Bombyx mori (domestic silkworm): 100379187
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Entry
100379187 CDS
T02817
Symbol
COPB2
Name
(RefSeq) coatomer protein complex subunit beta 2
KO
K17302
coatomer subunit beta'
Organism
bmor
Bombyx mori (domestic silkworm)
Brite
KEGG Orthology (KO) [BR:
bmor00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
bmor04131
]
100379187 (COPB2)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
bmor04147
]
100379187 (COPB2)
Membrane trafficking [BR:
bmor04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
Coat protein complex I (COP-I)
100379187 (COPB2)
Exosome [BR:
bmor04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
100379187 (COPB2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
B-prop_COPA_B_2nd
TPR_COPA_B
WD40
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_EML_2
WDR55
WD40_CDC20-Fz
EIF3I
Beta-prop_WDR75_1st
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_C
Beta-prop_EML
Beta-prop_EIPR1
Beta-prop_RIG_2nd
WD40_MABP1-WDR62_1st
NBCH_WD40
WDR90_beta-prop_4th
Beta-prop_SCAP
Beta-prop_IFT140_1st
Beta-prop_HPS5
Beta-prop_IFT122_1st
Beta-prop_SPT8
Beta-prop_DCAF4
Beta-prop_LRRK2
HEAT_GCN1
Motif
Other DBs
NCBI-GeneID:
100379187
NCBI-ProteinID:
NP_001166610
UniProt:
D2Y4R4
LinkDB
All DBs
Position
1:complement(19797370..19814601)
Genome browser
AA seq
935 aa
AA seq
DB search
MPLRLDIKRKLTARSDRVKCVDQHPSEPWLLCSLYSGDVNIWNYETHAQIKRFEVCDLPV
RSAKFVPRKNWVITGSDDMQIRVFNYNTLERVHSFEAHSDYVRCIAVHPTQPYILTCSDD
LLIKLWNWDRNWTCQQVFEGHTHYVMQIVINPKDNNTFASASLDTTVKVWQLGASISNFT
LEGHEKGVNCVDYYHGGDKPYLISGADDRLVKIWDYQNKTCVQTLEGHVQNVSAVSFHPE
LPILLTGSEDGTLRIWHAGTYRLKSSLNYGFERVWTISTMHGSNNVAVGYDEGTIMIKVG
REEPAISMDVNGGKIICAKHSELQQVNLKALPEGTEIKDGERVPVVAKDMGSCEIYPQTI
AHNPNGRFMVVCGDGEFIIYTAMALRNKAFGTAQEFVWAFDSSEYATLENSSSVKVFKNF
KERKSFKPEYGAEGIFGGYMLGVKSISGVAFSFYDWEHLELVRRIEIQPRHVFWSESGNL
VCLATDETYFILKYNAAVVTRARETNTDITEDGIEDAFEVVGEVNETVKTGIWVGDCFIY
TNTLNRINYYVGGEIVTVAHLDHTMYILGYVAKENRLYLNDKELNIVSYSLLLSVLEYQT
AVMRGDFETADRVLPTIPTEHRTRVAHFLEKQGFKQQALAVSTEPDHQFELALALGELER
AKQLAEEAGLAEGVASRSSAARWSRLGSAAAAAAQTELTKTCYHNAHDYSALLLFAVSTG
DKPLLQEVARMSSESGDDNIAFVAHFTLNDLDRCLELLISRNKLPEAAFFARSYIPSKIC
EVVKMWRESVGATNKKSGQSLADPVNYENLFPEYNESLELEYFQREFGYEQSTAMEAVEP
NSKITNTERDIAAEYAEAKRRGPLNIPPLLNHNQIQDSEGDSREDATNGNTTSESQQKRK
ISIDIMEEIEREFGEIEFENHVDNDDLSDVEDLIG
NT seq
2808 nt
NT seq
+upstream
nt +downstream
nt
atgcctctgcgtctggatatcaagaggaagctgacggcgcggtcggaccgagtgaaatgc
gtcgaccagcacccgtcggaaccctggctgctctgctccctgtattcaggagacgttaac
atatggaattatgagactcacgctcaaattaagagatttgaggtatgtgatctcccggtg
agatcagcaaagtttgttccccggaagaactgggtgataactggctcagatgacatgcag
