Bombyx mori (domestic silkworm): 101736021
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Entry
101736021 CDS
T02817
Name
(RefSeq) ATP-dependent DNA/RNA helicase DHX36 isoform X1
KO
K14442
ATP-dependent RNA helicase DHX36 [EC:
5.6.2.6
]
Organism
bmor
Bombyx mori (domestic silkworm)
Pathway
bmor03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bmor00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
101736021
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bmor03019
]
101736021
03012 Translation factors [BR:
bmor03012
]
101736021
Enzymes [BR:
bmor01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
101736021
Messenger RNA biogenesis [BR:
bmor03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
101736021
Translation factors [BR:
bmor03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
101736021
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Helicase_C
DEAD
HA2_N
OB_NTP_bind
HA2_C
nSTAND3
AAA_19
Cas3-like_C_2
AAA_11
RsgA_GTPase
AAA_22
NPHP3_N
ABC_tran
Motif
Other DBs
NCBI-GeneID:
101736021
NCBI-ProteinID:
XP_037877355
LinkDB
All DBs
Position
3:complement(8502240..8513840)
Genome browser
AA seq
1134 aa
AA seq
DB search
MHKKHLIFHGIINIFFKMPRRYNSFDRFDRPRPPKSGLRGKEIGMYYKALSIEKGKKNKK
NNVIRFKIPPSIVSSLYSNLASIEKLAKGLNICIKPIEKLTIAETPKGLKPELSLHEAMY
MNTSTAENKNSVQASDNENLFEAKTPLTDFKKLEDISMISEDAELRSPSDVDNKSNGIPV
FGSIQKEIDATAICSPDKKNKILETDNDVLMTPGPSKDFISVKDETVEIKLENRFLSLRS
SVNYKYGYEDIITGTFDEKLDECLARGININIKNEVNNDLSFAMIEEYNDMLSKDGYKLH
MKFRDKLPTYQKYEELLNMINNNQVLVISGETGCGKSTQVPQIILDDAIINKRGANVKIL
VTQPRRIAASSLAMRVAEERNEKLGNSVGYAVRLEKVDPRPLGSIMFCTTGILLTELEVN
QSLSNYSHIILDEVHERDTHIDLSMCMLKKVLNKRKDLKLILMSATINAEHLTSYFGDCQ
RIHIEGIAYPVQDVYLEEILKMTGYKLPPAENKRADKRKTWQNHTKKAKAMAASEMEKDI
QYKAEIGPWLETVKGKIGWDVCTTLLDARIEDINIDLIVEVLKLISSKEPGAVLVFLPGI
GDITKLMSVMEQSCEFPKSKFDVYPLHSRLPSLEQHKIFQRPPTGIRKIIIATNIAETSI
TIDDIVYVIDCGKIKYSGLSIADNISTLKTEWISQANLRQRRGRAGRCQPGVCYHLVTSF
RAGKLEPSLKPEMQRSDLLEPVLAIKRLRLGKAADALKDMAAPPAEETIKAAVKHLQQCG
ALNESEILTPLGWHLARLPVHPAAGKLLLLGALFGCLDRAASVAAVWGFKDPFQLVIGKE
KQMDLAKKELALGEPSDHVAISEAIIQWEQCPRQHRNNFAYKNFLSMNTLKLLSEMKHQL
ADNLRQMGFLNTGNIKSAWENRNANNLSLFKAIVAAALYPNIGSVRWTNLHNRNPRKTPR
IKVWTPEDGSIALHPSSVMANKHNGGLNAQPMCASPGANWLVYWLKRRSTDLFLFDVTLV
YTLPLLFFGELHVSPAAEDPDDCIISIEKISVCCKKETTQLLFEMRSLLDHVLADKIMAS
SEHSVKNNAFEEQVLNAVIKLITAEDEGAEYLNSDDDNSESDHSEYETSRRWYR
NT seq
3405 nt
NT seq
+upstream
nt +downstream
nt
atgcataaaaaacatttaattttccacggaattataaatattttttttaaaatgcctcgg
agatataattcttttgataggtttgataggccacgaccaccgaaatcgggtctaagaggc
aaagaaattggaatgtattataaagctttaagtattgaaaaaggaaagaaaaataagaaa
aacaatgtgatacgcttcaaaattccaccaagcattgtctcatcactgtatagtaattta
gcatcaatagaaaagcttgctaaaggactgaacatttgcataaaaccaatagaaaaattg
actattgcagaaacaccaaaaggcttaaaacctgaactgtcattacatgaagcgatgtac
atgaacacgagtacagctgaaaacaaaaacagtgtgcaggcaagtgataatgaaaatcta
tttgaagcaaaaacaccactaactgattttaaaaagctagaagatatttcaatgatatct
gaagatgctgaattacgttcaccaagcgatgttgacaacaaatcaaatggtatacctgtt
