Bombyx mori (domestic silkworm): 101739903
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Entry
101739903 CDS
T02817
Name
(RefSeq) ATP-dependent RNA helicase DHX8
KO
K12818
ATP-dependent RNA helicase DHX8/PRP22 [EC:
5.6.2.6
]
Organism
bmor
Bombyx mori (domestic silkworm)
Pathway
bmor03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
bmor00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
101739903
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
bmor03041
]
101739903
Enzymes [BR:
bmor01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
101739903
Spliceosome [BR:
bmor03041
]
Complex C
Other components
Step II factors
101739903
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
S1
Helicase_C
WHD_HA2
DEAD
AAA_22
GIPC1_GH2
AAA_19
Flavi_DEAD
nSTAND_NTPase5
nSTAND3
AAA_30
Sigma54_activ_2
Motif
Other DBs
NCBI-GeneID:
101739903
NCBI-ProteinID:
XP_004921601
UniProt:
A0A8R1WDY0
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Position
10:complement(15839373..15850574)
Genome browser
AA seq
1314 aa
AA seq
DB search
MDEVTKLEHLSLVSKICTELDNHLGLNDKDLAEFIIDLADKNPTFETFKVALVENGAEFS
DSFMTNLLRIIQHMKPVNTSTLIKNIAETESENPLAKKFPGLAIPNDKPQSFSDESSDDE
KDKKRITAKDLFTEEIKPSSTDNVVDLAMAELEALAPSNSTTNELLIGKEPLKIESSRNS
DHKEKNKSEESRDKESRSRNPKRSRSRERKRSRSTQNTDKYKLEESRDRKRHSRSRDRKR
SRSRDRKRSRSRDRRRSRSRDYKRSRSRERKRSRSKGKRSRSRDRRSKSQDRDRRRRSHS
RHRHRSRSRDRRRSYSKSRRSVSGGRRSRSRNREEKFDYGKKSRKRSPEVELNDDPEPGK
IYSGRVANIVPFGCFVQIEGVRKRWEGLVHISQLRAEGRVTNVSDVVNRGDKVKVKVISI
TGQKVSLTMKDVCQETGKDLNPASHAHLEAEREGRNPDRPPPAATVLAGLQGGIDPDEDS
SRKRVTRISSPERWEIKQMISSGVIDKSELPDFDEETGLLPKDEDGEADIEIELVEEEPP
FLQGHGRALHDLSPVRIVKNPDGSLAQAAMMQSALAKERREQKMIQREQEMDSVPTGLNK
NWIDPLPESEGRTLAANMRGAGVVPQDLPEWKKHVIGGKKSSFGKKTNLSLLEQRQSLPI
YKLRDELTKAVSDNQILIVIGETGSGKTTQITQYVCECGLAARGKVACTQPRRVAAMSVA
KRVAEEFGCRLGQEVGYTIRFEDCTSPDTVIKYMTDGMLLRECLMDLDLKAYSVIMLDEA
HERTIHTDVLFGLLKQAVQKRPELKLIVTSATLDAVKFSQYFFEAPIFTIPGRTFPVEVL
YTKEPETDYLDASLITVMQIHLREPPGDILLFLTGQEEIDTACEILYERMKSLGPDVPEL
IILPVYSALPSEMQTRIFEPAPPGSRKVVIATNIAETSLTIDGIYYVVDPGFVKQKVYNS
KTGMDSLVVTPISQAAAKQRAGRAGRTGPGKCYRLYTERAYRDEMLPTPVPEIQRTNLAT
TVLQLKTMGINDLLHFDFMDAPPVESLIMALEQLHSLSALDSEGLLTRLGRRMAEFPLEP
NLSKILIMSVALQCSDEILTIVSMLSVQNVFYRPKDKQALADQKKAKFNQPEGDHLTLLA
VYNSWRNNKFSNAWCYENFVQIRTLKRAQDVRKQLLGIMDRHKLDVVSAGKNTVRIQKTI
CSGFFRNAAKKDPQEGYRTLVDSQVVYIHPSSALFNRQPEWVIYHELVQTTKEYMREVTT
IDPKWLVEFAPAFFKFSDPTKLSKFKKNQRLEPLYNKYEEPNAWRISRVRRRRN
NT seq
3945 nt
NT seq
+upstream
nt +downstream
nt
atggacgaagtcactaaattagagcatctttcgctcgtgtctaaaatatgcaccgagcta
gacaaccatttaggtttgaacgacaaggatttagcggaattcatcatagatttggctgat
aagaatccaacatttgaaacttttaaagtagcattggttgaaaatggggctgaattttct
gattccttcatgacaaatctactccgtataatacagcacatgaaacctgtgaatacatca
acattgattaaaaatattgccgaaactgaaagtgaaaatcctttggcaaaaaagtttcct
ggcttggccataccaaatgataaacctcaatctttttctgatgaaagtagtgatgatgaa
aaagacaaaaagagaataacagccaaagacttatttacagaagaaattaaaccaagttct
actgataatgttgttgatttggcgatggctgaattggaagctttagcaccttccaattct
acaacaaatgaacttcttataggaaaagaacccctaaaaattgagagtagtagaaatagt
gatcacaaagaaaagaataaatcagaagaatctagagataaagagagtaggagtcgaaat
cctaaaagaagcagaagtagggaacgtaaaagaagcagaagtacacagaacacagataaa
tataaactagaagaatctcgagatagaaaaaggcatagtagaagtcgagatcgtaaaaga
agtaggagccgagatagaaaaagaagtaggagccgagatcgtagaagaagtaggagtaga
gattataaaagaagtagaagtagggaacgtaaaagaagtagaagtaaaggtaagagaagt
