Bombyx mori (domestic silkworm): 101736673
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Entry
101736673 CDS
T02817
Name
(RefSeq) collagen alpha-1(I) chain
KO
K19721
collagen type V/XI/XXIV/XXVII, alpha
Organism
bmor
Bombyx mori (domestic silkworm)
Pathway
bmor04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
bmor00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
101736673
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
bmor00536
]
101736673
Glycosaminoglycan binding proteins [BR:
bmor00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
101736673
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
COLFI
Laminin_G_3
Laminin_G_2
Laminin_G_1
Motif
Other DBs
NCBI-GeneID:
101736673
NCBI-ProteinID:
XP_004928770
UniProt:
A0A8R2AJ12
LinkDB
All DBs
Position
15
Genome browser
AA seq
1777 aa
AA seq
DB search
MAPQTSAQFLFILFCVLSGGSGDDVVDGVAFFDLLSEVRRGDLPEGFTRTEGRCQSYSTP
KSEYTAFSLNENASLHHLTAGMFYNTFPEDFSILAVLRMPNGTEQNPVFVMYSDAGDEQL
QLVVGEMVELYYEDTRGDPQDHELLTYRANIAEGRWHRLALSLKGDSATLIVDCDYIETM
PLNRKTGSTFNLAGAIVVGVQYTPDQYYEGDIEMLQFADKPDIAYEMCTVVAPDCRGLGY
FAGGIFNSELEPRYRPLHYNEITTQTDFNVETTEQPRTFENVDTERFIDRNQTNNPWEVA
SRELTTIRPNWHITESYNPITGQFVRSTDADENSIFGRFTDGEFTPALSLDADSSPTTPE
TVEITPSLDTSHITPGTGEETEVTLVTTDSPYTPITTTEDTNWLTHPPDEAENNSSNYDS
SETYYDYGSSGSYNGPRGYAGPPGPQGPRGPKGEPGKPGVEGQQGFQGPPGHVFVVPIQQ
SGSDKGPDVQSEALRQMLTQHMAAMRGVEGPMGLTGPPGPEGGIGPEGPKGEQGEQGEPG
PPGPRGSQGPPGRQGRRGHAGRDGERGTTGPFGQKGEPGYPGSSGMPGDKGERGISGLQG
EPGAPGQDGPPGDDGPPGPQGLSGELGPRGFVGPRGFPGLIGYPGIPGNEGLQGSKGATG
QPGPSGPQGQPGISGPPGAPGAQGPTGIPGLQGPQGKSGISGQPGPEGVPGTPGNPGQQG
SPGEVGPQGPQGMLGFPGTRGIKGDEGPRGLPGDKGDKGIRGIEGEKGDMGPKGERGLSG
EVGTPGIEGPEGQKGVEGPRGETGPIGPSGEKGATGPLGPQGYPGTQGEKGDKGASGRRG
RRGNKGNTGAIGNPGDRGEMGPRGYRGPRGRRGSDGAPGAKGDTGQPGPPGQIGERGPQG
VEGVRGFPGAIGPPGADGKAGLPGPTGERGPTGEPGAQGLIGPVGIMGPQGPNGDPGPPG
PTGSSGIPGTPGEAGSPGEAGKEGPPGPSGPEGKQGPVGPSGPQGPQGDPGLPGTPGNAG
SKGDLGPPGPPGIRGDKGEPGEPGHEGNAGPQGREGPRGFTGPGGQKGEIGEQGPIGPIG
RDGLTGPRGLPGVPGPVGPPGEDGDKGEAGPPGEKGFKGATGESGPQGAPGIQGLRGEVG
PVGLPGEKGPPGDIGLPGSPGIDGTRGPPGPIGPTGLQGIKGQQGPKGDAGDIGPVGATG
QPGATGPPGRRGAKGIAGEPGPRGPEGQQGELGSPGPTGQPGPSGPEGKQGPTGPVGPKG
DDGSVGLQGEPGPKGLPGPEGPKGDNGPAGLPGERGEPGPSGIKGEPGTEGPEGSTGPPG
PPGPVGPTGKPGESGMPGSPGSEGPAGLQGSPGLAGEKGDVGAKGAQGEPGPNGPPGPPG
PEGQRGIRGSPGPNGEVGAPGVMGPSGPSGKAGPPGAPGIRGEKGDRGPKGHIGNTGPMG
LKGDQGEVGKTGAPGPMGPSGPKGDNGPIGPPGQKGDTGPIGLTGPEGPLGPKGQTGPEG
RPGLPGPPGAPGPPGPPAPAPQIPQQLLSSYRRKRSIDSISSSIETGTEDSFDDEEDINW
VKEIMSGIIVARSTLETVKNPRGTRTNPALSCKDLKTSFPNITDGDYWIDARGGSGSGRP
IKAYCKGYSTCLYPDVKEQSVYNNDANTHKFSQMKNGFRISYDAEGSGAIQLRFLRLLSK
GARQNFSYVCVNTEIQQRSDIPMDLVRASNIKLYGFNSAEFREPQIVKDECKDGSGEIVL
EIKTSRTERLPITDFQPLSFNEAKHQFGFKVGPICFT
NT seq
5334 nt
NT seq
+upstream
nt +downstream
nt
