Bombyx mori (domestic silkworm): 101736177
Help
Entry
101736177 CDS
T02817
Name
(RefSeq) U4/U6 small nuclear ribonucleoprotein Prp4 isoform X1
KO
K12662
U4/U6 small nuclear ribonucleoprotein PRP4
Organism
bmor
Bombyx mori (domestic silkworm)
Pathway
bmor03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
bmor00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
101736177
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
bmor03041
]
101736177
Spliceosome [BR:
bmor03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
101736177
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_Prp19
WD40
WD40_CDC20-Fz
Beta-prop_EML_2
WD40_WDHD1_1st
EIF3I
WDR55
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
PRP4
WD40_MABP1-WDR62_2nd
Beta-prop_WDR75_1st
Beta-prop_EIPR1
Beta-prop_WDR90_POC16_2nd
Beta-prop_RIG_2nd
Beta-prop_TEP1_C
WD40_MABP1-WDR62_1st
ANAPC4_WD40
Beta-prop_DCAF4
Beta-prop_EML
WDR90_beta-prop_4th
NBCH_WD40
Beta-prop_SCAP
Beta-prop_Nup120_160
Motif
Other DBs
NCBI-GeneID:
101736177
NCBI-ProteinID:
XP_004925115
UniProt:
A0A8R1WIP2
LinkDB
All DBs
Position
24:complement(18532480..18546634)
Genome browser
AA seq
532 aa
AA seq
DB search
MSDDEDIAYLKKQKQVHYGSLEEQEKARLAALAAAAKEGAEDPGGKELGDIQISNEYMEL
EEEISRDKKALLEEFERRRKARQLNVSTDDDEVRRSLRQLGEPVCLFGEGPAERRVRLRD
LLSYLGEDAINKKLEEEEARLERDRGREGTWYHEGPPTLRQARIWIARYSLPNAKKRLNK
AREELKLAGSVRAAAKQESQRKASAFSIYCSQIGDTRPLSFCRFSQDSKMLITSSWSGLV
KVWSVPDCAPLQVLKGHTCNVSSATFHPKAELPSHFRQKVNVTNGDAMEADGSDDDKSAV
CTMASCAYDGTVHLWNFASESPMASLPGHSPHRVSRAEFHPSGRFLATTVFDHSWRLWDL
ETATEVLHQEGHAKPVYSIAFQCDGSLAVTGGMDAFGRVWDLRTGRCVMFLEGHLGPVLG
TDWSPAGHCLATAAGDHQTKIWDLRRRSCLYTVPAHAHLVSDVRYQRSHGHFLLTASYDR
SAKLWSNPAWHPLRTLSGHDNKVMSADISGDSKHVATCSYDRTFKLWAPELI
NT seq
1599 nt
NT seq
+upstream
nt +downstream
nt
atgtctgatgacgaagatatcgcgtatctaaagaaacagaagcaggtacattatgggtcg
ctggaagaacaggaaaaggcgagactagcagccttagctgcagccgccaaagagggagca
gaggaccccggcggcaaagaactaggagacatacaaatatctaacgagtatatggagtta
gaagaagaaatatccagagataagaaggcactacttgaagagtttgagaggagacgcaaa
gcaaggcaactgaatgtgtccactgatgatgatgaggtaaggagaagcttacggcagttg
ggtgagcctgtatgcctgttcggagagggaccggccgagaggagagtcagattaagggat
ctgttaagctatctcggcgaagatgctatcaataagaagctagaagaggaagaagcacgc
ctggaaagagacagaggtagagaaggtacctggtaccacgaaggtcccccgaccttgagg
caagcgaggatttggatagccaggtactccctgcctaacgccaaaaaaaggctaaacaaa
gcccgcgaggaactcaagttggctggcagtgtgcgcgccgccgctaagcaggagtcgcaa
cggaaggcgtctgcctttagcatttactgcagccagatcggggacacgaggccgctgagc
ttctgcaggttcagccaggacagcaagatgctgatcacttcgagctggtcagggctggtt
aaggtctggtcggtgccggactgcgcccccctgcaggtgctcaagggccacacttgcaac
gtgagcagcgcgaccttccacccgaaggcggaactgccctcgcatttccggcaaaaggtg
aacgtaactaatggggacgcgatggaggcggacggctcggacgacgacaagtctgccgtt
tgcacgatggcttcgtgcgcgtacgacggtaccgtccacctgtggaactttgcgagcgaa
tcccccatggcgtcgttgccgggacacagtccgcaccgcgtgtcccgggcagagttccac
ccctcggggcggttcctcgcgacgacggtcttcgatcactcctggaggctgtgggacttg
gagacagcgaccgaagtattgcaccaggagggtcacgctaagccggtctatagtatagct
ttccagtgcgacgggtccctggccgtcaccggcggcatggacgctttcggtcgagtgtgg
gacctccgcacgggtcgctgcgtgatgttcctggagggtcacctgggtcccgtgctgggg
acggactggtccccggctggacactgcctcgccaccgccgccggagaccaccagaccaag
atctgggacctccggaggcgctcgtgtctctacacggtcccggctcacgcgcatctggtc
agcgacgtccgataccaacgaagccacgggcacttcctactaacggcttcgtacgaccgg
agcgcgaagctgtggtccaacccggcctggcacccactgcggaccctcagcggacacgac
aacaaggtgatgagcgcggacatatctggggacagcaaacacgtggccacgtgctcctac
gaccggaccttcaagttgtgggctccggagttgatataa
DBGET
integrated database retrieval system
