Bombyx mori (domestic silkworm): 101739199
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Entry
101739199 CDS
T02817
Name
(RefSeq) CCR4-NOT transcription complex subunit 1 isoform X5
KO
K12604
CCR4-NOT transcription complex subunit 1
Organism
bmor
Bombyx mori (domestic silkworm)
Pathway
bmor03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bmor00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
101739199
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bmor03019
]
101739199
Messenger RNA biogenesis [BR:
bmor03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
101739199
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
101739199
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Not1
NOT1_connector
CNOT1_CAF1_bind
ARM_Cnot1
CNOT1_TTP_bind
DUF3819
CNOT1_HEAT
CNOT1_1st
Pet127
Motif
Other DBs
NCBI-GeneID:
101739199
NCBI-ProteinID:
XP_004933190
UniProt:
A0A8R2ARS2
LinkDB
All DBs
Position
1:complement(17952609..17978408)
Genome browser
AA seq
2384 aa
AA seq
DB search
MNLDSLTLSLSHIHYLVVNLNKKNFKQTSQELNQIVSVYGLEAENQVLRCLLTEAARIAW
DGDRTTSAATNSIHASLLGQQLAGLLNHPAKSTVVCRAVDHPTRSVTKLLKPTNALLNRL
SRLLKLTTAEDVAFSLALRRYSTKSEIVAVAKQHLKKRFLDLIQCYLDAERGHQAERAGL
QECSPEVLQSLLTSLALDNIKLAAVTKDLFLKRLRSDFPREVVPIVLAPLIYPDDTQTPL
EEMTSADDMAAAMMENSLPDIIRDMGHAFTTSVEDCKNNMINFGAREPTAIDVARIIAVM
VRYHSNQQDGPQIQTPGNFWMSHEAKKEPAAHPHSEWNAEVFVQTLKELASNLNWKEVIL
QLDHPEFFVPDRTGLSLLFTILRLGLQSAGYPANIFPVEYLCRRWTNLEGQMSLISHILK
HSDVFCFADHPFHPVSIDILKSPPETDNKEVGTWRCLYLVELLLYAAERGYYMQVHELFK
MPLQHCPDILLLVLLQISPPITVFRQELLTTLIPIFLGNHPNSGIILHHAWHTQNPNIKP
IIMHSMADWYIRGESDQSKLSRILDVAQDLKALSLLLNVQSFPFVIDLACLASRREYLKL
DKWLTDKIRDHGETFVSAMVKFLQRRCPQVLGKAPEEQLPKAAQLPPETITTMLACLQLC
IPNVSQELQEAIYNVIGSCQTLILSKTRQNIAGIARPHTRVMETQFNPAGLGGQLFTPHV
DAIGNLAPGMANMTLGAPANTAFAMPGTLGPLVTTPGSPVRLLGGGPNSPFAMMPLPPNA
NLGALARMAPAPAIDKPRLQDPIPFPEVMHTVAKEIEDEANSYFQRIYNHPPHPTLSIDE
VLDMLKKFQDSPNKREREVFSCMLRNLFEEYKFFPQYPDKELQITAQLFGGIIERGLVPS
YVSLGLALRFVLDALRKAEGSKMYYFGIAALDRFKSRLKDYHKYCEHVRAIPHFSEFPPH
LIEYVEYGLQSQEPPNKPQGPVLPATLAAILNQSAVVTVSAPYRPVVCAPPSISVMSKMA
ACPAGSMGSRPSIANATNIDTLLTATDREEKINAPPEPIQDKTAFIFNNLSQLNLQTKCE
ELKEVLTDEYYPWLSQYLVMKRASIELNFHALYSNFLDVLKVREVNKLVTKETYRNIRVL
LRSDKGIANFSDRSLLKNLGHWLGMLTLARNQPILLLDLDLKALVLEAYHKGQQELLYVV
PFVAKVLESCAKSVVFKPPNPWTMALMNVLAELHQEPDLKLNLKFEIEVLCKNLGLDIMD
LKPSLYLKDPEKLRQIEFQLSQPKPNKEAANTMPVNPPIQVPPPQIPIMPPQPPMIPAEE
MAGPVPPPPTGLVPADPGLMGVLGMPEPRFNYLDVNVSSTSAFGQKICFNPHIILFQNYP
HLKQFVKPAIERSIQEWIHPVVDRSIKYALTTCEQIIRKDFALDPDEVRMRTCAHHMMRN
LTAGMAMITCREQIITTISTNLKAAFITALMPSTQQQKEIIESAAAVLATENMELACAFI
QKTAVEKALPELDKRLISDYEMRKLARQEGRRYYDTIVVTYQTERIPERVRLRVGGPTDM
QISVYEEFACNIPGFVPVRDAGMFIPKPSQEQIPQLFMNPAQVYGADEMGALINTAELFL
ANSLGVASLAVQAANMHTLLECLFMARRSRDIVSGCTLLQKAVDGLLDGHLVPPGASNEH