atggctccacagacaagcgctcagtttctattcatattgttttgcgtgcttagtggagga
agcggggacgatgtagtcgatggagtagcgttctttgacctactgtcggaggtgcgccgc
ggtgatctacccgaaggattcacaagaactgaaggacgatgccaatcttactcgacgccc
aaatctgaatacaccgccttcagtctaaacgaaaatgcgtccttacatcatctcaccgcg
gggatgttttacaacacgttccctgaggacttttccattttggccgtacttagaatgcca
aacggcacagaacagaaccccgtattcgtgatgtactcggatgctggtgacgaacaactg
caactggtagttggagagatggtcgagttatattacgaagatacaaggggtgaccctcaa
gatcatgagctcctaacttatcgcgctaatattgctgaaggaagatggcatcgtctagca
ctcagcctaaaaggcgattctgccactcttatcgtggattgcgattacatagaaacaatg
cctctaaatcgaaaaactgggagcacgttcaacttagccggtgctatcgttgtgggagtc
cagtataccccagatcaatattacgagggggatatagaaatgctacagttcgctgacaaa
cctgatattgcctacgaaatgtgcacagtagttgcaccagactgcagaggcctcggctac
tttgcaggaggaatttttaattctgaactagaaccccgatatcgacctcttcattacaac
gaaataactactcaaacagactttaatgttgaaactacagagcagccgaggacatttgag
aatgtcgatacagaaagattcattgataggaatcaaactaataatccatgggaagtcgct
agcagagaattaacaacgatcagaccaaactggcacatcacagagtcatacaatccgatt
acgggacaattcgtacgttctacagatgcagatgaaaacagcatatttggaagatttacg
gatggcgaatttacacctgctctctcattagacgctgatagctctccgaccactcctgaa
actgttgaaataacgcctagtcttgatacctcacacattacgccagggaccggtgaagag
acggaagtaactttagtaacaacagactcgccctacacccctattacgaccacagaagac
acaaattggctcacacacccgccggatgaagccgaaaataactcatcaaattatgattca
tcagaaacatattatgattatggtagctctggctcgtataatggtccaagaggatatgcc
ggaccgcctggaccccagggaccaagaggaccgaaaggtgaaccaggcaaaccaggagta
gaaggacaacaagggtttcaaggtccgcctggacatgtttttgtcgtacctatacaacaa
tcaggcagtgataaaggccccgatgttcagtctgaagccttgcgacaaatgttaacgcaa
cacatggctgcaatgcgaggtgttgagggcccgatgggtctaaccggacctccgggacct
gaaggtggaattggtcctgaaggaccgaagggtgaacagggcgaacaaggagagccaggc
ccaccaggtccaagaggttctcaagggccgccaggcagacaaggacgccggggtcatgcc
ggcagggatggcgaaagaggtacaacaggacctttcggtcaaaagggtgaaccaggatac
ccgggatcttcaggcatgccaggagacaaaggagagcggggcatctcaggattacagggt
gaaccaggagctccaggacaagacggtccccctggagacgacggtcctccggggccacaa
gggctttctggcgaactggggccaagaggttttgtgggacctagaggttttccaggctta
ataggatatcctggcatacctgggaacgagggtctccaaggatcgaaaggagcaacagga
caaccagggccatccgggccgcaaggacaaccaggtataagtgggcctccaggagcacca
ggtgcacaaggaccaaccggaataccgggcttgcaggggcctcaaggaaaatctggaata
tccggacaaccaggaccggaaggagtacccggtacccctggtaatccaggacaacaagga
tctccaggagaagttgggccacaaggaccacagggaatgttaggtttccctggaactcgt
ggaataaaaggagatgaaggaccacggggcttaccaggagacaaaggagataaaggcata
aggggcattgaaggcgagaaaggagacatgggtcctaaaggagaacgaggactatctggc
gaagttgggactcctggtatagaagggcctgaaggtcagaagggcgttgaaggtccaaga
ggagagacaggaccaattggaccttcaggtgagaagggagctactggtcctctcggtcct
caaggatatccgggcacccaaggtgaaaaaggagataaaggagcttcaggacgaagaggt
cgaagaggaaacaaaggaaatacgggtgctattggaaatccaggcgaccgtggtgaaatg
ggaccaaggggttataggggtcctagaggacgccgtggttcagatggggcccccggtgct
aaaggtgatactggccaacctggaccaccaggacagataggagaaaggggacctcaagga
