Bombyx mori (domestic silkworm): 100462719
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Entry
100462719 CDS
T02817
Symbol
Rad4
Name
(RefSeq) nucleotide excision repair protein
KO
K10838
xeroderma pigmentosum group C-complementing protein
Organism
bmor
Bombyx mori (domestic silkworm)
Pathway
bmor03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
bmor00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
100462719 (Rad4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bmor03400
]
100462719 (Rad4)
DNA repair and recombination proteins [BR:
bmor03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
XPC-HR23B-CETN2 complex
100462719 (Rad4)
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
BHD_3
Rad4
BHD_1
BHD_2
Motif
Other DBs
NCBI-GeneID:
100462719
NCBI-ProteinID:
NP_001177140
UniProt:
D7F7K9
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Position
13:8834434..8845108
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AA seq
961 aa
AA seq
DB search
MPVTRKKVIKTVYKHEDSDEETGDFSDSGSEAHISDVPSSEDEAEELPETSEDEFVTKTK
KNATKPKPSKKPFAKRLISKINKQSLEMENTSPTIFTVKDLTDEDKLLPPILNLSESDSN
DEETPKVAVKKFTPPIADVREQTTDSDEGSQMNYKDVWSQNVDQSEEIAKKAFMELEQHK
NKIEEVKESIQNYKDIKEEKISDKHKEDSEKKSNSKKPSKPKIPQVDGNDDDENIFQNIM
QVDGNDDILGVKTRSTRSARAGNVNSLKNKEDTEDDLPQKRLKKDPEQSTQNPSRGDRKQ
TNRSLKGVNSKHGNPTNVLIDENNDNIAMKRSTKLLPNRAIKSIISDKSDGKEKDKTPKE
NASSKPQSCKIVPKLELEITKRTLANAKPAKRKAIKDIPLVSDENKKSVSSKYFQTNTAT
VDEKKSRTCRKRSHTFESNKTNKNNSLDVKEKVTKARTKSAINEVEKSKYFCDTEIESKR
SKVTRHTRSNNVQVKPEQRVSHRDLKKISDKSKNDVTEDLVTIIKSRIKEAKSDSNKLRS
KAKKIKEESDSDSDLLPEEEVRKNIPESDDDFKPPKISPRPSTSKKIDRRVLSSDDEKPK
NKIDIWCEIFAEELEQWICVDVVSGKIHDTDTIYTRATHPVCYIVGWDNNNYLKDLTRKY
VPHYNTVTRKLRAELDWWEKALSPWVGPKTARDKEEDEYINKMQLEAPLPKSIAEYKNHP
LYALKRHLLKFEAMYPSDAATLGFVRGEAVYSRDCVYVCRSRDLWLKEAKVVKLGEKPYK
IVKARPKWDKLSNTLIRDKVLELYGPWQVQDYEPPVAEDGIVPRNAYGNVELFKECMLPK
GTVRIKLPGLNKVARKLNIDCAPAMTGFDYDGGWCHPVYDGFVVCKEFEGVLTEAWVQEQ
EEQEKREREKTEARVYGNWKKLIRGLLIRERVKDKYGFEKLSASQPTKGKGKAPRFVVKK
K
NT seq
2886 nt
NT seq
+upstream
nt +downstream
nt
atgccggtaacaagaaagaaggttataaaaacagtgtacaaacatgaagatagtgatgaa
gaaaccggtgattttagtgactcagggtcagaagcgcacatttctgatgtgccaagctct
gaagatgaagctgaggaattaccagaaacgtctgaagatgaatttgtcacaaaaaccaaa
aagaacgccacgaaacctaaaccatcgaagaaaccgttcgccaaaagattaattagcaaa
ataaataaacaatctctcgaaatggaaaatacatctccaacgatcttcacagttaaagac
cttacagatgaagataaacttcttccacccatactcaatttatctgaaagtgatagtaat
gatgaagaaactccaaaggtagctgtgaaaaaattcacacctccaatagctgatgtcaga
gaacaaaccactgacagtgatgaaggctctcaaatgaattacaaagatgtttggtcacaa
