Bombyx mori (domestic silkworm): 101741658
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Entry
101741658 CDS
T02817
Name
(RefSeq) histone deacetylase 6 isoform X1
KO
K11407
histone deacetylase 6 [EC:
3.5.1.98
]
Organism
bmor
Bombyx mori (domestic silkworm)
Brite
KEGG Orthology (KO) [BR:
bmor00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
bmor01009
]
101741658
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bmor03019
]
101741658
04131 Membrane trafficking [BR:
bmor04131
]
101741658
03036 Chromosome and associated proteins [BR:
bmor03036
]
101741658
Enzymes [BR:
bmor01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
101741658
Protein phosphatases and associated proteins [BR:
bmor01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
101741658
Messenger RNA biogenesis [BR:
bmor03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
101741658
Membrane trafficking [BR:
bmor04131
]
Autophagy
Aggrephagy
Other aggrephagy associated proteins
101741658
Chromosome and associated proteins [BR:
bmor03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class II HDACs
101741658
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hist_deacetyl
zf-UBP
zf-UBP_var
Motif
Other DBs
NCBI-GeneID:
101741658
NCBI-ProteinID:
XP_012543899
UniProt:
A0A8R2G7E0
LinkDB
All DBs
Position
5:17636707..17661454
Genome browser
AA seq
1081 aa
AA seq
DB search
MATPPPTQSRRSGGDSKKVTPPTSNIVTRNGARKAKIQTRAMSAAAKPSASLIAAKKKAQ
QKKKQNHFVMEIRDHFQIAMESKTLVKGPTGFVTEPRMGEHRCLWDENYPECPERLISVI
KRCQELNLVQRCKHLEPRAATKEELCVLHAPSVYEMLETTHGNDDAAYLEELSSKFDAIY
IHPSTHELALISAGSTIDMVDSIVSGEVQNGAAFVRPPGHHAMHSEPCGYCFYNNVALAA
KHALDKRGLQRILIVDWDVHHGQATQQMFYDDPRVVYFSIHRYEHGSFWPQLRQSDFHYV
GSGAGKGYNFNVPLNKTGMKDGDYLAIWHQLLLPMAYEYQPELIIVSAGYDAAIGCPEGE
MEVSPACYAVLLHALQSVTSRVCVVLEGGYCLTSLAEGAALTLRTLLGDAPPKLEPPTPP
CDSIRDTILDCIYAHRQYWSCYSYQPARGDRHEVLVRWRGDETRPSRFATRDCYPTQDEP
TRRALEDRLDHLRAVTDLTSPTHAVGYVYDEAMLKHRNVVEPGHVESPERIMRIHERHRD
FGLLERLHRLPGRAASDQEILSVHSDKYLDRLKELASTKLRDLNNQKEEYDSVYFHPESL
SSAAVAAGCVLQAVEAVVSGQCGAAACVVRPPGHHAARAAPAGFCLLNNAALAARAAHRV
LLLDWDVHHGNGTQALTYTDDQILYISIHRYDHGSFFPHSKDADYTAVGTGRGEGYNINI
PWNKRGMGDAEYMAAFTQVVLPIAHEYNPDLVIVSAGFDACVGDPLGGCKVTPECYGRMT
QLLRGLAGGRVVLCLEGGYNTTAISYAMTMCTKALLGDPILHHYEPRTACHWSAVETINN
VISTHKKYWKSLAFQLALPSEDVLQRPAPSRGLSDLSDALSSSYEDTKSDSKSGSQLDTS
LEHNMANLSLNKCGDGVHCGTDDEDEAGDTASNSNPESTGNTKSLVDYLSENMQALVEGE
MFAVVPLGWCPHLEALYAIPAGVRFQQGLQCVDCEHTLENWVCLHCYITACARGVNAHMQ
AHWAASGHALVLSLRDLSVWCCACDAYVDHPLLYDAKNNAHRCKFGEDMPWCYAADAVEM
H
NT seq
3246 nt
NT seq
+upstream
nt +downstream
nt
atggctacacctccgccgacgcagtctcgtagatcgggcggtgacagtaagaaagtaacg
ccgccaacgtccaatatagtgaccaggaatggagctcgcaaggccaagattcaaactcga
gcaatgtccgccgcagctaagccttcagcatccttaatagcagctaaaaagaaggctcaa
cagaaaaagaagcaaaatcatttcgtaatggagatcagggatcattttcagattgcgatg
gaatcgaagacattagtgaagggtccaaccggatttgtcaccgagcctcgcatgggagaa
cacaggtgcttgtgggacgaaaattacccagaatgtccggaaaggctcattagtgtcatc
aagaggtgtcaggaactgaacctggtccagcgctgcaagcacttggagccccgcgcggcc
