Bombyx mori (domestic silkworm): 101741574
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Entry
101741574 CDS
T02817
Name
(RefSeq) probable cleavage and polyadenylation specificity factor subunit 2
KO
K14402
cleavage and polyadenylation specificity factor subunit 2
Organism
bmor
Bombyx mori (domestic silkworm)
Pathway
bmor03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
bmor00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
101741574
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bmor03019
]
101741574
Messenger RNA biogenesis [BR:
bmor03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
101741574
U7-dependent histone pre-mRNA processing factors
101741574
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lactamase_B_6
CPSF100_C
Beta-Casp
Lactamase_B_2
Lactamase_B
RMMBL
Anti-Pycsar_Apyc1
Motif
Other DBs
NCBI-GeneID:
101741574
NCBI-ProteinID:
XP_037876257
UniProt:
A0A8R2M7Y2
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Position
25:complement(11893612..11909890)
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AA seq
727 aa
AA seq
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MTSIIKLHCLSGAGEETPPCYVLQIDEFKFLLDCGWDEKFDMVFIKELKRHVNSIDAVLI
SHSDPLHLGALPYAVGKLGLSCPIYATLPVYKMGQMFMYDLYQAHKNVSEFDLFTLDDVD
MAFDRIVQLKYNQSIEMKGKGLGLRITPLPAGHSLGGTIWRISAPGEEDIVYAPDFNHKK
ERHLNGCDIERLMRPSLMLLGAMNADYVQQRRRLRDEKLMTTILTTLRGGGCVLVCTDTA
GRVLELAHMLDQLWRNKDSGLVAYSLLLLSNVSYNVVEFAKSQIEWMSDKLTRAFEGARS
NPFALRHVQLCHSAGDVTRTPGPKVVLASFPDLEAGFARDLFLQWAPHSHNSIVLTARTS
PGTLARDLIDNGGDRVIELVVRRRVKLEGAELEEFLQQQRMNVTNTVREEVAGISSDSDS
EDELEMCVVTGRHDIPVRLETRLGGCFKSNKRHHAIYPFHEERTRADDYGEIIKPEDYRL
AEIVDAEGEIRDVPPTAPIKQEQDEEMSEVPSKCVSSVRQVHVKAHVEYIELEGRCDGES
LLRVVSQTKPWAVVGLRASEAALHTLKKHCESEGIEKVFLPSVGETVDATTESHIYQVKL
TDGLMRGLVWRQAGDAELAWLSAVVAPRTHARESDAAPEEGGGAVSLEAGAGRPRAAAFV
NTVRLHELRAALARAGLQPDLGAGTLTCCSGTLAVRRMENGQVSLEGVLSEEYYKVRELL
YEQFAIV
NT seq
2184 nt
NT seq
+upstream
nt +downstream
nt
atgacttcaataattaaattacattgcttatctggtgctggtgaggaaactcctccgtgc
tatgtgctccaaatagatgaattcaaattcctcctggattgcggatgggacgagaaattc
gatatggttttcattaaagaacttaaaagacatgtaaattcaatagatgctgtactaata
tcacactcggatcctctacatttaggagctcttccatatgcagttggaaaactcggtctt
agctgtccaatatatgcaactctaccggtatacaaaatggggcagatgttcatgtacgat
ttataccaagcccataagaatgtgtccgagttcgatttgttcacactggatgatgttgat
atggcttttgacagaatcgtacagttgaaatacaatcagagcattgaaatgaaaggaaaa
ggtctaggtctccgcattacaccactcccagctggccattcccttggtggaacaatatgg
cgcatatccgcccccggcgaggaagatattgtttacgcgcctgacttcaaccacaagaaa
gagagacatctgaatggatgtgacatcgaaagactgatgagaccctctctgatgctgttg
ggagctatgaatgctgattacgtgcaacagaggagaagactgagagatgaaaaattgatg
acaacaattcttacaacgctgcgaggaggcggttgcgttttggtatgcacagacacagcc
ggtcgagtcctagaattggcccacatgctggaccaactgtggaggaacaaggattccggg
ctcgtggcctattcgttacttctcctgtccaacgtcagttacaatgtcgtagagttcgct
aaatctcagatagagtggatgagcgacaaactgacgagggcgtttgaaggggctcgcagt
aatccctttgctttgagacacgtgcagctgtgtcactcggccggtgacgtcactaggacc
ccgggaccgaaggtcgtcctggcctcgttcccggacctggaggcgggcttcgccagagac
ctgttcctccagtgggccccacactcccacaactcgatcgtgctgacggccagaacatcc
cccggcacactggcaagagatctgatagacaacgggggggaccgcgtcatcgagctggtg
gttcgacggagggtgaagctggagggcgccgagctcgaggagttcctgcagcagcagaga
atgaacgtcaccaataccgtgagggaggaggtggccggcatctcgtcggactctgactcc
gaagacgagctggagatgtgcgtggtgaccgggagacacgacatccccgtgcgcctggag
accaggctgggcggctgcttcaagtccaacaagcggcaccacgccatctaccccttccac
gaggagcggaccagggctgatgactacggagagatcattaagccagaagattacagactt
gccgagatagtggacgccgaaggggagatccgggacgtgccccccactgcccccatcaaa
caggaacaagatgaggaaatgtcggaggtcccgagcaagtgcgtgtcctcggtgcggcag
gtacacgtcaaggcgcacgtcgagtacatcgagctggaagggcgctgcgatggggagtcc
ctgctcagggtcgtgtcgcagaccaagccctgggcagtggtggggctccgggccagcgag
gcggcgctgcacaccctcaaaaaacattgtgagtctgaaggaatcgaaaaggtgttctta
ccgtccgttggggaaaccgtcgacgccacgacagagtcacacatctatcaggtgaaactg
acggacgggctgatgcggggcctggtgtggcggcaggccggggacgccgagctggcctgg
ctgtccgccgtcgtggcgccgcgcacgcacgcccgggagagcgacgccgcccccgaggag
ggcggcggtgcggtgtcgctggaggcgggtgcggggcggccgcgcgcggctgcgttcgtg
aacacggtgcggctgcacgagctgcgcgccgccctcgcccgcgccggcctgcagcccgac
ctcggcgccggcacgctcacctgctgctccgggacgctcgccgtgcgcaggatggaaaac
ggccaagtttctttagaaggagtcctgtctgaagagtattacaaagtgcgagaactcttg
tacgaacaattcgcgatagtctga
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