aatgttgatcagagtgaggaaatagcaaagaaggccttcatggagcttgaacaacacaaa
aataaaatagaagaggtgaaagaatcaatacaaaactacaaagatattaaggaagaaaaa
atatctgataaacacaaagaagatagcgaaaaaaaatctaattctaaaaaaccatcaaaa
ccgaaaattccgcaagtggatggaaatgacgatgatgaaaatatatttcaaaacataatg
caagttgatggtaatgatgacatccttggcgtcaaaaccagaagtacgagatctgcaaga
gctggtaatgtcaattctcttaaaaataaagaagacactgaagatgatttacctcaaaaa
cgattaaaaaaagaccctgaacagtctacacaaaatccttcccgaggtgatagaaagcag
actaatagatcattaaaaggtgtaaacagtaaacatggaaaccctacaaacgttttgatt
gatgaaaataatgataatattgcaatgaaaagatctacaaagctgttaccaaatcgagca
attaaatcaatcatcagtgacaaatcagatggtaaagaaaaagacaaaacaccaaaagaa
aatgcttcttcaaaaccacaaagctgcaaaattgtacctaaacttgaattagaaattaca
aaaaggactctagcgaatgcaaaaccagccaaaagaaaagcaataaaagatattcccctt
gtgtctgatgaaaacaaaaagtcagtttccagcaaatattttcaaactaacacagctact
gttgacgaaaagaaaagcaggacttgtaggaaaagatcgcacacctttgaatctaataaa
acgaataaaaataacagtttggatgttaaggagaaggtcactaaagcaaggacgaaaagt
gcaattaatgaagtagaaaaaagcaaatacttttgtgatacagaaatagaaagtaaacga
tctaaagtaaccagacatacaaggtcaaacaatgttcaggtcaaacctgagcaaagagta
agtcatagagatctaaagaaaataagtgataaatctaaaaatgatgtcactgaggacctt
gtgacaataataaaaagcagaataaaagaagctaagagtgactcaaataagttgagatca
aaagcaaaaaaaataaaagaagaatcagatagtgacagtgacctattaccagaagaggaa
gttcgcaaaaatataccagaaagtgatgatgatttcaaaccacctaaaattagtcctcga
cccagtacaagtaagaaaatagatcgtcgtgtactttcctcagatgatgaaaaacctaaa
aacaaaatcgacatttggtgtgagatttttgctgaagaacttgaacaatggatatgtgtt
gatgttgttagtggaaaaatacatgacacagatacaatttatactcgtgctacgcacccg
gtgtgctatattgttggctgggacaacaacaattatttgaaagacttgactagaaaatac
gtgcctcactataatacggtgacgcgaaaattacgagccgaactggattggtgggaaaaa
gctctaagcccgtgggttggacctaagactgcacgggacaaagaagaagatgaatatata
aataagatgcaacttgaagcacctttgccgaaaagtattgccgagtacaagaatcatcct
ctgtatgctctaaaaagacacttattgaagttcgaagctatgtatccatcagacgcggca
acattaggattcgtacgcggcgaagcggtatactccagggactgcgtgtacgtatgtaga
tcacgagatctgtggcttaaagaggccaaagttgtcaaacttggtgaaaaaccttacaaa
attgtgaaagcgcggccgaaatgggataaattatcaaatacattaatcagagataaagtt
ctggaattgtatggaccatggcaggttcaagactatgaaccacctgtagctgaagatgga
atagtgcctcggaatgcttatggaaatgtagaactgttcaaggaatgcatgttacctaaa
ggaacggtgcgaattaaattacctggcttaaataaagtggcgagaaaattgaacatagac
tgtgcaccagcgatgaccggcttcgactacgacggtggctggtgtcatcctgtttacgac
ggctttgttgtttgtaaagagtttgagggagtgctcacagaagcctgggtccaggaacaa
gaagaacaggaaaaacgtgaacgcgaaaaaaccgaagccagagtctatggaaattggaag
aagttaatcagaggtttgctcatacgagaaagggtcaaagataaatatggtttcgaaaaa
ctcagtgcgtcccaaccaacaaaaggtaaaggaaaagcacctcgatttgttgtaaagaaa
aaatag
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