Bombyx mori (domestic silkworm): 101739231
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Entry
101739231 CDS
T02817
Name
(RefSeq) E3 ubiquitin-protein ligase listerin isoform X1
KO
K22377
E3 ubiquitin-protein ligase listerin [EC:
2.3.2.27
]
Organism
bmor
Bombyx mori (domestic silkworm)
Brite
KEGG Orthology (KO) [BR:
bmor00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
bmor03009
]
101739231
04121 Ubiquitin system [BR:
bmor04121
]
101739231
Enzymes [BR:
bmor01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
101739231
Ribosome biogenesis [BR:
bmor03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
101739231
Ubiquitin system [BR:
bmor04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
101739231
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ltn1_1st
zf-RING_2
UBC_like
zf-rbx1
FANCL_C
zf-RING-like
zf-ANAPC11
RINGv
zf-C3HC4_2
C1_1
zf-C3HC4
Motif
Other DBs
NCBI-GeneID:
101739231
NCBI-ProteinID:
XP_037868757
LinkDB
All DBs
Position
9:16658697..16679296
Genome browser
AA seq
1729 aa
AA seq
DB search
MGGNSKQSQRTKNNVRPSSSGRSAELLSNVKLESGLVSIAGGKVLPALFPTLTVATIDQE
ISPEFQICIKKLNKKDPITKTKGLQEMLETINNSKVDDVITILPSWAHFYKILAIDPDRK
VREYTQLCHSSVVRACGRRLAPRLRQLVPAWLQARHDEHGPAQAHARTSLASTFPDAKLP
EVLAFCKTEVMTHFLDNLIGTGEASISKKADSPEDKEQQVTRLISSSLLGLEYFVRQLPA
QHDAWLWAQLSALLHAAAFWKLAAHSSPRIRAGWAGAVGRLVQRFHSTFGDQFGAKTFRV
LLERTQDTELLVVAPLWTCLLLYTHSVQDWCEHLENKELLLKRMLELLENGGRGDAGLLR
AVLLPLLPRLPRDLLTKHFYEQFFDAIFVGLEKKNILSSKSERQSWLSGLAEALRHLARQ
DDDFVLEVVTSVHRAWLRRVLAPRSDQRLMHELIKCSASNMAACVKFWHQQSEDKYDQLI
RNFWQNVNFTLLSQIETLSDNTSDTASATAGHVLLVQTLKTSLLNEPKKQRSIKFEMDRD
EIAPEPATPEWSPAPDPAAALRFRRDLDDAVQRLVARYFELVGGSSHCEAVLAALATLLQ
EWEGGVRAAGAAALYRALLRPRLPASRAALLLAFRLLPHMDAPERDRVFDSFDQLTGDCE
EWCIEYSAAAAWCSTSAARFLRSPARTPALLRAPHLLTACLAHEILISKEAVSEIIDVIN
KTLADPDSPELELRSRMGAQLATTLPQDYHDQNFSRLLVNLFHLNVLVPLGDGRLSADTW
HEVRSSWQDGIGALVPAARKIIYKEINDYIIDTLFTEIRPLEAGRVESITSLCPLVLSKD
ASPPELRDVTEFSRALLGGAGGAARTCAVRHDCIQGNFNCPFRDDPHMKTIIDEADGEAT
EPDESDLTVYVNKCVFRSLYLKAILLRETEDESGDAQRWGSLLLRDDYFLLEFCQLLHDH
MVLCTLDEAYAFSPLHEIVGAARRTTDAVVLSTVRGTERPARRRVLAGLAQRAAACGYYW
AKARRYFELNVDPDDLEAENPFDTSNLDLEKMAEIVTGNGYFHSLQASLRGREGAAGEGA
EVAGEGAGAEGAGAAGEGAEGWARVLYLVMVRSVYAAHGDEPGVLDARFLQELARCDSGC
RLDVIIDLYYRHNHVMLYDRDIRSASWAHVLSNAAVCECLRAQLVGRGRAASAAVWDFLC
ITLCSLLSSLQLSKAHWGSTKYALLARAVLRLYVAAARAVDAAGGVVGDRAGGVVGDTAG
GVTGDEVAEAGAGAARAAEWRDVFAPDLHANLFALLTHVLDSHHAPVKSTHVSTVEELML
CTKHMDWNLLPKEQQVNTFALSRLVRACCGGLAGPHRAHQHLAACVLELLVEPLVLEDVG
KLSMWSESSDEEKEQHERPQLSLEYFHEDFVQLTDAVEAALAPYTVGEAVCGAAGMSARE
RGACLGWLLMADSLHRQCRVAKGDLKHYYIHIYKDKEYGVPLLEGSLRLLPEELLAHALG
NKPLPPQYAAHFHGTAPRSLRRPPADELARLACACVRAAVCGAGCGAARAWRSAAPQRAA
RLFDAVLAAYVTPLAVRDQLLAVHERANEIENAQIQVLWSSQEVSCVYRVEGRGVELRVQ
LARDHPVGAPRVTPPPPGSPGANTHWISVYLAYQDGTVLSALRQWTRAAGSRVQRAAVCY
