Bombyx mori (domestic silkworm): 101736989
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Entry
101736989 CDS
T02817
Name
(RefSeq) THO complex subunit 6
KO
K13175
THO complex subunit 6
Organism
bmor
Bombyx mori (domestic silkworm)
Pathway
bmor03013
Nucleocytoplasmic transport
bmor03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
bmor00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
101736989
09122 Translation
03013 Nucleocytoplasmic transport
101736989
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bmor03019
]
101736989
03041 Spliceosome [BR:
bmor03041
]
101736989
Messenger RNA biogenesis [BR:
bmor03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
101736989
Spliceosome [BR:
bmor03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
101736989
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40_WDHD1_1st
Beta-prop_IFT122_1st
Beta-prop_WDR3_1st
Beta-prop_WDR5
Beta-prop_THOC3
WD40_Prp19
WD40
WD40_CDC20-Fz
Beta-prop_EML_2
WDR55
DSE1_N
Beta-prop_ACSF4
Beta-prop_TEP1_2nd
Beta-prop_WDR41
Beta-prop_WDR3_2nd
Beta-prop_WDR36-Utp21_1st
Beta-prop_NOL10_N
EIF3I
NBCH_WD40
WD40_MABP1-WDR62_2nd
Beta-prop_SCAP
WD40_RFWD3
Beta-prop_WDR36-Utp21_2nd
Beta-prop_SPT8
Beta-prop_CAF1B_HIR1
Beta-prop_VPS8
TRM82_WD
ANAPC4_WD40
CFAP251_N
Beta-prop_RIG_2nd
Beta-prop_TEP1_C
WD40_Gbeta
Beta-prop_DCAF4
Beta-prop_EIPR1
Beta-prop_WDR75_1st
Beta-prop_IFT140_1st
Beta-prop_NWD2_C
WDR90_beta-prop_4th
Motif
Other DBs
NCBI-GeneID:
101736989
NCBI-ProteinID:
XP_037869446
UniProt:
A0A8R2LY99
LinkDB
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Position
10
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AA seq
325 aa
AA seq
DB search
MLNKMLYNTVLSQTLSPCGKYLVAGNIYGDLAVFDLDRILNPVLELLSVEYNKPKHIHSI
DSKKQICSLVSTEKFLIIGTVNEICGWDWKAVVSVKLSKPVWSIKIPSQTFLDYNDVNCM
WLSQDSEKLYAGCGDNNVYVFNLEDGSLISTYKGHNNFIHSIHGKNQQIISAGEDGLVML
WDTRSGKSHNKLEPHTNNKVSRPDIGKWIGSAALGDDWIVCGGGPRLSLWHLRSLDAVTV
FDIPDNGIHVSFFHDDCVFAGGTSKHFYQMSYSGEVRVELPVSATTIYSAVLRTKYSTLL
SLAGSSPEIDLCTSLNYKDQVLHFR
NT seq
978 nt
NT seq
+upstream
nt +downstream
nt
atgttgaataaaatgttgtataacactgttttatctcagactttatcgccgtgtggtaaa
tatttagtggccggcaatatttatggagatcttgctgtatttgacctagatcgtatttta
aatccagtactagaattattatctgttgaatacaacaaaccaaaacatatacattctata
gattcaaaaaaacagatttgtagtctagtttcaacggaaaaattccttataattggtacc
gttaatgaaatatgcggatgggactggaaggctgttgtttctgttaaattatcaaaacct
gtatggagcataaagattccttcccaaacttttttggactacaacgatgtgaactgcatg
tggctatctcaagacagtgagaagctgtatgctggttgtggagacaataatgtgtatgtg
tttaatttggaagatgggagccttatttcaacttataagggacataataattttattcat
tctattcatggaaaaaaccaacagattatttcagcaggcgaagatggtttggttatgctt
tgggatactagaagtggaaaatcacacaataaattggaaccgcacactaataataaggtc
agcagacctgatattggcaagtggattggctcagcagctcttggagatgactggattgta
tgcggtggtggacctcgattgtctctgtggcaccttcgttcattagatgcagtgacagtc
tttgacattccagacaatgggattcatgtgtcattctttcatgatgactgtgtgtttgcc
ggtggtacttctaaacatttttaccaaatgagctactcgggtgaggtgagagtagaacta
ccagtgtctgccacgaccatatacagtgcggtgctaagaactaaatacagcaccctgtta
agtttagccggttccagtccagaaatagatttgtgcacgtctcttaattacaaagatcaa
gttttacattttcgatag
DBGET
integrated database retrieval system