gttgaaggagtgagaggcttcccgggagctataggccctccgggagctgatggcaaagct
ggattgcctggaccaactggagaacggggccctacaggtgaacctggtgcccaaggatta
ataggacccgtaggaataatgggcccacaaggacctaatggtgacccgggtcctccagga
ccaactggatcttccggaatacctggtactccaggtgaggctggttctccgggcgaagct
ggtaaagaaggtccgcctggaccttcaggccctgaaggaaaacaaggacccgtgggcccg
tctggacctcaaggaccccaaggagatcctggtttaccaggaacaccgggaaatgccgga
agcaaaggagatttaggtccacctggaccccctggaataagaggtgataaaggagagccc
ggcgaacccggtcatgaaggtaatgcaggacctcaaggacgtgaaggaccgcgaggattt
acaggcccaggtggtcaaaaaggcgaaattggtgaacagggaccaatagggccaatcggg
cgtgatggcttaactggcccacgaggcttaccaggagttccaggccctgtaggtcctcct
ggagaagatggtgacaaaggagaagcagggccacccggagaaaaaggttttaaaggtgcc
acgggcgaatcgggtcctcaaggggcacctggcattcaaggtcttcgtggagaagttggt
ccagttggtcttccaggagaaaagggacctccgggtgatattggacttcctggttctcct
ggtatcgacggaacacgtggacctccgggaccaattggtcctacaggacttcaaggaatc
aaaggacaacagggtccaaaaggagacgctggtgacataggtccagttggcgccaccggc
cagccgggtgcaacagggccgccgggccgacgtggcgctaaaggtatagcaggtgagcct
ggtccacgtgggccagaaggacaacaaggagaattgggcagtccaggaccaacgggccaa
ccagggccatcgggccctgaaggaaaacaagggccaactggaccagtaggacctaagggt
gatgacgggtcagtgggcttgcaaggagaaccaggacctaaaggtttacctggcccggaa
ggccccaaaggcgacaacggacctgccggcttaccaggtgaacgaggtgaacctggacct
tcaggtatcaagggtgaacccggaactgaaggtcccgagggtagtactggtccaccaggg
ccacccggacctgtgggaccaacaggaaaacctggcgaaagtgggatgcccggtagtcct
ggctccgagggtcctgcaggtctacagggtagtcctggattagccggggaaaaaggcgat
gttggagctaaaggagctcaaggtgaacctggtccgaatggtccaccaggacctcccggt
ccagaaggacaacgaggtattagaggatcaccaggacctaatggcgaagttggagcacca
ggagtaatgggtccatcgggaccttctggaaaggctgggccacctggagctccgggtatc
agaggtgaaaagggagacagaggacctaaagggcatatcggaaatactgggcctatgggc
ctgaaaggagatcaaggcgaagtcggaaaaacaggagcacccggcccaatgggtccatca
ggcccaaagggcgataatggacccatagggccaccagggcaaaaaggcgatacgggcccg
attggtcttacaggacctgagggtcctctaggaccgaaaggccagacaggaccggagggc
cgtcctggattaccaggaccaccaggtgcaccaggtccacccggaccccccgcaccagcc
ccacaaattcctcaacaacttttatcatcttatagaagaaaacgcagtattgactccatt
tcctcctctattgaaaccggcactgaagacagttttgatgacgaggaagacatcaactgg
gtgaaagaaataatgtcaggaataattgttgctcgcagcactctggaaaccgttaaaaat
ccaagaggaactagaaccaatccagcactgtcgtgcaaagacttaaagacgtcatttcct
aatattactgacggcgattattggattgatgctagaggtggaagcgggagcggacgtcca
atcaaagcctactgcaaaggatatagtacttgtttatatccggatgttaaagaacaaagc
gtttacaacaatgacgccaatacccataagttttcacagatgaaaaacggtttccggata
tcttatgacgcagaaggatctggagccatacaattgcgtttcctgaggctactttcaaaa
ggagcccgtcaaaacttctcgtatgtttgcgtaaataccgaaatacaacaaagatctgat
atcccgatggatttggtaagagctagcaatatcaaactgtacggtttcaactctgctgaa
tttagggaaccccaaattgtcaaagacgaatgtaaggatggatcaggcgagatcgtattg
gagattaaaacgtcaaggacggaaagacttccgataacagacttccaaccgctaagcttt
aatgaagcaaaacatcaatttggcttcaaagttggacctatttgtttcacgtaa
DBGET
integrated database retrieval system