cgtagccgggataggagaagcaaaagtcaagacagagaccgtagaagaagatcacacagt
cgacatcgtcacagatccaggtctagggacaggcgtagatcttactcgaaaagtagaaga
tcagtatcaggtggcagaagatctcgttcaagaaatagagaagaaaaatttgattatggc
aagaaaagcagaaaacgcagccctgaagtagaattgaacgatgatcctgaaccaggaaaa
atatacagtggccgcgttgcaaacattgtaccattcggctgttttgttcaaattgaagga
gtcagaaaaaggtgggaaggattggtgcatatctcacagctgcgagctgagggtcgtgtc
accaatgtatctgatgttgtcaatagaggtgataaagttaaggtcaaagtaatctcaata
acaggacagaaagtttctctcacaatgaaggatgtttgtcaagagaccgggaaggatctc
aatccagcatcccatgctcacctggaagcagaacgtgaaggccgaaaccctgatcgccct
ccaccagcagcaactgtgttagccggactccaaggtggaatagaccctgatgaggattct
agtaggaagagggtgacaaggatatccagtcctgagagatgggagatcaaacagatgatt
tcatcaggcgtaattgataagagtgaattaccagattttgatgaggagactggtttactt
ccaaaagatgaagatggcgaggcagacattgaaatagagctagtagaagaagaacctcct
ttcctccaaggtcatggcagagcccttcacgatctttctccagtaaggatagttaagaat
cccgatggctcccttgcacaagcagccatgatgcagtccgcattggccaaagagaggaga
gagcagaagatgatccaacgggagcaggaaatggacagcgtacctactggtctaaataaa
aattggatagatccgctacctgagtccgagggtcgaacgttagcggccaacatgcgaggc
gcgggcgtggtccctcaagacttgccagaatggaagaaacacgtcatcggtggaaaaaaa
tcctcatttggaaagaaaacgaatttatccctgctcgagcagagacagtcgctgcccata
tacaagcttagagatgaactaactaaggccgtgtccgacaaccagatcctgatcgtgatc
ggcgagacggggtcgggcaagacgacgcagataacgcagtacgtgtgcgagtgcgggctg
gcggcgcgcggcaaggtggcgtgcacgcagccgcgccgcgtggccgccatgtccgtcgcc
aagcgcgttgccgaggagttcggctgccggctgggccaggaggtgggctacaccatacgc
ttcgaggactgcaccagcccggacactgtcatcaaatacatgacggacggcatgctgctc
cgcgagtgcctcatggacctggacctgaaggcgtactcggtgatcatgctggacgaggcg
cacgagcgcaccatccacaccgacgtgctgttcggtctgctgaagcaggccgtgcagaag
cgccccgaactcaagctcatcgtcacgtccgccacgctcgacgccgtcaagttctcgcag
tacttcttcgaggccccgatcttcaccatccccggtcgaaccttccccgtcgaagtcttg
tacaccaaggaaccggagacggactatttggacgcctcactgatcacggtcatgcagatc
cacctgagggagcccccgggggatatcctgctgttcctcactggccaagaagagattgac
acggcgtgtgagatattgtacgagagaatgaagtccttggggccggacgtgccggagctg
ataattctgccggtgtactctgcgctgccgtccgagatgcagacccggatcttcgagccg
gcgccccccggctccaggaaggtggtgatcgccaccaacatcgcggagacgtcgctgacc
atcgacggtatatactacgtggtggaccctggcttcgttaaacagaaagtctacaactcg
aagactggaatggattcgttggttgtaactcctatatcgcaggcggcggcgaagcagcgc
gccgggcgggcgggccgcaccgggccgggcaagtgctaccggctgtacacggagcgagcc
taccgggacgagatgctgcccacgcccgtgcccgagatacagcggaccaacctcgccacc
accgtattacaattgaaaacaatgggtataaacgatttgctgcatttcgacttcatggac
gcgccgccggtcgagtcgctcatcatggcgctggagcagctgcactcgctgtcggcgctc
gactctgagggactcctgacgaggctgggacgcagaatggccgaatttccactagagcca
aacctatcgaagatcctaatcatgtcggtggccctgcagtgctcggatgaaatactcaca
atagtgtcgatgctgagcgtccaaaacgttttctatcggccgaaggacaagcaggcgctt
gccgaccagaagaaggccaagttcaaccagccggaaggggaccacctgacgctactggcc
gtgtacaacagctggaggaataacaagttctcgaacgcgtggtgctacgaaaacttcgtg
cagatcaggacgttgaagcgggcccaggacgtgaggaagcagctcctcgggatcatggac
agacacaaattagacgtagtttcagccggtaagaatacagttcgcattcagaagacgata
tgctcgggcttcttcaggaacgcggccaagaaggatccccaggaaggatataggacgctc
gtggacagtcaagttgtttatatacatccttccagtgcactgttcaacagacaaccggaa
tgggtaatctaccatgagctagtacagactacgaaagagtacatgagggaagtcacgacc
atagacccgaaatggctggttgagtttgctcccgccttctttaaattctcggacccaaca
aaactctctaaatttaagaagaaccagagactggaaccgttgtacaataaatatgaggag
ccgaacgcttggaggatatcgagagtcagacgcagaagaaattag
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integrated database retrieval system