atacgtgtattcaactacaacaccctggagagggttcactcatttgaagcacattcggat
tatgtgcgatgcatagccgttcatcccacacaaccgtacatattgacttgcagtgatgat
ctcctaatcaaattgtggaactgggaccgtaattggacatgtcagcaagtattcgaaggg
catacgcattacgtaatgcagatcgttatcaacccgaaggataacaataccttcgcaagc
gcaagtctcgacactactgtgaaggtttggcaacttggtgcttctatatcgaacttcact
ttagaaggtcacgagaaaggcgtcaactgcgtggactattatcatggcggtgacaagccc
tacctcatcagtggagctgatgacaggctcgtcaaaatatgggattaccaaaataagaca
tgtgtacaaacattggaaggtcatgttcagaatgtatcagcagtatcattccaccccgag
cttccgatcctgctgaccggttctgaagacggcaccctcagaatatggcacgcaggcacc
tacaggctcaagtcttccctaaattatggtttcgaaagagtatggacgatatccaccatg
cacggttcgaacaacgtcgctgtagggtatgacgaaggtacgataatgataaaagtgggc
agagaagagcctgctatatctatggacgtgaacggaggaaagattatctgtgctaagcac
tctgaattgcagcaggtcaacttgaaggctctccctgaaggcacagaaataaaggacgga
gagcgtgtaccagtcgttgctaaagacatgggctcctgcgagatatacccacaaacgata
gcccacaatccgaacggtagattcatggtggtgtgcggtgatggtgagttcatcatatac
accgcgatggctctgaggaacaaggcgttcgggacggcccaggagtttgtatgggcattc
gacagctcagagtatgcgactctagagaattcatcttcagtcaaagtcttcaagaatttc
aaggagagaaaaagcttcaagcccgagtacggtgctgaaggtatattcggaggctacatg
ctcggcgtgaagtctatcagcggagtagcattctcgttctacgattgggaacatttggaa
cttgtcagacgtattgagattcagcctcgtcacgtgttttggtccgaaagcgggaacctt
gtgtgtttggctaccgatgaaacatacttcatcctgaagtacaacgctgccgttgtgacc
agagcaagggagactaataccgacattactgaggatggaattgaagatgcgtttgaggta
gttggtgaagtcaacgaaacagtgaagacaggcatatgggtcggagattgcttcatatat
accaacacactgaacaggataaactactacgttggcggtgagattgtcacggttgcgcat
ctcgaccacactatgtacatactgggatacgttgctaaggagaacagattatacctaaac
gacaaagagttaaacattgtttcttattcattactactatctgtgctggagtaccagaca
gcagtgatgcggggcgattttgagactgccgatcgtgtcctacccacaattcctaccgag
catcgaacaagggtcgcacatttcttagaaaagcagggattcaaacaacaagccctagcg
gtttccacggagccggatcaccagttcgagctggcgttagcgttgggagaactggagcga
gccaagcagctggctgaggaggcaggcctggctgaaggtgtggcgtccaggtcctctgct
gccaggtggtcaagattgggttccgccgccgctgctgcagcccaaactgaacttaccaaa
acttgttatcacaatgcgcacgattacagtgcgttactactctttgccgttagcactggc
gacaagccactgctacaggaagtggcacgaatgtccagtgaatctggagacgataacatc
gcgttcgtagctcacttcacactgaacgacctggaccgctgtcttgagcttctcatatcc
agaaataagctgcccgaagccgcattctttgccagatcatacattccgtctaaaatatgc
gaagtggtgaagatgtggcgcgaatcagttggtgccacgaacaagaaatccggtcagtca
ttagccgacccggtcaactatgagaatctgtttccggaatacaatgaatcgttagagctc
gaatacttccaacgcgaattcggttacgaacagagcaccgccatggaggccgtcgagccg
aattcaaagatcacgaatacggaacgagacatcgccgcggaatacgccgaagcgaaacga
cgagggcccctcaacataccgccgctactcaatcacaatcaaatacaagattctgaaggg
gacagcagagaggatgcgacaaatgggaacacgacgagcgaaagtcaacagaaacgtaaa
atttcaatcgacatcatggaggagatagaacgggaattcggtgaaatcgaattcgaaaac
cacgtcgataacgatgacctctcggacgtagaagacttaatcggctaa
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