ICYCRLQPAAGTLPRAACRQCKNKFHKECLRKWFSTSNKSNCPLCRASF
NT seq
5190 nt
NT seq
+upstream
nt +downstream
nt
atgggtggtaattctaaacaaagccaaagaaccaaaaataacgtccgtccatccagcagt
gggcgcagtgcagaactcctaagcaatgtcaagctggaatcaggtctagtgagcattgca
ggaggaaaagttcttccagcactgtttccaacacttacagttgctactatagaccaggaa
attagtccagaattccaaatatgcataaaaaagttgaacaaaaaggatcctattacaaag
acaaagggactacaggaaatgttggaaaccataaacaatagtaaagttgatgatgtcatc
acaattctgccaagctgggcacatttctataaaatacttgccattgacccagacaggaaa
gtgcgagagtatacacagttatgccacagcagcgtggtgcgcgcgtgcgggcggcggctg
gccccgcggctgcggcagctggtgccggcgtggctgcaggcgcggcacgacgagcacggc
ccggcgcaggcgcacgccaggacctcgctcgctagtacgttccccgatgccaagctaccg
gaagttttagcattttgtaagacagaagttatgacccatttcctcgataatctcatcggc
accggtgaagccagcatctccaaaaaagcagacagcccagaagacaaggagcagcaagtg
acccgcctcatcagcagctcgctcctcggcctggagtacttcgtccggcagctgcccgcc
cagcacgacgcctggctgtgggcccagctgtccgccctgctgcacgccgccgccttctgg
aagctggcggcgcactcctcgccgcggatacgcgcgggctgggcgggcgcggtggggcgc
ctcgtgcagcggttccactccacgttcggtgaccagttcggcgccaagacctttcgcgtc
ttgctcgaaaggacccaggacaccgagctgttggtggtggcgccgctgtggacctgtctg
ctgctctacacgcacagcgtgcaggactggtgtgaacatttggagaacaaggaattgctg
cttaaaagaatgctcgagttattagaaaacggggggcgcggcgacgccggcctgctgcgc
gccgtgctgctgccgctgctgccgcgcctgccgcgggacctgctcaccaaacacttctac
gagcaattcttcgacgccatctttgtggggttagaaaagaaaaacatattaagttcgaag
agcgagaggcagtcctggttgagcggcctggctgaggctctgcgccacctggcgcggcag
gacgacgacttcgtgctcgaggtcgtcacgtcggtgcaccgcgcgtggctgcggcgcgtg
ctggcgccgcgcagcgaccagcgcctcatgcacgaactcatcaaatgttcggccagcaat
atggctgcttgcgtcaaattttggcaccagcagtctgaagacaaatacgaccagcttata
cggaatttctggcaaaacgtgaacttcacgcttttgagtcaaatcgaaacgttgtccgat
aacacctccgacaccgccagcgcgacggccggccacgtgctgctcgtccagactctgaag
acgtcgctactaaatgaacccaaaaagcagcgaagcatcaagttcgaaatggaccgtgac
gagatcgcgccggagcccgccaccccggagtggagtcccgcgcccgacccggccgccgcg
ctccggttccggcgcgacctggacgacgccgtgcagaggctggtggcgcggtacttcgag
ctcgtgggcggcagctcgcactgcgaggcggtgctggcggcgctggcgaccctgctgcag
gagtgggagggcggcgtgcgggcggcgggcgcggccgcgctgtaccgcgcgctgctgcgg
ccgcgcctgcccgcctcccgcgccgcgctgctgctcgccttccgcctgctgccccacatg
gacgcgcccgagcgggaccgagtgttcgactccttcgaccagctgacgggtgactgcgag
gagtggtgcatcgagtacagcgccgccgccgcgtggtgcagcaccagcgccgcccgcttc
ctccgctcccccgcccgcacccccgccctgctccgcgcgccgcacctgctgacggcgtgc
ctcgcgcacgaaatactaatcagcaaagaagcagtctcggaaatcattgacgtgatcaac
aagaccctcgccgaccccgactctcccgagctggagctccgcagcaggatgggcgctcag
ctggccaccaccttgccccaggactaccacgatcagaacttttcgcggctgctcgtcaac
ctgttccatctgaacgttcttgtgccgctgggagacggcagactgtcggcggacacgtgg
cacgaagtccgttcttcctggcaagacgggatcggtgcactggttcctgctgcaaggaaa
ataatctataaagaaatcaatgactacatcatagacacgctgttcacagaaatccgaccc
ctggaggcggggcgggtcgagagcatcacctcgctgtgcccgctcgtgctgagcaaggac
gcgtcgccgccggagctgcgtgacgtcacggagttctcgcgggcgctgctggggggcgcg
