Bombyx mori (domestic silkworm): 101737123
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Entry
101737123 CDS
T02817
Name
(RefSeq) pre-mRNA 3' end processing protein WDR33 isoform X1
KO
K15542
polyadenylation factor subunit 2
Organism
bmor
Bombyx mori (domestic silkworm)
Pathway
bmor03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
bmor00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
101737123
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bmor03019
]
101737123
Messenger RNA biogenesis [BR:
bmor03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
101737123
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_THOC3
WD40
Beta-prop_WDR5
Beta-prop_WDR3_1st
Beta-prop_IFT122_1st
WD40_CDC20-Fz
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_WDR3_2nd
Beta-prop_EML_2
WDR55
Beta-prop_CAF1B_HIR1
Beta-prop_EML
WD40_Gbeta
Beta-prop_WDR36-Utp21_2nd
EIF3I
Beta-prop_IFT140_1st
ASA1
Beta-prop_WDR36-Utp21_1st
Beta-prop_Aladin
ANAPC4_WD40
Beta-prop_TEP1_2nd
Beta-prop_WDR19_1st
WD40_MABP1-WDR62_2nd
DSE1_N
Beta-prop_RIG_2nd
Beta-prop_WDR90_POC16_2nd
CFAP251_N
Beta-prop_EIPR1
Beta-prop_WDR35_TULP_N
eIF2A
Beta-prop_WDR75_1st
WD40_RFWD3
Beta-prop_Vps41
WDR90_beta-prop_4th
WD40_MABP1-WDR62_1st
Beta-prop_SCAP
Beta-prop_NOL10_N
Beta-prop_DCAF4
Beta-prop_HPS5
PEP5_VPS11_N
Tricorn_2nd
Beta-prop_WDR11_2nd
Beta-prop_WDR41
Beta-prop_ACSF4
WD_LRWD1
Motif
Other DBs
NCBI-GeneID:
101737123
NCBI-ProteinID:
XP_004931774
UniProt:
A0A8R2AWS6
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All DBs
Position
3
Genome browser
AA seq
879 aa
AA seq
DB search
MDFGHPHQNMGMPPPGMGMMGPPMGPPPGRNNIRHNFRPFNYQMRFPPQGPLNMTQDDFD
GKRLRKSVMRKTVDYNAAIIKALECRVWQRDWRDRHALQPDAMYTPDLLPPPSYPDNPIN
AVTTRFVKTATNKMRCPIFAVAWTPEGRRLITGASSGEFTLWNGLTFNFETILQAHDSPV
RSMVWSHGEGWMVTGDHSGFIKYWQSNMNNVKMYQAHKEAVRGISFSPSDSKIVTCSDDG
TLRIFDFYRCQEERILRGHGADVKCVQWHPTKALIVSGSKDNQQPIKLWDPKSGTALSTL
HAHKSTVMDLKWNDNGNWLITASRDHLLKLFDIRKLGSELQIFRGHKKEASSVAWHPHHE
GLFCSGGSDGAILFWNVGTDKEVGCIEGAHESIVWTMAWHPLGHILCSGSNDHTSKFWTR
NRPGDLMRDKYNLNTLPPGVQDDQDLEEPTTIPGMGPEDKVEIFSSDTDKVIPGLDLDTT
FVPMEFEKKVKKVPYSKPIPRNFQAQWNHAPSAEESSTEVLSQALVESVPGSIPLEHINP
SAIFIYGKLIGVEPGSKLEKAITEGHVSLRKYIASGELEELHDVMPHLEDDADEENFQPF
EYPDQNENENGDEDEQNNKEDYERDEEYYDNDMDKNGTHDSEKTAKYNNGPDMSNMQQVT
NMPLVMNNMMRPPMGMGPIRPPMRPPLGSMHMPPPHMSGMPPMGAMPPLGNMPPMGNLPP
RGSMPPMGNMPPMGNMPPMGNMPPMGNMPPMGVMPPLGNLPPRSSFNDNGYNKSQFDSNY
ENQQYSQNDEEYNEEESYDQNYEEESNYNEDEKGDEGFSRNQRWEHGYRGRTRVRGRGMN
GYGGRGNRRGNNGSRGSPRNRRGGGHNRNFRRGSKSVSN
NT seq
2640 nt
NT seq
+upstream
nt +downstream
nt
atggatttcggacatcctcaccagaacatgggtatgcccccgccgggcatgggtatgatg
ggtccacccatgggcccgccaccggggcggaacaacattcgccataactttagacctttc
