Bombyx mori (domestic silkworm): 101739698
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Entry
101739698 CDS
T02817
Name
(RefSeq) putative leucine-rich repeat-containing protein DDB_G0290503 isoform X1
KO
K12617
DNA topoisomerase 2-associated protein PAT1
Organism
bmor
Bombyx mori (domestic silkworm)
Pathway
bmor03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bmor00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
101739698
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bmor03019
]
101739698
Messenger RNA biogenesis [BR:
bmor03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
101739698
mRNA degradation factors
5'-3' decay
Decapping complex
101739698
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DUF1664
Motif
Other DBs
NCBI-GeneID:
101739698
NCBI-ProteinID:
XP_004930764
UniProt:
A0A8R1WN01
LinkDB
All DBs
Position
23
Genome browser
AA seq
1033 aa
AA seq
DB search
MADSFFGFDTSLSNLNDDEGCAEPSEDEYDALNDETFGHGSDEYDWEVEHEHLAGQLESS
RRQNSGIDEIANSQLELSLSQLVLDDTDAPQSGSLGSSVWRNDAPFPGPQAPAPLKNVCT
VEELERQLRHAQSQPMQQHSSQQPYNSQNYYQPRFPVILQRPPGLQAPVLVPFVSQQHNM
NQPMNTMLSQNNQIPQNNQMMSNQMGQNQFMQNNQIGQFQNSQMGTNLGPNVHQMRQNMK
MNQMGPKKPMPQNLNQMSQNVNQMPKNMTQMGQNIAQPHPQINQNIPQMNPNINQMNLSQ
MPHNYNHMNQNSSQMGPSMNQIGPNTNHMGPGIGQISQPINKLGSNVNQMTPNMNQNSNH
INQMIPNLNKMPPNSQLAQNSNQLSSNTKPMGQNVNQMMNGNQFGQMNQFPHMMGQPRMM
GPPPGINMPRQNYNQQNVGQFNSNIRGPTLKNESQQVPTQQYNQIANKMSQPAKSVSPQR
LKKTETKQKTRIYNNTNLSSQNLVQIIQNTHPILQYNSGFHNASHHPMLGRGPLNNQLNH
PLLNQRQNGTYSNRESSQDEEVANEDEYAGLMSQREKQWLLNIQMLQLNTGTPYIHDYYY
TVFLERQANKEKEGVKEAHKANQQNHPFYSGTVKQDGHQHRERHNSNRHNSTGEEAGAPR
AYVPTQFENSLGKLQCGSVTAPRKLIDVEVVGGEVAPSRMSRASSVASTANPAEAPREMK
RTKQLLLDIEALYLILLRLEELNDPLAISNALILKEREEKQKLLDVAQKELNKEDDDDSN
LFLKNIESVQRRPKQESPKNESIDKRQVVNLAVAQKPAPVNLLDENKDDLISKMFAGLLH
ADRVAQMMNVRKGRMLISRFVRRVGPSHPRLRTLWGRLLRALTVARRHDPTVDLATPYAE
YIQSTTGWSAVLESCSVLSEALDPARTPHALSSSFTLSAICALVLKASTLVSTGEPSAGE
RQWAKFLRTAARALRAAPPGPRPLRPLPEPRLRRHLRQLEARGPVEILQRGQAPNLVDMT
KQEMHELLVKHLC
NT seq
3102 nt
NT seq
+upstream
nt +downstream
nt
atggcagattcattctttgggttcgatacttcattatcgaacttaaatgacgacgaaggt
tgcgcagaaccctcagaggacgaatacgatgcattgaacgatgagacattcggccatgga
tccgacgaatatgactgggaggtggaacatgagcacctcgccggacagctcgagagcagt
cgacgccagaacagcggcatcgacgagattgccaactcacagctcgagctgtcactgtcg
cagttagttttggacgatacggacgcgccgcagtccgggtcgctcggctccagcgtttgg
agaaacgatgcgcccttcccaggaccgcaggccccggcgccgctcaagaacgtatgcacg
gtcgaagagttggagcggcagctgcgtcacgcgcagtcgcaacccatgcaacagcactcc
tcgcagcagccgtacaactcgcagaactactaccagccaaggtttccggtgatactacaa
agacctccaggcttacaagcgcccgtattagtaccgttcgtatcccagcagcacaacatg
aaccaaccaatgaacacaatgctcagtcagaacaatcaaattccgcaaaacaatcaaatg
