Bombyx mori (domestic silkworm): 101741570
Help
Entry
101741570 CDS
T02817
Name
(RefSeq) protein suppressor of forked isoform X1
KO
K14408
cleavage stimulation factor subunit 3
Organism
bmor
Bombyx mori (domestic silkworm)
Pathway
bmor03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
bmor00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
101741570
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bmor03019
]
101741570
Messenger RNA biogenesis [BR:
bmor03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage stimulation factor (CSTF) complex
101741570
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Suf
HAT_PRP39_N
HAT_PRP39_C
HAT_Syf1_CNRKL1_N
PRP6_TPR
NRDE-2
Motif
Other DBs
NCBI-GeneID:
101741570
NCBI-ProteinID:
XP_004925975
UniProt:
A0A8R2AQA7
LinkDB
All DBs
Position
23:20031488..20052817
Genome browser
AA seq
727 aa
AA seq
DB search
MASVDEIADIDWGNERLSRAQRAVEANIYDVDSWSLLVREAQARNINDVRTMYEKLITAF
PTTGRYWKIYIEQEMKARNFERVEKLFQRCLMKILNIELWRLYLNYVKETKCMLPTYKEK
MAQAYDFALDKIGLDIHAYPIWNDYVTFLKSVEAVGSYAENQKISAVRKIYQRAVITPII
GIETLWKDYIAFEQSINPIIAERMAMERSREYMNARRVSKELETVTRGLNRNMPATPPTV
DREEMKQVELWKKYISWERANPLRSEDTALVARRVMFAIEQCLLCLAHHPDVWHQAAQFL
DHSSKLLQEKGDSNASRLFSDEAAAVYERATSGPLKHSTLLHFAHADYEESRLHYHKVHQ
VYTRYLDTEDIDPTLAYVQYMKFARRAEGIKSARTVFKRAREDQRSRYHVFVAAALMEYY
CSKDKNIAFRIFELGLKKFSHIPEYVLCYIDYLSHLNEDNNTRVLFERVLSSGSLRPEHS
VDIWNRFLEFESNIGDLVSIVKVEKRRQGVLEKIKEFEGKETAQLVDRYKFLDLYPCSIA
ELKSIGYTEVASMSNKSWALGGPLAGISPELAAVILGQRDNDPNKDIARPDTNQMIPYKP
KSNPLPGEHPIPGGAFPLPSSAAHVCTLLPPPNCFRGPFVAVDRLMQLFNRISLPDKVPA
PSAENGCDTRLFEMARSVHWLFDDDGVTAISNKVRRRKLGDDSDDDELGTAPPVNDIYRQ
RQQKRVK
NT seq
2184 nt
NT seq
+upstream
nt +downstream
nt
atggcatctgtagatgaaatcgccgacattgattggggtaatgaacgcctatcccgcgcc
cagcgtgcagtcgaagccaacatatacgatgtggactcttggtcattgctagtaagagaa
gcccaggcccgaaacatcaacgatgtccgaaccatgtacgagaagttgataacggcattc
ccgaccacaggacgttactggaaaatatatatcgaacaggagatgaaagcgagaaatttt
gaaagagtcgaaaagctcttccagaggtgtctgatgaagatattaaacatcgaactctgg
aggctgtacctgaactacgtgaaggagacgaagtgcatgctacccacttacaaggagaaa
atggcgcaggcctacgacttcgccctggacaagataggtctggacatccacgcttaccca
atatggaacgactacgtgacgtttctgaagagtgtcgaagccgttggttcatacgccgag
aaccagaagatatccgccgttcgaaagatctatcagagagcggtcataacgcccataata
ggcatagagacgctgtggaaagactatatagccttcgagcaaagcatcaacccgataatc
gccgaaaggatggccatggagcgttcccgggagtacatgaacgcgagacgagtctccaag
gagctggagacggtcacccggggactcaataggaacatgcccgcgacgccgcccaccgtc
gaccgcgaggagatgaaacaggtggagttatggaagaagtacatatcgtgggagcgcgcg
aaccccctccgctccgaggacacggcgctggtggcgcggcgcgtgatgttcgccatcgag
cagtgcctgctgtgtctggcgcaccacccggacgtgtggcaccaggccgcgcagttcctc
gaccactcctccaagctgctgcaggagaagggggactcgaacgcgtcccggctgttctct
gacgaggcggcggcggtgtacgagcgcgccaccagcggccccctcaaacactccacgctg
ctgcacttcgcacacgcagactacgaggagagcaggctgcactaccacaaggtgcaccag
gtctacacgcgctacctggacacagaggacatcgaccccacgttggcctatgtacagtac
atgaagttcgccaggagggcggagggaatcaagtctgcgaggaccgtcttcaagagggcc
cgggaggatcagaggtcccggtaccacgtgttcgtggccgccgcgctcatggagtactac
tgctccaaggacaagaacatagccttcaggatcttcgagctcggcctcaagaagttctcc
cacatcccggagtacgtgctctgctacatcgactacctgtcccatctcaacgaggataac
aacacgagggttctgttcgagcgggtgctgtcctcgggcagcctgaggccggagcactca
gtcgacatatggaacagattcctggagttcgagtccaacatcggggacctggtcagcatt
gtcaaagtcgagaagcggcggcagggcgtgctcgagaagataaaagaattcgaaggcaaa
gagacggcccagctggtggacagatacaagttcctcgacctgtacccgtgcagcatcgcc
gagctgaagtctatagggtacactgaggtggcctccatgtcgaacaagtcgtgggccctc
ggggggccgctggcggggatctcgccggagctggcggccgtcatcctggggcagagagac
aacgatcctaacaaagacattgcgcgtccggacaccaaccaaatgattccgtacaaacct
aagtcgaacccactacccggggagcaccccataccaggtggggcgtttccgctgccgtcg
agcgcggcgcacgtgtgcacgctgctgccgccgcccaactgcttccggggacccttcgtg
gcggtggaccggctcatgcagctcttcaacaggatatcgctcccggataaagtgccggcg
ccctccgcggagaacggctgcgacacgcggctgttcgagatggcgcgctccgtgcactgg
ctgttcgacgacgacggcgtcaccgccatctccaataaggtccggcgcaggaagctgggc
gacgactctgacgacgacgagctgggcacggcgcccccggtcaacgacatatacaggcag
cggcagcagaagcgcgtcaagtag
DBGET
integrated database retrieval system