tttggaagtatccaaaaagaaatagatgctactgcaatatgttcaccagataaaaaaaac
aaaattttggaaactgataatgatgttttaatgaccccagggccatctaaggattttatt
tcagtaaaggatgaaactgtggaaatcaaattagagaaccgttttttatcacttagaagt
tcagttaactataaatatggctacgaagatatcataactgggacgtttgatgaaaaatta
gatgaatgcttggcaagaggaatcaacattaatattaagaatgaagtaaataatgatctc
agttttgcaatgatagaagaatacaatgatatgttgagcaaagatggttataaattgcac
atgaaatttcgtgacaagctacctacataccaaaaatatgaagagctcttaaacatgatc
aacaataatcaagttttggtcataagtggagaaacaggatgtggcaaatcgacacaggta
cctcaaataattcttgatgatgccattattaacaaaagaggtgcaaatgtgaagattcta
gtaactcaacccaggagaatcgcagcttcatcattagctatgagagtggctgaagagaga
aatgagaaactagggaatagtgtgggatatgctgttagattggagaaggttgatccaagg
cctctaggaagcattatgttttgtaccacaggtatactactgactgaacttgaagttaat
caaagtttgtctaactatagccatattatcctcgatgaagtgcatgaaagggacacacat
atcgacttgtctatgtgtatgctaaaaaaggtactgaataagcgaaaagacttgaaacta
atacttatgagtgccacaataaatgctgaacatctcacttcctactttggtgactgtcaa
agaatccacattgaaggtatagcatatcctgtccaagatgtttatttagaagagatattg
aaaatgactggatataagttgccacccgctgaaaacaaaagagctgataagagaaagact
tggcaaaatcacacgaaaaaggctaaagctatggcagcctctgaaatggaaaaagacata
caatataaagcagaaattggaccatggctagaaaccgtaaaaggcaaaatcggttgggat
gtatgtactacattactagatgcaaggatcgaagatattaatattgatttaattgtagaa
gttcttaaattaattagcagtaaagaacccggcgccgtcctggtgtttctacccggaatc
ggtgatataaccaagctcatgtccgtgatggagcagagttgtgaatttccgaaatcgaaa
ttcgacgtatatcctctacattcgcgactaccttctttggaacaacacaagattttccaa
agaccaccgaccggtatccgaaaaatcataatagctacgaatatcgcggaaacatcaatt
acaatcgatgatattgtatacgtaatcgattgcggtaagattaaatacagcggactaagc
attgcggacaacatatcgacattgaaaactgagtggatatctcaggccaatttgcgacaa
agacgaggccgcgccgggcgatgccaacccggcgtctgttatcacttagttacatcgttc
cgagctgggaaactcgaaccgagcctaaagcctgagatgcagaggagtgacctactcgag
cccgtgcttgccataaaacggcttcgactcggaaaagctgctgatgctttaaaggatatg
gcggctccaccggcagaagaaactattaaagctgccgttaaacatttacaacaatgtgga
gccctcaatgaatcagaaatcttaacacctcttggttggcatttggcacgactaccagtt
caccctgcggctggtaaattattgctgttgggagcgctgttcggttgtttggaccgagcc
gccagcgttgccgccgtttggggcttcaaagacccttttcagttagttattggaaaagaa
aaacaaatggacctagcaaaaaaggaattagccctaggtgagccaagtgaccacgttgcg
atatccgaggcaattatacaatgggaacaatgccccaggcaacatcgtaataatttcgca
tacaaaaacttcctttccatgaatactctgaaattactctctgaaatgaagcatcagctg
gccgacaatttgaggcagatgggctttttgaatactggcaacatcaaatcggcttgggaa
aatagaaatgctaataatctaagcctttttaaagctatagtcgctgcagcgctatacccc
aatattggttctgtgaggtggacgaatcttcataaccgaaatccacgtaagactccccgc
atcaaggtttggactccggaagacggctcgatcgcgctgcaccccagcagcgtcatggcg
aacaaacacaacggcggcctcaacgctcagccgatgtgtgcgagcccgggcgctaactgg
ctggtgtactggttgaagcggcgctcgaccgatttgttcttgtttgacgtcactctggtc
tatactctgcctctgttgtttttcggtgaacttcacgtgtctccagcagctgaagaccca
gatgactgtatcatatcgatagaaaagatatctgtttgttgcaagaaggaaactacacaa
ttgctgtttgaaatgcggtcgttattagaccacgttttagccgacaagatcatggcgtct
tccgaacactccgtaaaaaataatgcctttgaagaacaggttctgaatgcagtgataaag
cttattacagcagaggacgagggcgctgaatatttgaacagcgacgacgacaattccgaa
tctgatcattcagaatacgaaacgagcaggaggtggtaccgttaa
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