Bombyx mori (domestic silkworm): 101736904
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Entry
101736904 CDS
T02817
Name
(RefSeq) general transcription and DNA repair factor IIH helicase subunit XPB
KO
K10843
DNA excision repair protein ERCC-3 [EC:
5.6.2.4
]
Organism
bmor
Bombyx mori (domestic silkworm)
Pathway
bmor03022
Basal transcription factors
bmor03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
bmor00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
101736904
09124 Replication and repair
03420 Nucleotide excision repair
101736904
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bmor03021
]
101736904
03400 DNA repair and recombination proteins [BR:
bmor03400
]
101736904
Enzymes [BR:
bmor01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
101736904
Transcription machinery [BR:
bmor03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
101736904
DNA repair and recombination proteins [BR:
bmor03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
101736904
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ERCC3_RAD25_C
Helicase_C_3
ResIII
Helicase_C
DEAD
SNF2-rel_dom
AAA_34
Motif
Other DBs
NCBI-GeneID:
101736904
NCBI-ProteinID:
XP_062527133
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Position
11:complement(11790613..11804679)
Genome browser
AA seq
776 aa
AA seq
DB search
MGPPKKFKRYDSKGGSDRSSKKKKVDEDITIDLVDDDNAENDGVPVAAMQDAEKNDQVPE
DEFGAKDYRSQMPLKPDNASRPLWVAPNGHIFLEAFSPVYKHAHDFLIAIAEPVCRPQHI
HEYKLTAYSLYAAVSVGLQTNDIIEYLQRLSKCAVPAGIVEFIKLCTLSYGKVKLVLKHN
RYLVESKHVEVLQKLLKDPVIQQCRLRRDGDEDLLSNDLPAKPATSLAKPGEEKPPAANG
AVPDDISQFYQQLDKDDDEEETSGVTANAAVAFEVDPDKIEVIQKRCIELEHPLLAEYDF
RNDSINPDINIDLKPTAVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTAVCTV
RKRALVLCNSGVSVEQWKQQFKCWSTADDSMICRFTSEAKDKPMGAGILVTTYSMITHGQ
RRSWEAEQTMKWLQAQEWGLVVLDEVHTIPAKMFRRVLTIVHSHAKLGLTATLLREDDKI
ADLNFLIGPKLYEANWLELQAAGYIARVQCAEVWCPMTPEFYREYLVQKINKKMLLYVMN
PSKFRACQYLVRYHERRGDKTIVFSDNVFALRHYAVKMNKPYIYGPTSQSERIQILQNFK
FNPKVNTIFVSKVADTSFDLPEANVLIQISSHGGSRRQEAQRLGRILRAKKGALAEEYNA
FFYTLVSQDTLEMAYSRKRQRFLVNQGYSYKVITELKGMDQEPDMLYGTREEQGTLLSQV
LAASETECEEEREGAVGGVSRRGGALSSLAGADDALYVERRGNQHNKHPLFKKFRY
NT seq
2331 nt
NT seq
+upstream
nt +downstream
nt
atggggcccccgaagaaattcaagagatatgactcaaaaggaggaagtgatagatcaagt
aaaaagaaaaaagtagatgaggatataacaatagatcttgtagatgatgataatgcagaa
aacgatggggtccctgttgctgccatgcaagatgctgagaagaatgatcaagtacctgaa
gacgaatttggtgctaaagattatagaagtcaaatgccgcttaaaccagacaacgccagt
cgtcctttatgggtggcacccaatggacatattttcttggaagcattttctccagtttac
aaacatgctcatgattttttgattgctatagctgaaccagtttgcagaccccaacacata
catgaatacaaattgacagcgtacagtttgtacgcggcagtttcggtgggcctacagacc
aatgacattattgagtacctgcagagactgagcaagtgtgctgtaccggccggcatcgta
gagttcattaaactatgtaccctctcttatggtaaagtgaagctggtgttaaaacataac
aggtatctagtcgagagtaagcacgtggaggtactgcagaagctattgaaagatccagtg
attcaacagtgcaggctgcgacgcgacggcgacgaggatctgctgtccaacgacctgccc
gccaagccagccacgtccctcgccaaaccaggtgaagaaaaaccaccggcggcgaacggc
gctgtgcccgacgacatcagtcagttctatcagcaactagataaggatgacgacgaggag
gagacctctggtgttactgccaacgcagctgttgcctttgaagtggatcctgacaaaatc
gaagtaatacaaaaacgttgtatcgagttggagcatccattgctggctgagtacgacttc
cggaacgactccatcaatccggacatcaacattgatcttaaaccaactgccgttttgcga
ccttatcaagagaagagcttgaggaaaatgttcggcaacggcagggcgaggtcaggcgtg
atagtgttgccgtgcggcgccggcaagtcgctggtgggcgtgacggcggtgtgcacggtg
cgcaagcgcgccctcgtgctctgcaactccggcgtctccgtggaacagtggaagcaacag
ttcaagtgctggtccacggcggacgacagcatgatctgcaggttcacatcagaagccaag
gacaagccgatgggagcgggtatcctcgtaacgacgtattccatgataactcacggacag
agacgctcgtgggaggccgaacagacgatgaagtggctccaggcccaggagtggggcctg
gtcgtgctcgacgaagtgcacacgatacctgccaaaatgttccgcagggtgctcaccatc
gtgcactcgcacgccaaactgggtttgacggcgaccctgctgcgagaggacgacaagatc
gcggacctgaacttcctgataggcccgaagctgtacgaggcgaactggctcgagctgcag
gcggccggctacatcgcgcgcgtgcagtgcgccgaggtgtggtgccccatgacgccagag
ttctacagggaatacctagtgcagaaaataaacaagaaaatgttgttgtacgtaatgaac
ccgtcgaagttccgcgcgtgccagtacctggtgcgctaccacgagcggcgcggcgacaag
accatcgtgttctccgacaacgtgttcgcgctcaggcactacgccgtcaagatgaacaag
ccatacatctacgggccgacgtcccagagcgagcgaatacagatcctccagaatttcaag
ttcaaccctaaagtgaatacgatattcgtgagtaaagtcgccgacaccagcttcgatctg
cccgaagcgaacgtgcttatacagatctcttcgcacggaggctccaggcgacaagaggca
cagagattaggtcgtattttaagagcaaagaaaggcgctttggccgaagaatataatgcc
tttttctacactctagtatcacaagacaccttggagatggcttacagtagaaaaagacaa
agatttcttgttaatcagggttacagttataaggttataacagaactaaaaggtatggat
caagagcccgatatgctgtatggcacccgcgaggaacaaggcactttactctcacaggtg
ctggcggcctctgagacagagtgcgaggaggagcgggagggcgcggtggggggcgtgtcg
cggcgggggggcgcgctgtcgtcgctggcgggcgcggacgacgcgctctacgtggagcgc
cgcggcaaccaacacaacaaacatcctctcttcaagaagttccgatattag
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