gggggcgcggcccgcacgtgcgccgtgcgccacgactgcatccagggcaacttcaactgc
cccttcagggacgacccccacatgaagacgatcatcgacgaggccgacggcgaagcgacc
gagccggacgagagcgaccttacggtctatgtgaataagtgcgtttttcgctcgctgtac
ctgaaagctattttgctgcgcgagacggaggacgagagcggcgacgcgcagcgctggggc
tccctgctgctccgggacgactacttcctgctcgagttctgccagctgctgcacgaccac
atggtgctgtgcacgctggacgaggcctatgcgttctcgcccctgcacgagatagtgggc
gcggccagacgcacaacggacgccgtggtgctgtccacggtccgcggcacggagcgcccg
gcccggcgccgcgtgctggccggcctggcgcagcgggccgccgcctgcgggtactactgg
gccaaggctcggagatacttcgagctcaacgtagaccccgacgacctggaggcggagaat
cctttcgacacgtcgaacctggatctcgagaagatggcggaaatcgtaacggggaacggg
tacttccacagtctgcaggcgagcctgcgcgggcgcgagggcgcggcgggcgagggcgcg
gaggtggcgggtgagggcgcgggggcggagggcgcgggggcggcgggtgagggcgcggag
ggctgggcgcgcgtgctgtacctggtgatggtgcgcagcgtgtacgcggctcacggcgac
gagcccggggtgctggacgcgcgcttcctgcaggagctggcgcgctgcgactccggctgc
cgcctcgacgtcatcatcgacctgtactaccggcacaaccacgtcatgctctacgacagg
gatatccggtcggcgagttgggcgcacgtgctgagcaacgcggccgtgtgcgagtgtctg
cgggcacagctcgtggggcgcggccgggccgcctccgccgccgtctgggacttcctctgc
atcacgctctgctcgctgctctcctcgctgcagctctccaaggcgcactggggctccacc
aagtacgcgctgctggcgcgggccgtgttgcggctctacgtcgcggcggcgagggcggtg
gacgcggcggggggcgtggtgggggatagggcggggggcgtggtgggggacacggcggga
ggcgtaacgggggacgaagtggcggaggcgggggcgggggcggcgcgcgcggcggagtgg
cgggacgtgttcgcgccggacctgcacgccaacctcttcgcgctgctgacgcacgtgctg
gactcccaccacgcgccggtcaagtccactcacgtgtccaccgtcgaggagctgatgctc
tgcaccaaacacatggattggaacctgttgcccaaggagcagcaggtgaacacgttcgca
ctgagccggctggtgcgcgcgtgctgcggcgggctggcgggcccgcaccgcgcgcaccag
cacctggccgcctgcgtgctggagctgctcgtcgagccgctggtgctggaggacgtcggc
aagctgtccatgtggagcgagtcctccgacgaggagaaggagcagcacgagcggccgcag
ctctcgctggagtacttccacgaggacttcgtgcagctgacggacgcggtggaggccgcg
ctcgcaccatacacggtgggcgaggcggtgtgcggcgcggcgggcatgtcggcgcgggag
cgcggcgcgtgcctgggctggctgctgatggccgacagcctgcaccgacagtgccgcgtc
gctaagggggacctgaagcactactacatccacatatacaaagacaaggagtacggcgtc
cccctgctggagggcagtctgcggctgctgccggaggagctgctggcgcacgcgctgggc
aacaagccgctgccgccgcagtacgccgcgcacttccacggcacggcgccgcgctcgctg
cgccgcccgcccgccgacgagctggcgcggctggcgtgcgcgtgcgtgcgcgcggcggtg
tgcggcgcgggctgcggcgcggcgcgggcgtggcgcagtgcggccccgcagcgcgccgca
agactgttcgacgccgtgctggccgcctacgtcacgccgctcgccgtgcgggaccagctg
ctcgccgtgcacgaacgggccaacgaaatcgaaaacgcacagatccaagtgctgtggtcg
tctcaggaagtgtcgtgcgtgtaccgcgtggaggggcgcggcgtggagctgcgcgtgcag
ctggcgcgcgaccaccccgtgggcgccccccgcgtcaccccgccgccccccggctcgccc
ggcgccaacacgcactggatctccgtgtacctggcctaccaggacggcacggtgctgagc
gcgctgcggcagtggacgcgcgcggcgggctcgcgcgtgcagcgggccgccgtgtgctac
atctgctactgccgcctgcagcccgccgccggcacgctgccccgcgccgcgtgccgccag
tgcaagaacaagttccacaaggagtgtctgcgcaagtggttctcgacgagcaacaagtcc
aactgtccgctgtgcagggcgtccttctag
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