aactaccagatgcgatttccaccacagggccctcttaatatgacacaagatgatttcgac
ggtaaacgtttgcgtaaatcagtaatgcgtaaaactgtagattataacgcggctattata
aaagcattagaatgccgcgtttggcaaagagactggcgcgatagacatgcgcttcaaccg
gacgctatgtacacccctgaccttttacctcctccttcatatcctgataatccaataaat
gccgttacaacacgttttgttaaaacagccactaataaaatgagatgtcctatctttgct
gtagcatggactcctgaaggtagaagattaataacaggtgcttcctcaggagaatttaca
ctatggaatggattaacatttaactttgaaaccattctccaagctcatgactcaccagta
agatcaatggtttggtcacatggagaaggctggatggtaactggagaccattcaggattt
ataaaatactggcagagtaatatgaataatgttaaaatgtatcaagctcataaagaagct
gtaagaggaatcagtttcagccctagtgattctaaaatagtaacatgttcagatgatggc
acgctcaggatatttgatttctatagatgtcaagaagaaagaatattgagaggtcatggt
gccgatgtgaaatgtgttcaatggcatccaactaaagcactcattgtatcaggcagtaaa
gacaaccaacagcctattaaattatgggatccaaaatcagggacagcattgtcaactctt
catgctcataaatctacagtaatggacttaaagtggaatgataatggtaactggctaata
actgcatcccgtgatcatttacttaaattatttgacatacgtaagctagggtctgaactg
caaatttttagaggacacaaaaaggaagcttccagtgtggcatggcatccacatcatgaa
ggcttattttgttctgggggatctgatggagctattttattttggaatgtaggtactgat
aaagaagttggttgtattgaaggagcacatgaatctattgtctggacaatggcttggcat
ccactgggtcatatattgtgctcaggttcaaatgaccatacttctaaattttggactcgg
aaccgtccaggtgaccttatgagagacaaatataatttgaataccttacctcccggagtt
caagatgatcaagacttggaagaacctactacaattcctggtatgggacctgaagataaa
gtagaaatattttcctctgatacagataaagttattcctgggttagatttagatactaca
tttgttcctatggaatttgagaagaaagttaaaaaagttccatatagtaaacctattcct
cgaaacttccaagcccaatggaatcatgctcctagtgctgaagaatcttctacagaagtc
ctgagccaggctctagttgaatcagtcccaggctccataccacttgaacacatcaatcca
tccgccatattcatttatggaaaattaattggagtagaacctgggtctaaacttgagaaa
gcaataactgaaggacatgtttctcttagaaaatatatagctagtggggaactagaagag
ttgcatgatgttatgcctcatttagaagatgatgccgatgaagaaaactttcaaccattt
gaataccctgaccaaaatgaaaatgaaaatggtgatgaagatgaacaaaataacaaagaa
gattatgaacgagatgaagaatactatgataatgatatggataaaaatggaacccatgat
tcagaaaaaactgcaaaatataataatggcccagacatgtctaacatgcaacaggtgact
aatatgccactagttatgaataacatgatgagaccccctatgggtatgggaccaattaga
ccccctatgagaccaccccttggttctatgcacatgcctcctccacacatgtcaggcatg
ccacccatgggtgctatgccacccttaggaaatatgcctccaatgggaaatttgccacca
agaggtagtatgccaccaatgggaaatatgcctccaatgggaaatatgcccccaatggga
aatatgcccccaatgggtaacatgccaccaatgggagtcatgccacccttgggaaacttg
ccaccacggtcttcctttaatgacaatggttacaataaatctcagtttgattctaattat
gaaaatcagcaatattcacaaaatgatgaagaatataatgaggaagaatcttatgatcaa
aattatgaagaagaaagtaattacaatgaagacgagaaaggtgatgaaggattttctaga
aatcagcgatgggagcatggttataggggaaggactcgtgttagaggtcgaggtatgaat
ggttatggaggacgtggtaatcgacgcggcaacaatggctccagaggatcaccacgaaat
cgacgaggtggtggtcataacagaaactttagacgaggcagtaaatccgtttcaaattag
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