Bombyx mori (domestic silkworm): 101735809
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Entry
101735809 CDS
T02817
Name
(RefSeq) probable ATP-dependent RNA helicase pitchoune
KO
K13179
ATP-dependent RNA helicase DDX18/HAS1 [EC:
5.6.2.7
]
Organism
bmor
Bombyx mori (domestic silkworm)
Brite
KEGG Orthology (KO) [BR:
bmor00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
bmor03041
]
101735809
03009 Ribosome biogenesis [BR:
bmor03009
]
101735809
Enzymes [BR:
bmor01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
101735809
Spliceosome [BR:
bmor03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
101735809
Ribosome biogenesis [BR:
bmor03009
]
Eukaryotic type
90S particles
Helicases
101735809
Pre-60S particles
101735809
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
CTE_SPB4
ResIII
AAA_30
DUF8305
Motif
Other DBs
NCBI-GeneID:
101735809
NCBI-ProteinID:
XP_004930620
UniProt:
A0A8R1WJK8
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All DBs
Position
6:complement(8831802..8841735)
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AA seq
617 aa
AA seq
DB search
MPTPDKILLRKIRKREKRKLKLTSQKTDSNPEPEKDIEALNNEKEAKKRVVQDGDTNGKV
PKKKLKKVKEELKEEPVEVKSEEESSDDSQDEQDTKEDDSEKKSNNDLPGSSLCLGILSD
QKFTALEGTVCEPTLLGIKDMGFITMTEIQAKAIPPLLEGRDLVGAAKTGSGKTLAFLIP
AIDLIYKLKFKPRNGTGVIILSPTRELSMQTFGVLMELMKYHHHTYGLVMGGANRSTEAQ
KLSKGINILVATPGRLLDHLQNTPDFLYKNLQCLVIDEADRILEIGFEEEVKQIIKLLPK
RRQTMLFSATQTKKTEALTALALKHEPVYVGVDDHREQATVDSLEQGYIVCPSEKRMMVL
FTFLKKNRKKKVMVFFSTCMSVKYHHELFNYIDLPVMSIHGKQQQTKRTTTFFQFCNAES
GILLCTDVAARGLDIPAVDWIVQYDPPDDPKEYIHRVGRTARGLGTSGHALLFLRPEELG
FLRYLKQSRVTLNEFEFSWNKVADIQLQLEKLISRNYFLNQSAKEAFKSYLRAYDSHHLK
TIFDIDTIDLAKASKSFGFNVPPAVELKVANKGPPQKRKGGGGYGYFKSLNAPSDFKRKT
DKTKIYRQKGNNKKTIS
NT seq
1854 nt
NT seq
+upstream
nt +downstream
nt
atgccgacaccagataaaatacttctcagaaaaataagaaaacgagaaaaacgaaaactg
aaacttacatctcaaaaaactgattcaaatcctgaaccagaaaaagatattgaagcatta
aataatgaaaaagaagctaagaagagagttgtacaagacggtgacacaaatggaaaagtt
cccaaaaaaaaattgaaaaaggttaaagaagagttaaaagaagaaccagttgaagtaaaa
tctgaggaagaatctagtgatgactctcaagatgagcaagacactaaagaagatgattcg
gaaaaaaaatcgaacaacgatttacctggatcaagcctctgcttaggtatactatcagat
caaaaattcactgcactggaaggcacagtgtgcgaaccaactcttttaggaattaaagat
atgggctttataacgatgacagagattcaagctaaagctatacctcctttgttggaaggc
agggatcttgtgggtgctgccaaaactggctctggaaaaacactagcattcttaataccg
gctatagaccttatatacaaattaaaatttaaaccaagaaatggtactggagtcatcatt
ttgtcacccacaagagagttatcaatgcaaacatttggcgttctcatggaattgatgaaa
taccaccaccatacatatggtctggtaatgggtggtgcaaacagaagtactgaagctcag
aaactctctaaaggtatcaacattttagttgctactcctggacgtttactggatcacttg
caaaatacaccagacttcttgtataagaaccttcagtgcttagttattgatgaggctgac
aggatattggaaattggatttgaagaagaagttaaacagatcataaaattgctgccaaaa
cgccggcaaactatgttattcagtgctacacaaacaaagaagactgaagcactaactgct
ttggcattgaagcatgaacccgtgtatgttggggttgatgaccacagagaacaggcaact
gttgatagtttagaacagggatatatcgtatgcccatcagagaaacgtatgatggtttta
ttcacattccttaagaagaatagaaaaaagaaggttatggtattcttttcaacctgtatg
tctgtcaaataccaccatgaacttttcaattatattgaccttcctgtgatgtccatacat
ggaaaacaacaacaaacgaagcgtacaacaacattcttccagttttgcaatgctgaatct
ggtatactactttgtactgatgtcgcggcgcgtggtctggacattccggccgttgattgg
attgtacagtatgatcctccagatgatccaaaggaatacatccatcgggttggaagaact
gcgaggggtctaggaactagtggacacgctttgttattcttacgtccagaagagcttgga
ttcttacgatacttaaagcagtcgagagttaccctaaacgaatttgaattctcatggaat
aaagttgcagatatacaactacagctagaaaaacttatctctcgaaactatttcctgaat
caatctgcaaaagaagccttcaaaagttacctgagagcctatgattctcatcacttgaaa
acgatttttgacattgatacaatcgatttagctaaggcatcgaaatcatttggtttcaat
gtaccgcccgctgtagaactaaaagtcgcaaacaaaggacctccacagaaaagaaaggga
ggtggtggttatggatacttcaagtccttaaacgctccatccgatttcaaaaggaagaca
gataaaacgaaaatatacagacaaaaggggaacaataagaaaacgatcagttga
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