IEMMARYRDIHLRVLKLLEDARVYGHVWTSKQITCCLIECREELRYNIEAVDCLIRNHLV
NLPQYDIALAHMMDNGNNYVAVAFAMQLVQLYLVDDRNNMYVNESDLYHTTEMLVRVMSH
SRTPPPEGLGSLIEILRVNQDPSAYLGERSPLGPTAHIHSGILQVRAQNYDDPPGLQEKT
ENLLREWRNVLLSPLTEIELAQNFNLYVHRMNMNGILKSDDMIARFFRMASQMCIENVYQ
LLNEDRVNPPPVPQKREKFYTMCDSFIKLVSLLIKNTADSGNPTPKLNLLNKILGIIVGW
LLQDHDDQGTNFQQLPYHRLLLILFLDMNMAEPVLESMNYQVLTAFCHTLRIIKPSVAPG
FCYAWLEIVAHRAFINRVLAVTPQQKGWGMYSTLLIELFKFLDPFLRNTELAPPVMTLYK
GTLKVLLVLLHDFPEFLCDYHYGFCDEIPPNCIQMRNLILSAFPRNMRLPDPFTPNLKVD
LLPEIALPPRAVINYSTIISASQFKKDLDAYLKARAPVTFLSELRGNMQVANEPGKRYNS
QLMNAVVLYVGTQAIAYIRAKGQTPNMSTIAHSAHMDIFQNFTVDFDFEGRYLFLNAIAN
QLRYPNSHTHYFSCCLLYLFAEANSEAVQEQITRMLLERLIVNRPHPWGLLITFIELIKN
PIYKFWSHEFVHCAPEIEKLFASVARSCIADTTGGGGGEREAAE
NT seq
7155 nt
NT seq
+upstream
nt +downstream
nt
atgaacctggactctttaacgttgagcttatcgcatatacattatctcgtcgtaaattta
aacaagaaaaatttcaagcagacgagtcaagaattgaatcagattgtcagtgtctatggc
ttggaagcagagaatcaagttttaagatgtcttctcactgaagcggcaaggatagcttgg
gacggagaccgtacaacttctgcagctactaatagcatccacgcctcccttcttggacaa
cagttggcaggcttgctcaatcatccagctaaatcaacagttgtttgccgggctgttgat
catccaacacgctctgtaacaaagctattaaagcctacaaatgcactattgaatcgacta
tctagactgttgaagttaactacagcagaggatgttgccttttcattggctctgagaagg
tattcaacaaagagtgagatagttgcagttgcaaagcagcacttgaagaaaagattcttg
gatttaatacagtgctatctcgacgcagaacggggacatcaggcggagcgtgcaggactt
caggaatgcagccctgaagtgttgcagtcactcctcacgagtctcgcgctcgacaatatc
aaattagcggcagttacgaaggatttgtttttgaagagactgagatcagacttccctcgt
gaagtagtcccgatagtactcgcaccgttgatttatccggacgacactcagacacctctc
gaggaaatgacttcagccgatgatatggctgctgccatgatggagaattccctgccagat
attatccgagatatgggccatgcttttacaacttcagttgaggattgcaagaacaatatg
ataaactttggtgcgagagaaccaaccgcaatagacgtggctagaatcatagctgtgatg
gttcgctatcacagtaaccaacaagacggtccgcaaatacagacaccaggcaacttttgg
atgagtcatgaagctaaaaaagaaccagctgcacatccacacagtgaatggaatgctgaa
gtatttgttcagacattaaaagaattagcatctaatctgaactggaaggaagtgatacta
cagctggatcacccagaattctttgtaccagaccgaacaggactatccctactattcacc
atactgagacttggtctacagagcgccggctatccggccaatatattccccgttgagtat
ttatgccgacggtggacgaatttggaaggacagatgagtttgatcagccacattctcaaa
cattctgacgtattctgttttgccgatcatccttttcatccagtatcaatagacattttg
aaatctcctcctgagaccgacaacaaagaagtgggcacttggcgttgcctctacttagtg
gagttactgctgtatgctgcagagcgtggttattacatgcaagtccatgaactctttaaa
atgccacttcaacattgtcccgatattttgctcttagttttactgcaaatcagtccaccg
attactgtctttaggcaagagttattgacgacactgattccaatatttctaggtaatcat
ccaaattcaggcataattctccaccacgcctggcatacacagaaccctaacataaaacct
atcatcatgcactcaatggcagattggtacatacgcggtgagagtgaccaatccaaatta
tctagaattttggacgtcgcacaggatttaaaggcgctgtcgctcttattgaatgtacaa
tcgttcccgtttgttattgatttggcttgtttggcgtctaggagggagtatctcaaatta
gataaatggttgaccgacaaaatcagagatcacggtgagacgtttgtgtcggctatggtg