atgagcaatcaaatgggccaaaaccagtttatgcaaaacaaccagattggacagtttcag
aacagtcaaatgggaacgaatttagggcctaatgtacaccagatgaggcaaaacatgaaa
atgaatcaaatgggtccaaagaaacctatgccacagaacttaaatcagatgagccaaaac
gttaatcaaatgcccaaaaatatgacacaaatgggacagaatatcgcccaaccacatcct
caaattaaccagaacatcccgcaaatgaatccgaacataaatcaaatgaacctgtctcag
atgccgcataattacaatcacatgaaccaaaattctagccaaatgggtccaagtatgaat
cagattggcccaaacacaaaccatatgggaccaggtataggccaaatatcccaaccgatt
aacaaactaggttcaaacgttaaccaaatgacgcccaacatgaatcaaaactcaaatcat
ataaatcaaatgattcccaatttgaacaaaatgcctcccaattctcagttggctcaaaat
tcaaaccaattaagctctaacacaaaaccgatgggtcaaaacgtgaatcaaatgatgaac
ggtaaccagtttggccaaatgaatcagttcccgcatatgatgggccaacctcgcatgatg
gggcctccacccggtatcaatatgcccaggcaaaactacaaccagcagaacgttggacag
tttaattccaacattcgagggccgacactgaagaatgaatcgcagcaagtgcccactcaa
caatacaatcagatcgcgaacaaaatgagccagccagccaaatcagtatccccgcagagg
ctaaagaaaaccgaaacgaaacaaaagacaagaatctacaacaacacaaatttatcctcg
cagaatttagttcaaataatacagaacactcatccgatactgcagtacaacagcgggttc
cataatgcatcgcaccatcccatgctgggtcgtggtcctctgaacaatcagctcaaccat
ccactcttgaatcagaggcagaacggaacctacagtaacagagagtcctcgcaagacgag
gaggtcgccaacgaagacgagtacgctggtctcatgtcgcagagagagaagcagtggcta
ctgaacatacagatgctgcaactgaacacggggactccgtacatacacgattattattat
accgtcttcttagaaaggcaggcaaataaagagaaggaaggcgtgaaggaagctcacaag
gccaaccaacagaatcatcccttctacagcggcacagtgaagcaagacggtcaccagcac
agagagcggcacaactccaaccgacacaactcgacgggcgaggaggccggggctccgcgg
gcctacgtgccgacgcagttcgagaactcgctcgggaagctgcagtgtggcagcgttact
gccccaaggaagttgatagacgtggaagtggtcggtggagaggtggcaccctccaggatg
tccagagcttccagtgtggcgagcacagccaatcctgctgaagcgcctagagagatgaaa
aggacgaaacaattgctcctagatatagaagcgctgtatctgatcctgttgagattagaa
gagctaaacgacccgctggcgatatccaatgcgttaatactgaaggaaagagaagagaaa
caaaaactattagacgtagctcagaaagaactgaacaaagaggatgacgacgattctaat
ctgttcttgaagaatatagagtcggtgcagaggaggcccaaacaggagagccccaagaac
gagagcatcgataagagacaggtcgtcaacctggcggtagcccagaagccggcaccggtg
aaccttctggacgagaacaaggatgacctgatcagcaagatgttcgcgggcctgctgcac
gccgaccgtgtggcgcaaatgatgaacgtcaggaagggaaggatgctaatatctcgcttc
gtgaggcgagtgggtccgagtcacccgcgcctgcgcacgctgtggggccgcctgctgagg
gcgctcaccgtcgcccgacgtcacgacccgaccgtcgatctagcgaccccgtacgcagaa
tacatccagagcacgacgggctggtcggccgtgctggagtcgtgcagcgttctgtccgaa
gcgttggatcccgctcgcacgccccacgctctgtcgtcatctttcacgctctcggccatc
tgcgctctagtactgaaagcgtctaccctggtgagcacgggtgagccctccgccggtgag
cgccagtgggccaagttcctgcgcacggcggcccgcgccctccgcgccgcaccgcctggc
ccccgccccttgcgccccctgcccgagccccgcctgcgccgccacctccgccagctcgag
gcgcgcggccccgtcgagatcctgcagcgaggtcaggcgcccaacctcgtcgacatgacg
aagcaagagatgcacgagctgctcgtgaagcacctgtgctga
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