Blastococcus montanus: ABDB74_18135
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Entry
ABDB74_18135 CDS
T10593
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
bmon Blastococcus montanus
Pathway
bmon03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
bmon00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
ABDB74_18135
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bmon03021
]
ABDB74_18135
03400 DNA repair and recombination proteins [BR:
bmon03400
]
ABDB74_18135
Enzymes [BR:
bmon01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
ABDB74_18135
Transcription machinery [BR:
bmon03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
ABDB74_18135
DNA repair and recombination proteins [BR:
bmon03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
ABDB74_18135
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Motif
Other DBs
NCBI-ProteinID:
XAW55602
LinkDB
All DBs
Position
complement(3792638..3796543)
Genome browser
AA seq
1301 aa
AA seq
DB search
MLDVNFFDELRIGLATGDDIRQWSHGEVKKPETINYRTLRPEKDGLFCEKIFGPTRDWEC
YCGKYKRVRFKGIICERCGVEVTRAKVRRERMGHIELAAPVTHIWFFKGVPSRLGYLLDL
APKDLEKIIYFAAYMITSVDDEARHRDLPTIEAEISAEKSNLEGQRDANVEARQQKLEAD
LAELEAEGAKSDVRRKVREGGEREMRQLRDRSQREIDRLDEVMDTFRKLEVKQLIADEGL
YRELRDRFGEYFEGGMGAAALQKLLAGFDLDAEAVSLRETIRSGKGQRKLRALKRLKVVA
AFQQTRNSPMGMVLDCVPVIPPDLRPMVQLDGGRFATSDMNDLYRRVINRNNRLKRLLDL
GAPEIIVNNEKRMLQESVDALFDNGRRGRPVTGPGNRPLKSLSDLLKGKQGRFRQNLLGK
RVDYSGRSVIVVGPQLKLHQCGLPKQMALELFKPFVMKRLVDLNHAQNIKSAKRMVERAR
PVVWDVLEEVITEHPVLLNRAPTLHRLGIQAFEPQLVEGKAIQIHPLVCTAFNADFDGDQ
MAVHLPLSAEAQAEARILMLSSNNILSPADGRPITAPTQDMVLGLYHLTTLVASPLEADG
GQPRAFSSAAEAVMAYDKGDLALQERAWIRLDEVYGVDNGAVNDPWEQPEDWTPGAPAIV
QTSLGRVLFNEALPEDYRFVNYQVPKKELGAIVNDLAERYPKVQVAATLDALKSAGFHWA
TRAGITIAIDDVVTPPAKQEILDRHEAEAAKIEKQYERGVITDAERRGELIEIWTRARAE
VSQAMVDNFPTTNPVWVMVNSGARGNMMQISQIAGMRGLVANPKGEIIPRPIKANFREGL
SVLEYFISTHGARKGLADTALRTADSGYLTRRLVDVSQDVIIREEDCGTDRGVLMPIGTV
VDGRVTRDAHVETSVYARALAADVVAEDGTVIAQANSDLGDVLIQALIDAQVSEVKVRCV
LTCESLLGTCATCYGRSLATGKLVDVGEAVGIIAAQSIGEPGTQLTMRTFHTGGVAGEDI
THGLPRVVELFEARVPKGKAPIAELAGTVRIEDGEQFRKLTITPDDGSDEVVYDKLSRRS
RLRVEDGAHVEVGEQLTEGAVDPHEVLRIMGPREVQLHLVREVQEVYRSQGVSIHDKHIE
VIIRQMLKRVTIIDSGATEFLPGALVERTIFETENRRVVAEGGEPASARPVLMGITKASL
ATESWLSAASFQETTKVLTDAAIQGKSDSLLGLKENVIIGKLIPAGTGISRYRNITVEPT
EEARAAVYTMAGYEDGQYYSPDVFGQGTGEAVRLEEYDWRG
NT seq
3906 nt
NT seq
+upstream
nt +downstream
nt
ttgctcgacgtcaacttcttcgacgagctccgcatcggcctggccaccggcgacgacatc
cgccagtggtcgcacggtgaggtgaagaagcccgagaccatcaactaccggaccctgcgt
ccggagaaggacggtctcttctgcgagaagatcttcggtcccacccgggactgggagtgc
tactgcggcaagtacaagcgggtccggttcaagggcatcatctgcgagcgctgcggcgtc
gaggtgacccgcgccaaggtccgccgtgagcggatgggccacatcgagctggccgcgccg
gtcacccacatctggttcttcaagggggtgccgtcgcggctgggctacctgctcgacctg
gcgcccaaggacctcgagaagatcatctacttcgcggcctacatgatcacctcggtcgac
gacgaggcgcgccaccgcgacctcccgaccatcgaggccgagatcagcgcggagaagtcc
aacctcgagggtcagcgggacgccaacgtcgaggcgcgccagcagaagctcgaggccgac
ctggccgagctcgaggccgagggcgccaagtccgacgtccgccgcaaggtgcgcgagggc
ggcgagcgcgagatgcgccagctgcgcgaccgctcccagcgggagatcgaccgcctcgac
gaggtgatggacaccttccgcaagctcgaggtcaagcagctcatcgccgacgagggcctc
taccgggagctgcgcgaccgcttcggtgagtacttcgagggcggcatgggcgccgcggcg
ctgcagaagctgctcgccggcttcgacctggacgccgaggccgtctccctgcgcgagacg
