Bombyx mori (domestic silkworm): 101737197
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Entry
101737197 CDS
T02817
Name
(RefSeq) cleavage and polyadenylation specificity factor 73 isoform X1
KO
K14403
cleavage and polyadenylation specificity factor subunit 3 [EC:3.1.27.-]
Organism
bmor
Bombyx mori (domestic silkworm)
Pathway
bmor03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
bmor00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
101737197
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bmor03021
]
101737197
03019 Messenger RNA biogenesis [BR:
bmor03019
]
101737197
Transcription machinery [BR:
bmor03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
101737197
Messenger RNA biogenesis [BR:
bmor03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
101737197
U7-dependent histone pre-mRNA processing factors
101737197
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CPSF73-100_C
Beta-Casp
Lactamase_B_6
Lactamase_B
RMMBL
Anti-Pycsar_Apyc1
Lactamase_B_2
Lactamase_B_3
Motif
Other DBs
NCBI-GeneID:
101737197
NCBI-ProteinID:
XP_037873564
UniProt:
A0A8R2R4Q7
LinkDB
All DBs
Position
19
Genome browser
AA seq
692 aa
AA seq
DB search
MTTNPRKGTDPVPAEESDQLTIRPLGAGQEVGRSCIMLEFKGKKIMLDCGIHPGLSGMDA
LPFIDLIEADEVDLLLVSHFHLDHSGALPWFLTKTSFKGRVFMTHATKAIYRWLVSDYIK
VSNISTEQMLYTESDLENSMDRIETINFHEERDVRGVKFWAYNAGHVLGAAMFMIEIAGV
KILYTGDFSRQEDRHLMAAEIPTVHPDVLITESTYGTHIHEKREERESRFTGLVSDIVGR
GGRCLIPVFALGRAQELLLILDEYWSLHPELQDIPIYYASSLAKKCMAVYQTYVNAMNDR
IRRQIAINNPFVFRHISNLKGIDHFEDIGPCVIMASPGMMQSGLSRELFESWCTDPKNGV
IIAGYCVEGTLAKTILSEPDEITTMSGQKLPLRMSVDYISFSAHTDYQQTSEFINILKPP
HVVLVHGEQNEMSRLRAALEREHRGAILVHTPRNTQPLALCFRGDTTAKVMGSLAVDPPK
EGQELQGILVKRNFNYHILAPADLNKYTELVQSEVTQRQSLQYAGSVPLLRHVLMQLAGH
IDFLSETRWRLYSCIELTIESSTIVLEWRAGPVADMYADALVGAALSAAALAAPAATHPP
LAPKLDRMHFKECVIEMFQDMFGEDSVPKMFKGDKLYVTVDDKRADIDLQSMEVRCPEEP
SLASCVRSALQHLHAALSPVRPPPGAPPPADS
NT seq
2079 nt
NT seq
+upstream
nt +downstream
nt
atgactacaaatccaagaaaaggcactgatccagtgcctgcggaggaaagcgatcaattg
acaataagaccacttggagctggccaagaagttggcagatcatgcatcatgttggagttc
aaagggaaaaagataatgttggactgtggcatccatcctggtttgtctggaatggacgcc
ctacccttcatagaccttatagaggcagacgaagtggatcttctgttagtttcacatttt
catttggaccacagtggagcccttccgtggttcctgacgaagacttccttcaaaggtcga
gttttcatgacacatgccactaaggctatctacagatggctcgtttctgattatattaaa
gttagcaacatatcaacagaacaaatgttgtatacggaatcggatctagaaaattcaatg
gacagaatagaaactataaacttccatgaagaaagagatgtacggggtgtcaaattttgg
gcttacaatgctggacatgtactcggagcagccatgtttatgattgaaatagctggagtc
aagatattatacacgggagatttttcaagacaagaggatagacatttgatggctgcagag
ataccgacggttcatcctgatgttttgattactgagtccacgtacggcacgcacatccac
gagaagcgcgaggagcgggagagtcgcttcacggggctggtcagcgacatcgtggggcgc
ggcggccgctgcctcatccccgtgttcgcgctgggccgcgcgcaggagctgctgctcata
ctcgacgagtactggtcgctgcaccccgagctgcaagacattcccatatactacgcgtcc
tcactggccaagaagtgcatggcggtgtaccagacctatgttaacgcgatgaacgaccgc
atccggcgccagatcgctatcaacaaccccttcgtgtttagacacatctccaacctgaag
ggcatagaccactttgaggacatagggccgtgcgtgatcatggcgtccccgggcatgatg
cagtcgggactgtctcgggagctgttcgagtcctggtgcaccgaccctaagaacggagtc
atcatagcgggttactgcgtggaggggacgctggcgaagacgatcctgtcggagccggac
gagattacgaccatgtccggccagaagttgccgctgcggatgtccgtggactacatctcg
ttctcggcgcacaccgactaccagcagacctcggagttcatcaacatcctgaagccgccg
cacgtggtgctggtgcacggcgagcagaacgagatgtcccggctgcgcgcggcgctggag
cgggagcaccgcggcgccatcctcgtgcacacgccgcgcaacacgcagcccctcgcgctc
tgcttccgcggagacaccaccgccaaggtgatgggctccctggcggtagaccctcccaag
gaaggtcaggagctgcagggcatcctcgtcaaaagaaacttcaattatcacattctggcg
cccgcagacctcaacaagtacacggagctggtccagtcggaggtgacgcagcggcagtcg
ctgcagtacgcgggctcggtcccgctgctgcgccacgtgctcatgcagctcgccggacac
atcgacttcctctcggagaccaggtggcgcctctactcctgcatcgagctcaccatcgag
agcagcaccatagtgctcgaatggcgcgccgggcccgtggccgacatgtacgccgacgcg
ctggtgggcgccgcgctgtccgccgccgcgctcgccgcgcccgccgccacgcacccgccg
ctcgcgcccaagctcgaccgcatgcacttcaaggagtgcgttatagaaatgttccaagac
atgttcggtgaagactccgtgccgaagatgtttaagggcgacaagctgtacgtcaccgtc
gacgacaagcgcgccgacatcgacctgcagagcatggaggtccggtgtcccgaggagccg
tcgctggcgtcgtgcgtaaggtcggcgctgcagcacctgcacgccgcgttgtcccccgtg
cgcccgccccccggcgccccgccccccgccgactcgtga
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