Bombyx mori (domestic silkworm): 101739617
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Entry
101739617 CDS
T02817
Name
(RefSeq) exosome complex component CSL4
KO
K07573
exosome complex component CSL4
Organism
bmor
Bombyx mori (domestic silkworm)
Pathway
bmor03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bmor00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
101739617
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bmor03019
]
101739617
Messenger RNA biogenesis [BR:
bmor03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
101739617
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Core exosome
101739617
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
EXOSC1
ECR1_N
Ntox10
Reovirus_L2_MT2
Motif
Other DBs
NCBI-GeneID:
101739617
NCBI-ProteinID:
XP_004933048
UniProt:
A0A8R1WPI5
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Position
26:3514103..3515866
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AA seq
221 aa
AA seq
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MNLEEKIKEIGSICIPGMRLSLSNKDNVSGPGTYELKGYIYAALAGILKTEEDENTKANI
ISVESSRTPSVLPNTGDIVTAKVTVVNPRTVQCLILCVGPSVLVRMYKGILKKEDIKATE
KDRVDPYKCFRPGDIILARVLPMTEIHWYQLSTAENELGVVIATAEGSPQGVSMVPISWS
EMQCPKTLVKEPRKVARVIPENINQSLFPVHSKQDNHHTDK
NT seq
666 nt
NT seq
+upstream
nt +downstream
nt
atgaatttggaagaaaaaataaaagaaataggttcaatatgtattcctggaatgcgactg
agtttatcaaacaaagacaacgtatcagggccgggaacctatgaattgaaaggatatatt
tatgcggctttagctggaatcttgaaaacagaagaggatgaaaacaccaaagctaatata
atttcagtagaaagttcaagaacaccaagtgttttacccaacacaggtgacatagtaacc
gcaaaagtaacagttgtaaatccaagaactgtacaatgcctaatcctctgtgttggccct
tcagtacttgttagaatgtacaaaggaatattaaaaaaagaagatataaaggcaacagag
aaagacagagttgatccatataaatgttttagacctggagatattatactagctagagtt
ttaccaatgacggaaatccactggtaccaattatcgactgcagaaaatgaactgggagtt
gttatcgctacagctgaaggatcaccgcaaggggtcagcatggtaccaataagctggtca
gagatgcagtgccctaaaactctagtcaaagaaccaaggaaagttgctagagttataccg
gaaaatattaatcaatcactctttccagttcattcaaagcaagacaatcatcacactgat
aaataa
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