aaatttttacaaaggcgatgtccacaggtgctcggcaaggcacccgaagaacaattgcct
aaggctgcgcagctgccacccgaaacgattacaacaatgttggcttgcttacaactatgc
attccaaatgtttctcaagaattacaggaggctatttacaacgtaataggaagctgtcag
acgttaatactcagcaaaacacgacaaaacattgcgggaatagcaagacctcatacaagg
gtcatggaaactcaattcaatccagctggcctaggagggcaattgtttacaccccacgtt
gacgctatcggtaatttggcaccgggcatggcaaatatgactttaggtgcccccgcgaat
actgcatttgctatgcccggtacactcggaccactcgtaaccactccgggctctcctgtt
aggctacttggaggcggacctaacagtccgtttgccatgatgccgttaccgcccaacgca
aacctcggagcgctcgcgagaatggctcccgctcccgcgattgataaacctcgtctgcag
gatcccattcccttcccggaagtgatgcacaccgttgctaaggaaatcgaggacgaagca
aacagttacttccaaaggatatacaatcatcctccacatccgactttatcaatagacgaa
gtactagatatgctcaaaaaatttcaggattcccctaacaagagggaacgggaagtattc
tcatgcatgttgcgtaatctttttgaagagtataagtttttcccccaataccccgacaaa
gagttacaaattactgctcaactgtttggcggtatcatcgaaagaggattagtcccaagc
tacgtgtctttagggttagcgttgcgtttcgttcttgatgctttacgaaaggccgaggga
tcgaaaatgtattatttcggaattgcggctttagatcgttttaaatctcgtcttaaagat
tatcacaaatattgtgagcacgttcgcgctattccgcattttagtgaattccctccccat
ttgatcgaatatgtcgaatatggcttacaaagccaagaacctcccaataaaccccagggg
ccggtacttcctgctacgttggctgctattcttaatcagagtgccgttgtaactgtctcg
gcgccttataggccagtagtttgtgctcctccatctatttcggtgatgtcgaaaatggcc
gcgtgccctgctggaagcatgggtagtaggccatctatcgcgaacgctacaaatatcgac
actcttttgactgctactgacagggaagaaaaaattaatgccccaccagaacccatacaa
gataaaactgctttcatttttaacaatcttagtcaacttaatttgcaaaccaaatgtgaa
gaacttaaggaagtacttaccgatgaatactatccctggctttctcagtaccttgttatg
aagagagcctctattgaactcaatttccatgctttgtattctaatttccttgatgttctt
aaagtccgcgaagtaaataaattagtcacaaaggaaacttatcgcaatatccgtgtgtta
ttgcgttcagataaaggaatcgctaatttctcggatcgatcgcttctcaagaatcttggt
cactggctcggcatgctaacacttgcaagaaaccagccgattctcctcctcgacttggat
ttaaaggcgttggtcctcgaagcctatcataaaggccagcaagaactgctttatgtggtt
cctttcgttgcgaaagttttagaatcttgcgcgaaaagtgtagtatttaaacctccgaac
ccgtggacgatggcccttatgaacgttctagcagaactacatcaagaacccgacttgaaa
ttgaacctaaaatttgaaatcgaagtattgtgtaaaaacttaggcctggacataatggat
ttgaagccttccctttacttgaaagaccctgaaaaattgaggcagattgagttccaacta
tcacagccgaagccaaacaaagaagccgcaaatacaatgccggtcaacccgccaattcaa
gtaccaccgccgcagataccaataatgccgcctcagcctccgatgattcctgctgaagaa
atggcaggacctgtccctcctccaccaactggcttagtgcccgccgatcctggtctgatg
ggcgtgctcggtatgccagaacccaggttcaactatttggatgtgaacgtatcctccacg
tctgcgttcggacaaaagatttgtttcaaccctcacataatcttattccaaaactacccg
catcttaaacagtttgtaaagcccgcgatcgagagatcgatccaagaatggattcaccca
gtcgttgataggtctatcaagtatgctttgacaacttgtgaacagatcatacggaaggat
ttcgcattggaccctgacgaagttcgaatgcgtacctgcgctcatcacatgatgcgcaac
ttgactgccggcatggcaatgatcacatgccgagagcagatcatcaccaccatcagcact
aatctgaaggcagctttcatcactgctctcatgccatcaacacaacaacaaaaagaaatc
atcgagagtgcagctgctgtccttgctactgaaaacatggaactggcctgcgctttcatt
cagaagacagccgttgagaaggctctacctgaattagacaaacgcttgattagcgattac
