Bombyx mori (domestic silkworm): 101737883
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Entry
101737883 CDS
T02817
Name
(RefSeq) collagen alpha-1(I) chain isoform X6
KO
K06823
collagen type XVIII alpha
Organism
bmor
Bombyx mori (domestic silkworm)
Brite
KEGG Orthology (KO) [BR:
bmor00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
bmor04147
]
101737883
00535 Proteoglycans [BR:
bmor00535
]
101737883
00536 Glycosaminoglycan binding proteins [BR:
bmor00536
]
101737883
Exosome [BR:
bmor04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
101737883
Proteoglycans [BR:
bmor00535
]
Extracellular matrix (ECM) proteoglycans
Basement membrane proteoglycans
101737883
Glycosaminoglycan binding proteins [BR:
bmor00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
101737883
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Endostatin
Collagen
Collagen_trimer
DUF1554
Motif
Other DBs
NCBI-GeneID:
101737883
NCBI-ProteinID:
XP_004932979
UniProt:
A0A8R2ALT8
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Position
11:17770188..18012212
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AA seq
942 aa
AA seq
DB search
MNMSVRGLLIFVVVQGAFQELKLYGSPSQAEVQCVNTFEEIDKSGEGDEIDIDNFLVDQE
EDSEGSGRYGTIPPFPPPPPGLDGYSLRLRGDKGERGPRGPPGESIRGPPGPPGPPGPPG
PPGTATESSGSGDDQIFGENYASLGQCGCNASTIMSLLQTAPELRGSPGPPGMIGADGRA
GPPGMPGQPGTPGERGPVGPRGDKGDRGDAGTRGHEGQPGPKGEAGVDGRPGTAGPPGPP
GPPGTPDYNNFEESLMGAYGSAIGRPGAPGPKGDSGQPGPMGPQGERGFPGQKGERGQNG
AVGAKGDRGHPGPQGDRGVKGDRGNPGFDGRPGIPGANGRPADKGEKGERGEPGPPGSPP
AGVFNAADPEFMVAGSQVTGAKGDKGEKGEKGTRGNDGPPGFPGKDGKQGERGDIGPSGL
PGMAGSPGPQGFKGDRGERGPPGPISVASAGTDIITIKGDKGEPGARGRRGRSGPGGARG
ATGAPGPPGPAGRPGDKGDTGLPGWMGRPGTLGPPGAPGPVGPKGEKGDPGVNILDVSMF
KGEKGDRGFDGVPGVQGPPGPPGKPASEPVQYLPGPPGPPGPPGSPGTPGVSVVGPKGEP
GVSYYEEGPVHGSPKFYGRPGFSARSQPADESSAQKTVPGAAVFQTTEEMMKLASSSPVG
ALAYVAEEQALFVKVNSGWQYVLLGSLVTQSKPPPTPAPAPLPMPAASLVHVPPISNLVE
NSPTPIGPSLRMAALNDPLSGNMHGVRRADYACYRQARRAGLRGTFRAFLTSRIQNLDST
VRYADRHLPVLNTQGDVLFKSFSDIFDGSGGIVAGTPRIYSFNGKNIITDSHWPQKLIWH
GSHASGERALDTFCEEWQSNDPTNKGMAASLYSHKILSQERYSCNNHFAVLCIEATSNVS
VRRKRDTHRFNTTEDSDEDYEMRPDEYEELINDIIAQPLRYN
NT seq
2829 nt
NT seq
+upstream
nt +downstream
nt
atgaacatgtccgtccgtggtttgttgatcttcgttgtggtgcagggcgcgtttcaagag
ctgaagctatacggatcgccgtcacaagccgaggtgcaatgtgtcaacactttcgaggaa
atagataaaagcggcgaaggagacgaaatcgatattgacaacttcttggtggaccaggag
gaagacagcgagggttcagggagatatggaacgataccgccatttccgcctccacctccg
ggcttagatggttactctctcagacttcgtggagataaaggagaaagaggaccgagggga
cccccaggggaatcaatcaggggtccgccaggtcctcctgggccgcccgggccccccggt
