Bombyx mori (domestic silkworm): 101739030
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Entry
101739030 CDS
T02817
Name
(RefSeq) nuclear RNA export factor 1
KO
K14284
nuclear RNA export factor
Organism
bmor
Bombyx mori (domestic silkworm)
Pathway
bmor03008
Ribosome biogenesis in eukaryotes
bmor03013
Nucleocytoplasmic transport
bmor03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
bmor00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
101739030
03015 mRNA surveillance pathway
101739030
03008 Ribosome biogenesis in eukaryotes
101739030
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bmor03019
]
101739030
03009 Ribosome biogenesis [BR:
bmor03009
]
101739030
Messenger RNA biogenesis [BR:
bmor03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
101739030
mRNA cycle factors
Stress granule specific factors
101739030
Ribosome biogenesis [BR:
bmor03009
]
Eukaryotic type
Pre-60S particles
Export and cytoplasmic maturation factors
101739030
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NXF_NTF2
LRR_NXF1-5
Tap-RNA_bind
TAP_C
NTF2
LRR_4
LRR_8
LRR_9
Motif
Other DBs
NCBI-GeneID:
101739030
NCBI-ProteinID:
XP_004928198
UniProt:
A0A8R2ANE9
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Position
18:4531172..4541130
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AA seq
613 aa
AA seq
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MPKRGGGRNRNWKADTDHFEHDDRVNSVPRHVSFKPGAKGKNKFRTWKNPLALLDDDIDM
GSSALQGPVRKSSFRGRGRMYSPAPQGSHGHTKKKFIPGVLPWYQIIIPYGAKHEKDVIL
RALLGFLSPDIFIPHYYKVNGNAAVFYVDDVKTAEKLYNADRKITMSDGFKLIVIVRNAV
PNMAIDAAMKEKMKLTMAKRYNATTKALDLTKFHADPDLEDIFCALFRPMIMLAAIDIIA
ENIPDIEALNLNDNKLHGLQHLKVLSSKLKNLKILYMGDNRIPFLGSLDPIRSLPLVELY
LKGNPLVNRFHDHEIYISDVRKKFPKLTRLDGADLPPAIGFDVAEDMGLPPRQQSFLVDP
AGQDLVREFLTQYYAIYDSESRQPLLEAYHENATMSMAANYLTNDSRNSTTTRLNSYISN
SRNLTRITERESRRRYLRTGKLQVVSFLSDLPKTTHDLMGFAVDLLVFTPAMIVLTMNGV
FKETNTPNNPMRSFHRTFVIVSNANGGFSIINDMLYITNTTKEQEDKAFSTGTVEPIPPT
PAPTPTPTPTLAAGTPDDSQKMQLLNMLGQQTGMNEHWSINCLQETGWDLQRAMFIFNQL
HSEGKIPPEAFVK
NT seq
1842 nt
NT seq
+upstream
nt +downstream
nt
atgccaaaacgtggcggtggaaggaatagaaattggaaggctgatactgaccattttgaa
cacgatgaccgtgtcaatagtgtgccgagacatgtcagttttaaacctggagctaaagga
aaaaataaatttcgaacttggaaaaatcctttagccctccttgatgatgatattgacatg
ggtagttctgctcttcaaggaccggtccggaaaagttctttcaggggacgtgggagaatg
tactctccagctccgcaaggaagccacggacacactaaaaagaaatttattcctggtgta
ctgccttggtaccaaataatcattccatatggagcaaaacatgaaaaagatgttatcctc
cgagccttgttgggttttctttcacccgacatattcattccacattactataaagtcaat
ggaaatgctgcagtattctatgttgatgatgtcaaaacagctgaaaaactttataatgct
gatagaaagatcactatgtcagatggttttaagttaattgttattgtgaggaatgctgtt
ccaaacatggccattgacgctgccatgaaagagaagatgaaattgacaatggcgaagagg
tataatgctacaactaaggcattagatttaacaaaattccatgctgatccagatctagaa
gatatattttgtgcactgttccgtccaatgataatgttggctgctatagatataatagca
gagaatattccagacatagaagctttgaacctaaatgataataagcttcatggtttgcag
catctcaaggttttgtcttcaaagctcaagaatttgaaaatattgtatatgggcgataat
aggattccattccttggatcactggacccaatcagatcattaccgctagttgagctatac
ctcaaaggaaacccactggtgaacaggtttcatgatcacgaaatctacataagtgatgtc
cggaagaagtttcccaagctgacaagattggatggcgcggatcttccaccggctattgga
ttcgacgtagctgaagatatgggacttccccctcggcaacaatcgttcctggtagacccg
gcgggtcaggatcttgtcagggagtttctcactcaatactatgcgatatacgactcggaa
tctcggcaaccacttctagaggcgtaccatgaaaatgctacaatgtcgatggctgcaaat
tatttaactaatgacagcaggaattctacgacaactaggttaaactcttacatatcgaac
agccgtaatttaacccgaataacagaaagggagtcgagaaggcgttacctacgtaccgga
aagctgcaagtagtctcctttctatcagatctgccaaaaacaacacacgatttaatgggt
tttgctgtcgacttactagtctttactccggccatgatcgtccttacaatgaacggtgtg
ttcaaagaaacgaacactcccaataacccgatgcgttcgtttcatcggacgttcgtgata
gtttcaaatgcgaatggcggcttctcaatcatcaacgatatgttatatatcacgaatact
actaaagaacaggaggataaggccttttcaacgggtactgtagaaccgattccacctact
ccagcgcccacgcctactcctactcccacgctcgcagctgggacgccagatgattctcag
aagatgcagctactcaacatgcttggtcaacaaactggaatgaatgagcattggagtatc
aattgtcttcaagaaactggctgggatttgcaaagggctatgttcatctttaatcaacta
cactccgaaggcaagataccgcctgaagcctttgtaaagtga
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