accaaggaggagctctgcgtgctacacgcgccctccgtgtacgaaatgttagagacgaca
cacggaaacgacgacgccgcgtatttggaagagctctcatcgaaattcgacgctatttat
attcatccaagcacgcacgagttggcgctgatatcggccggctcgaccatcgacatggtg
gacagcatcgtgtcgggtgaagtccagaacggcgcggccttcgtgcggccgccgggacac
cacgccatgcactcggagccctgcggctactgcttctacaacaacgtcgctttggccgcc
aagcacgccttggacaaaaggggtctgcaaaggatactgatcgtggactgggacgttcac
cacggacaagccacacagcagatgttctacgacgatcccagagtggtatacttctcgata
caccgctacgagcacggctcgttctggccccagctgcgacagtccgacttccactacgtc
ggcagcggcgccggtaaaggatacaatttcaatgtgcccctcaacaaaaccgggatgaaa
gacggagactatttggccatctggcaccagctgcttctgcccatggcctacgagtaccag
ccggagttgatcatagtatctgcaggatacgacgcggccatcggatgtcccgagggagag
atggaggtgagtccggcgtgctacgcggtcctgctgcacgcgctgcagtcggtgacgtcg
cgcgtgtgcgtggtgctggagggcggctactgcctgacgtcgctggccgagggggccgcc
ctcacgctgcggacgctgctgggcgacgcgccccccaaactggagccccccacgcccccc
tgcgactcaatccgcgacacgatactggactgcatatacgcgcacagacagtactggagc
tgctacagctaccagcccgcgcggggggaccgccacgaggtgctcgtgcggtggcggggc
gacgagacgcgcccgtcgcgcttcgccacccgggactgctacccgacgcaggacgagccc
acccgccgggccctcgaggacagactcgaccacttgcgagcggtgacggatctgacgtca
ccgacccacgcggtcggttacgtgtacgacgaggcgatgctgaagcacaggaacgtggtc
gaaccaggccacgtcgaaagtccggagcgtatcatgaggatccacgagcgacatcgggac
ttcggtctgctggagaggctgcaccggctgcccggccgcgccgcctccgaccaggagata
ctgagcgtgcactccgacaaatatttggacaggttaaaggagctggcgtcgacgaagttg
cgggacctgaataaccagaaggaggagtacgactctgtgtactttcacccggagtcgctg
tccagcgctgctgtggcggccggctgcgtgctgcaggcggtggaggcggtggtgtcgggg
cagtgcggcgccgccgcgtgcgtggtgcgcccgcccggacaccacgccgcccgcgccgcg
cccgccggcttctgtctgctcaacaacgccgcgctggccgcccgcgccgcccaccgcgtg
ctgctgctcgactgggacgtgcaccacgggaacggcacgcaggcgctcacctacaccgac
gaccagatactgtacatatcgatacatcgttacgaccacggctcgttcttcccgcactcg
aaggacgcggactacacggccgtgggcacggggcggggcgagggctacaatatcaacata
ccttggaataagcgcggcatgggtgacgcggagtacatggccgccttcacccaggtcgtg
ctgccgatagctcacgagtataatccggatctggtgatcgtgtcagcggggttcgatgcc
tgcgtgggagacccactgggaggttgtaaagtaactccggagtgctacggccgcatgacg
cagctgctgcgagggctcgccggaggtcgggtggtgctctgtctagagggcggctacaac
accaccgccatctcctacgccatgaccatgtgcaccaaggccctgctgggagaccccata
ctgcaccactacgaaccgaggaccgcctgccactggtccgccgtcgagaccataaacaac
gtcatcagcacgcacaagaagtactggaagagcctcgccttccaactcgctctgccgtct
gaggacgtcctccagcggccggcgccgtcgcgaggcctgtccgacctgtccgacgcgctg
tcgtcttcatacgaggacaccaagtcggactccaagagcggcagtcaactggacacttcc
ctggagcacaacatggccaacctcagtctgaacaaatgtggagacggcgtgcactgcggc
actgacgacgaggacgaggccggcgacaccgcgtccaattctaatccggaatcgactggc
aataccaagagtttagtggattacttgtcggagaacatgcaggcgctcgtggagggcgag
atgttcgccgtggtgccgctgggctggtgcccgcacctggaggcgctgtacgccatcccc
gccggggtccgcttccagcagggactccagtgtgtcgactgcgaacacaccctggagaac
tgggtgtgtctgcactgctacattacggcgtgcgcgcgcggcgtgaacgctcacatgcag
gcgcactgggcggcgagcgggcacgcgctggtgctgtccctgcgcgacctgtccgtgtgg
tgctgcgcgtgcgacgcctacgtggaccacccgctgctctacgacgccaagaacaacgcg
caccgctgcaagttcggcgaggacatgccgtggtgctacgccgcagacgccgtagagatg
cactag
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