atccgcagcggcaagggccagcgcaagctgcgggcgctcaagcggctgaaggtcgtcgcg
gccttccagcagacccgcaactcgcccatgggcatggtgctggactgcgtcccggtcatc
ccgccggacctgcgcccgatggtgcagctcgacggtggccgcttcgccaccagcgacatg
aacgacctgtaccgccgcgtgatcaaccggaacaaccggctgaagcgactgctcgacctg
ggcgcccccgagatcatcgtgaacaacgagaagcggatgctccaggagtccgtggacgcg
ctgttcgacaacggccgtcgcggccggccggtcaccggtccgggcaaccgtccgctgaag
tccctgagcgacctgctcaagggcaagcagggccggttccgccagaacctgctcggcaag
cgcgtcgactactccggccgttcggtcatcgtcgtcggcccgcagctgaagctgcaccag
tgcggcctgcccaagcagatggcgctggagctgttcaagcccttcgtgatgaagcggctg
gtcgacctcaaccacgcgcagaacatcaagtccgccaagcggatggtcgagcgcgcccgc
cccgtcgtctgggacgtgctggaagaggtcatcaccgagcacccggtcctgctgaaccgg
gcgccgacgctgcaccgcctgggcatccaggccttcgagccgcagctggtcgagggcaag
gccatccagatccacccgctcgtctgcaccgcgttcaacgcggacttcgacggtgaccag
atggcggtgcaccttccgctgtcggccgaggctcaggccgaggcccggatcctgatgctg
tccagcaacaacatcctgagcccggccgacggtcgtccgatcaccgcgccgacccaggac
atggtgctgggcctgtaccacctgacgaccctggtggcctcgccgctggaggccgacggt
ggccagccgcgtgccttctcgtcggccgccgaggccgtcatggcctacgacaagggtgac
ctggcgctgcaggagcgcgcctggatccggctcgacgaggtctacggcgtcgacaacggt
gcggtcaacgatccgtgggagcagccggaggactggacgccgggcgcccccgcgatcgtg
cagaccagcctgggccgggtgctgttcaacgaggccctgcccgaggactaccgcttcgtc
aactaccaggtgccgaagaaggagctcggggcgatcgtcaacgacctcgccgagcgctac
cccaaggtgcaggtcgcggcgacgctggacgccctcaagtcggccggtttccactgggcc
acccgcgcggggatcacgatcgccatcgacgacgtggtcaccccgccggccaagcaggag
atcctggaccggcacgaggccgaggccgccaagatcgagaagcagtacgagcgcggcgtc
atcaccgacgccgagcgtcgtggcgagctgatcgagatctggacccgcgcgcgggccgag
gtctcccaggcgatggtggacaacttcccgaccaccaaccccgtctgggtcatggtcaac
tcgggtgcccgaggcaacatgatgcagatcagccagatcgccggtatgcgtggtctggtc
gccaacccgaagggcgagatcatcccgcggccgatcaaggccaacttccgggagggtctg
tcggtgctggagtacttcatctccacgcacggtgcccgcaagggtctggccgacacggcg
ctgcggaccgccgactccgggtacctcacccgtcgtctggtggacgtctcgcaggacgtc
atcatccgcgaggaggactgcggcaccgaccgcggcgtcctcatgccgatcggcaccgtg
gtcgacggccgggtcacccgtgacgcccacgtggagaccagcgtctacgcccgcgccctg
gccgccgacgtggtggccgaggacgggacggtcatcgcgcaggccaactccgacctgggt
gacgtgctgatccaggcgctgatcgacgcccaggtgtccgaggtcaaggtccggtgcgtc
ctgacctgcgagtcgctgctcggcacctgcgccacctgctacggccggtccctcgcgacc
ggcaagctcgtggacgtcggcgaggcggtcggcatcatcgccgcccagtcgatcggtgag
cccggcacccagctgacgatgcgcaccttccacaccggtggtgtcgcgggtgaggacatc
acccacggtctgccgcgtgtggtggagctcttcgaggcccgcgtccccaagggcaaggcg
ccgatcgccgagctggcgggcaccgtccggatcgaggacggcgagcagttccgcaagctg
acgatcaccccggacgacggctcggacgaggtcgtctacgacaagctgtcgcgccggtcg
cggctgcgggtcgaggacggcgcgcacgtcgaggtgggggagcagctgaccgagggtgcg
gtcgacccgcacgaggtgctgcggatcatgggcccgcgcgaggtgcagctgcacctcgtc
cgcgaggtccaggaggtctaccgctcgcagggtgtgtcgatccacgacaagcacatcgag
gtgatcatccgccagatgctgaagcgggtgaccatcatcgactcgggcgcgacggagttc
ctgcccggtgcgctggtcgagcggacgatcttcgagacggagaaccgccgcgtcgtcgcc
gagggcggcgagccggcctcggcccgtccggtcctgatgggcatcaccaaggcctcgctc
gcgaccgagtcgtggctgtcggccgcctccttccaggagacgaccaaggtgctcaccgac
gccgcgatccagggcaagagcgacagcctgctggggctcaaggagaacgtgatcatcgga
aagctgatcccggcgggtacgggcatcagccgctaccggaacatcacggtcgagcccacc
gaggaggcgcgcgccgcggtctacacgatggccggctacgaggacgggcagtactacagc
ccggacgtcttcgggcagggcaccggcgaggccgtgcggctcgaggagtacgactggcgg
ggctga
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integrated database retrieval system