gaaatgcgaaaactggcccgtcaagaaggccgccgctattatgacaccatcgtcgtgact
taccagactgaaaggatcccggaaagagtccgcctgcgcgtcggaggtccgacagacatg
cagatatcagtatacgaagagttcgcatgcaacattccgggatttgtccccgtcagagat
gcgggcatgttcatcccgaagccgtctcaagagcagattccacagctgttcatgaatcca
gctcaagtgtacggcgctgacgagatgggcgctctgataaacactgcggaactattcctt
gccaattccttaggtgtggcttccttggctgtccaggcagcgaacatgcatacgctgctc
gagtgcttgtttatggcgagacggagtcgcgatattgtgtctggctgtactctactgcag
aaggctgtagatggtttgcttgatggacatttagtcccacccggtgcgagcaacgaacac
atcgaaatgatggcccgctaccgcgacatccaccttcgtgtcctgaaactactcgaagac
gccagagtctatggacacgtttggacttccaagcagatcacctgctgcttgattgaatgc
agggaggaactccgatacaatatcgaggctgttgactgccttatcagaaaccatttggtt
aatctaccacagtatgatatcgcccttgctcatatgatggacaatggcaataactacgtg
gcggtagcattcgctatgcaactagtacagctgtatcttgtcgatgacagaaataacatg
tacgttaacgaatctgacttgtaccacacgaccgaaatgttagtgagggtcatgtcccac
tcaaggacgcctccgcccgagggtctgggctccctgatcgagattttgagggtgaatcag
gaccctagtgcatatttgggcgaaaggtcaccgctcggaccgacggcccacatacattct
ggaatactgcaagttcgagcacaaaactatgacgacccacccggacttcaagagaagact
gagaatttactccgtgaatggaggaatgttctcctcagtcctctgacagagatcgaactg
gcgcagaacttcaacttgtatgtccaccgaatgaacatgaacggcattctcaaatctgat
gacatgatcgctagattcttcagaatggcctcgcagatgtgcatcgagaatgtataccaa
cttctgaacgaggacagggttaatccacctccagtgcctcagaaacgtgagaaattctac
accatgtgcgactcttttatcaaacttgtctcgcttttgatcaagaatacagccgatagc
ggaaatcccactccgaaattaaaccttctgaacaagattctaggcattatagttggctgg
ctactccaggaccacgatgaccagggcaccaacttccagcagctaccgtaccaccgccta
ctcctgattctgttcctcgacatgaacatggctgagcctgttctagaatctatgaactat
caggttctgactgcgttctgccacacccttcgcattatcaaaccaagtgtcgctcccgga
ttctgttacgcgtggctcgagattgtggcccaccgtgccttcataaaccgcgtcctagct
gttactccacaacaaaagggctggggaatgtactcgaccttactcattgagctgttcaaa
ttccttgatccattcctgcgtaacactgagcttgctcctccggtcatgacgctatacaaa
ggaaccctcaaggtgttgttggtcttactccatgatttcccggagttcctgtgcgattac
cactatggtttctgtgacgaaatccccccgaactgcattcaaatgcgcaatttaatactg
tccgctttcccgcggaacatgaggcttcccgatccgttcacgccgaatctgaaagttgac
ttgctcccggaaattgctctaccgcctcgtgcggtcatcaactattctacgatcatctct
gcgtcacagttcaagaaggatttggacgcgtacctcaaagcgagagctccagttaccttc
ctgtctgaattaaggggaaatatgcaggttgcgaacgagcctggcaagcgatacaacagt
cagctgatgaacgcggttgtcttgtacgtcggcacacaggccattgcctatattcgtgct
aaagggcaaactccgaatatgtcgacgattgcacattcagctcacatggatatcttccag
aactttaccgtggatttcgattttgaaggccggtacctgttcttgaacgcgatagccaat
cagctgcgttacccgaacagtcacacgcactacttctcttgctgtctcctctacttgttc
gcggaggccaattcggaagcagtacaagaacagatcaccaggatgctcctggaacggctg
atcgtcaaccgtccgcacccttggggtctgctcatcactttcatcgaactaatcaagaat
cccatctacaaattctggtcccacgaatttgtacactgcgctccggagatagagaagctg
ttcgcttcggtggcgcgatcgtgcatcgccgacacaacgggtgggggagggggggagagg
gaagcggccgagtag
DBGET
integrated database retrieval system