cctccagggaccgctaccgagagctctggatctggtgatgatcaaattttcggggaaaac
tacgcttcacttggacaatgcggctgtaatgctagcactatcatgtctttgctacaaact
gcgcctgaattaagggggtcacctggtcccccggggatgatcggggcagatggaagggcc
ggtcctcctggtatgccgggtcagcctggtactcctggtgagcgtgggcccgtaggaccc
cgcggtgataaaggcgatcgtggagacgccggtacaagaggtcacgaaggacaacccggc
cctaaaggtgaagccggtgtggacggacgacctggcactgctggccctccggggcctcct
ggaccaccaggaacaccagattacaacaatttcgaagaatctttaatgggagcatatgga
agtgctatcggtagacctggtgctccagggccaaaaggcgattcggggcaacctggccca
atgggaccgcagggagaaagaggattccctggacaaaagggagagagaggacagaatggt
gcggtaggcgccaaaggggatcggggtcatccgggacctcaaggcgatcgaggtgttaaa
ggtgatcgtggaaacccaggattcgacggaagaccaggcattcctggtgccaacggacgt
ccagcagataaaggcgaaaagggtgaacgtggggagccaggacctccagggtcaccacca
gctggagtttttaatgctgcagatccagaatttatggttgcagggtcgcaagtgacaggt
gctaagggtgacaagggagaaaagggtgaaaaaggaactcgaggtaatgatggcccacca
gggttcccagggaaggacgggaagcaaggggaacgaggtgacattggaccttcaggtcta
ccaggcatggccggatcccctggaccacagggctttaagggagaccgaggagaaagaggc
cctccaggacctatcagtgttgcttcagcagggaccgatatcataactattaagggtgat
aaaggagaaccaggtgcccgcgggcgtaggggccgcagcgggccagggggcgcgcggggg
gccacgggcgcccccggaccgcccgggcccgccggccgccccggggacaagggggacact
ggactacccggctggatgggccgtccgggaaccctgggcccgccaggagcaccaggacca
gttggaccgaaaggcgaaaagggcgacccgggagtcaacattttggacgtctcaatgttc
aaaggtgaaaaaggcgatcggggattcgacggagtaccaggagtacaaggtccacccgga
cctccaggaaaaccagcgtccgaaccagtgcagtatcttcctgggccgcctggcccgccc
ggaccacctggttctcccggtacgcctggagtatctgtggtgggtcctaaaggtgaacca
ggggtcagctattacgaagagggacctgtccacggcagtcctaaattctacgggagacca
gggttcagcgcgcggagtcaaccggcggatgaatccagcgcgcagaagacggttccaggg
gcagccgtgttccaaacaacagaagaaatgatgaagctcgcctcgtccagcccggtgggc
gcgctggcgtatgttgcagaagaacaagctttgttcgtcaaagttaattccggctggcaa
tatgtattgcttggctctctagtgactcagtcgaagcctccgccgacgccggcgccagcc
cccctaccgatgccagcggcgagcctagttcatgtaccgcctatctctaatctagtcgaa
aattcaccaacaccaatcggtcctagtcttcgcatggccgcgctcaacgacccgctatcg
ggcaatatgcacggcgtgcgccgcgcggactacgcgtgctacagacaggcgcgccgcgcg
gggctgcgggggaccttccgagccttcctcaccagcagaattcagaatttagattcgaca
gtgagatacgcggatcgtcacctccctgtcctgaatactcaaggagacgtgctcttcaag
tcattctcggacatatttgacgggagcggagggatcgtggcagggaccccaaggatctac
agtttcaatgggaaaaacatcatcactgattcgcattggcctcagaagttgatatggcac
ggatctcacgccagcggggagagagccttggataccttctgcgaggaatggcagagtaac
gatccgaccaacaagggaatggcggcttcactatattcgcacaaaatattatcacaggag
agatactcgtgtaacaatcatttcgccgtgctgtgcatagaggcaacgtcaaatgtcagc
gtacgaagaaaaagagacacccatagatttaatactacagaagattcagacgaagactac
gagatgaggccggacgagtacgaagaactgatcaacgatataattgctcaaccgcttaga
tacaattaa
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