Blastococcus montanus: ABDB74_16405
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Entry
ABDB74_16405 CDS
T10593
Name
(GenBank) RtcB family protein
KO
K14415
tRNA-splicing ligase RtcB (3'-phosphate/5'-hydroxy nucleic acid ligase) [EC:
6.5.1.8
]
Organism
bmon Blastococcus montanus
Brite
KEGG Orthology (KO) [BR:
bmon00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
bmon03016
]
ABDB74_16405
Enzymes [BR:
bmon01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.8 3'-phosphate/5'-hydroxy nucleic acid ligase
ABDB74_16405
Transfer RNA biogenesis [BR:
bmon03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing ligase complex
ABDB74_16405
Prokaryotic type
tRNA splicing ligases
ABDB74_16405
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RtcB
Motif
Other DBs
NCBI-ProteinID:
XAW55269
LinkDB
All DBs
Position
3454577..3455764
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AA seq
395 aa
AA seq
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MERLSDKLLNWASILDVETLKQAERTASLDIVHPHVALMPDAHLGKGATVGSVLPTKAAI
IPAAVGVDIGCGMIAVRTPWSVDEVRARGPLAPLRGDIERTVPLSAGRYNKKLTETARPR
VAELEATADELGDNVLRSVTATAPNWPMQLGSLGSGNHFIEVTADEQDRVWLFLHSGSRG
VGNKIAQTHIAIAQDRARRDGLDLPDRDLAWLDEGTPEFDRYVAELRWAQHFALLNREEM
MDRVADCLARHMRADATPELERINCHHNFSQHEKHFGDELWVSRKGAIQAEKGQAGLIPG
SMGTASYVVTGLGNPESLESSPHGAGRVFSRTRARKTFTRAQLDESMRGIEWRHSDAFLD
EIPAAYKDVDVVMADAADLVEVRHTLRQLVNVKGD
NT seq
1188 nt
NT seq
+upstream
nt +downstream
nt
gtggagagactctcggacaaactgctgaactgggcgagcatcctcgacgtcgagacgctg
aagcaggccgagcgcacggcctccctcgacatcgtgcacccgcacgtggcactgatgccc
gacgcccacctgggcaagggggccaccgtcggctcggtgctgccgacgaaggcggcgatc
atcccggcggcggtcggcgtcgacatcggctgcggcatgatcgccgtccgcacgccgtgg
tcggtggacgaggtgcgagcccggggcccgctggcgccgctgcgcggcgacatcgagcgc
accgtccccctgtcggccggccggtacaacaagaagctgaccgagacggcccggccccgg
gtcgccgagctcgaggccacggccgacgagctgggcgacaacgtcctgcggtcggtcacc
gcgacggcgccgaactggccgatgcaactcggcagcctgggttcgggcaaccacttcatc
gaggtgaccgccgacgagcaggaccgcgtctggctcttcctgcactcgggcagccgcggg
gtcggcaacaagatcgcgcagacgcacatcgcgatcgcccaggaccgtgcccgccgcgac
gggctcgacctgcccgaccgcgacctggcctggctcgacgagggcaccccggagttcgac
cggtacgtcgccgagctgcggtgggcgcagcacttcgccctgctcaaccgcgaggagatg
atggaccgggtcgccgactgcctggcccggcacatgcgcgccgacgcgacgccggagctg
gaacggatcaactgtcaccacaacttcagccagcacgagaagcacttcggcgatgagctg
tgggtctcccggaagggcgcgatccaggcggagaaggggcaggccggcctcatccccggg
tcgatggggacggcgagctacgtggtcaccgggctcggcaatcccgagtcgctggagtcg
tccccgcacggggccgggcgggtgttctcgcggacgagggcgaggaagacgttcacccgg
gcccagctggacgagtcgatgcgcggcatcgagtggcggcacagcgatgcgttcctcgac
gagatccccgcggcctacaaggacgtggacgtcgtcatggccgacgccgctgatctcgtg
gaggtccggcacacgctgcggcagctggtcaacgtgaagggcgactga
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