcgttcgtc
gacatcggcaaggggcgcaacgccgtcgtctacgccggtgaggtcaactgggacgccgcc
ggcctgtcgggcaagcagcgctccatcgagcaggcgttcaagtccggcgacaagatcctg
gtgcaggtcaccaaggacccgatcggccacaagggcgcccggctgacccagcagatcaac
ctgcccggccgcttcctggtgtacgtgcccggcggctcgatgaccgggatcagccgcaag
ctgcccgacaccgagcggcagcggctcaaggacatcctgaagcggatcgtccccgaggac
gccggcgtgatcatccggacggccgcggagggcgcctcggaggaggagctcacccgcgac
gtcaaccggctgaccgcgcagtgggacgtcatccagaagaaggccgcatcgacgtcaaac
gcgccgacgctcctctacggcgagccggacctcgccatccgggtcatccgcgacgtcttc
aacgaggacttcaaggagctcgtggtccagggcgacgacgcctgggacaccgtcgaggcc
tacgtcgcccacgtcagccccgagctcaccgagcggctctcccgctacaccggccagggc
gacgtcttccacgacctgcggatcgacgagcagctgaccaaggcgctggaccgcaaggtg
tggctgccctcgggtggctcgctggtgatcgaccggaccgaggcgatgaccgtggtcgac
gtcaacaccggcaagttcaccggctcgggcggcaacctcgagcagaccgtgacgcgcaac
aacatggaggcggccgaggagatcgtccgccagctccggctgcgcgacatcggcggcatc
atcgtcatcgacttcatcgacatggtgctcgagagcaaccgcgacctcgtgctgcggcgg
ctgaccgagtgcctgggccgggaccgcaccaagcaccaggtcgccgaggtcacctcgctg
ggtctggtgcagatgacccgcaagcgggtcggccaggggctgctcgaggtcttctccgag
tcctgcgagcactgccgcgggcgcggcatcctcgtgcacctcgacccggtcgacgagaag
cgtcgcggcgggggcaacggcggcggttccggatccgggaccggtggcgggaaggacgct
gccgcgaaggattccgggaaggagtccggcggcggccgcaaccgcggcaacggcggcggc
ggcggcaaggacactgccaaggacaccgcgaaggacaccgcgaaggacaccgcgaaggac
agcgagaaggacaccgccagggacagcgagaaggacgtcgagaaggacaccgccgaggag
accgccgacaccggcgccgccgacgtggcgtccggtgagggcgacgcgcccgagggcggc
cgcggcggtggccgccgcaaccgcggccggcgcaaccgcgggcagtcgggggaggaccgc
gcggccgaggacgccgcggtgctcgccggcgcgcgggccgacgacgggacgccggccggg
cagcccgtggccgacggctccgccgaggcggtcacggacgtcgccccgtccacggcgccg
atgccgccggtcgccgcaccgcccgcggagtcgcagcaggaggcgccggccggaacgggg
acggccccggcggcccggcccgcacggaagggcggccggccggtgacgaccgtcgagccg
ctgcccgcgagcgccccggtcccggtggcgtccgcggagatcgaggccgacgacgtgctg
ccggccggcgaggtcgccgcggtggaggcgccggagcaggacgcgatgccgatcaccccg
gccacgacggccgccgacgtcgtccccggtggggtcgcgcacgacgccgacgccggcgcc
cctgccgacgccccggcgcccgcgcagacccccgcggccgacggggaggcgcccgcccgt
ccgcgccgccggcgggcagccagccgcccggcgggcccgcccgcctga
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