Bombyx mori (domestic silkworm): 101741929
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Entry
101741929 CDS
T02817
Name
(RefSeq) regulator of nonsense transcripts 2 isoform X1
KO
K14327
regulator of nonsense transcripts 2
Organism
bmor
Bombyx mori (domestic silkworm)
Pathway
bmor03013
Nucleocytoplasmic transport
bmor03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
bmor00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
101741929
03015 mRNA surveillance pathway
101741929
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bmor03019
]
101741929
Messenger RNA biogenesis [BR:
bmor03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
101741929
mRNA cycle factors
P-body specific factors
101741929
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MIF4G
Upf2
HA
Motif
Other DBs
NCBI-GeneID:
101741929
NCBI-ProteinID:
XP_037866512
UniProt:
A0A8R2QUM1
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Position
4:complement(14011995..14023754)
Genome browser
AA seq
1109 aa
AA seq
DB search
MTATNNDEANETPIEEPLKDLEENEKAALEEYTANLEARLKQKYEIRNQNLNCSRPPENY
FSKLDSGLKKNTTFVKKLKSFSASQLDVLLKDFATLNLTKYISEVAAAIAEAKLKMSDIP
AAITLCSVLHRTYADFSSNFFENWQKILTFKATDKITNSSKLRVDIRFYAELVAVGIFMN
KTGLPLLGNVLTVLINMDKEEHNNIPILLSFCKHCGDDYAGLMPRKIREASEKHNIPVPR
NTFLPAEKQTAVRTLLKDYFLSLTKHLLAERAQLQALHAANQRTLHTRGELSQERKEQLE
QHQTTYDKLLVNAQNFAEVLGEDLGEAGEPPTLSLTVIETQGSVTIGGNEDITMQAGTDP
WQDEDSRTFYTCLPDLKVFMPNYQMKEQTVKSKTETVTEEMLDEDLKEDELSDNEDPSVV
QEVETEEIQPPNVSNKHGLDTFLNELPNCINRELIDNAAVDFILNLNTKNNRKKLSRVLF
SVARTRLDLLPFYSRFAAILYPVLPEVCVDLCQMLKQDFKYHVRKKDQINIESKIKVVRF
IGELVKFNLYSKMEALYCLKVLLHDFKHHHIEMACNLLETCGRYLYCNPDTHQRTMIYLQ
QMMRKKTVSALDSRYVTQIENAFYYVCPPETPVQPKEEEPPLHQFIRKILHEDLQKSNEE
KILRLMRKLNWDDPEVSAIAIQHLAGGWRVRASARRALARLTAELAIWQEVVAPAVVDTI
LEEIRVTMEDPHPRYNQRRIATVRYLGELYNYKLLDSRDVFTVLYSFITFGVTNDHSSVS
VLDPSDNVFRIRLVCALLETCGAYFNSGSSKKRLDYFLTFFQNYYWFKFSDPIWTKDYQF
PIYVKYIYQECLTTLRPKLTLFTSWQQCKDAIDELRQTLYPELGEEEYDNEDQGDDSVND
GLDTIMETDDETDNPQLPDESSDEEPITENNVNDENEMQDEMAIEPRRPATKHVEDVEFE
SAFEKMVTENIAERQRENRPQQRDIAVPMTCRQTTKKTYEQLLQGKEGVEFVLMVRKGTK
PQYKSFSAPPELASNLQQQALADKQEMERVKRLTLNISERQEEEEYSAESGGGSGGIGNP
NRGQHVRQKYQHPKGAPDADLIFGPKKFK
NT seq
3330 nt
NT seq
+upstream
nt +downstream
nt
atgactgccaccaacaacgatgaggcaaacgaaacacctattgaagaaccgcttaaagat
ttagaagaaaatgagaaagcggctctcgaagagtatacagctaacttggaagccagattg
aaacaaaaatatgaaatacgtaatcaaaatttgaattgctctcgaccaccagaaaattat
ttttccaagctagattcaggtttgaaaaagaataccacatttgtaaaaaaactaaaatca
tttagtgcttctcagctggatgtacttttgaaagattttgcaacattaaatcttacaaaa
tatatatcagaagtggctgctgcaatagcagaagcaaaattgaaaatgtctgatattcct
gctgctataactctatgttcagttcttcatcgtacttacgctgatttttcatctaacttt
tttgaaaactggcaaaagattttaacattcaaagcgactgataaaataacaaattcatca
aaactgcgggtggatataagattttatgcagaattagtggctgtcggtatttttatgaat
aaaactggattgcctttgctgggtaatgtattaactgttctaataaacatggacaaagaa
gagcataacaatataccaattttgttatcattttgcaaacactgtggtgatgattatgct
ggacttatgcctagaaaaatacgagaagcttctgagaaacataatattcctgttcctcga
aatacatttttaccggcagagaaacaaacagcagttagaactctcttgaaagattacttt
ctttcactaaccaaacatctgctggcggaaagagctcaacttcaagctctgcatgcagca
aatcagaggactctgcacaccagaggagaactctcacaagaaagaaaagaacaattagaa
caacatcaaacaacttatgacaagctactagtaaatgcacaaaattttgctgaagttctt
ggagaagatttgggtgaagctggtgaacctcccactttgtccctgactgttatagagact
caaggaagtgtaaccattggtggcaatgaagacatcactatgcaagccggtactgatcct
tggcaggacgaagattctagaacattctatacatgcttgcctgacttaaaagtttttatg
cctaactatcaaatgaaagagcagactgtgaaaagcaaaactgaaacggtaacagaagaa
atgttagatgaagatttgaaggaggatgaattaagtgacaatgaggacccatctgtagtt
caagaagtagaaactgaagaaatacaaccaccaaatgtttccaataaacatggattagat
acatttttgaatgaacttcccaactgtatcaaccgagaactcatagataatgcagcagtt
gattttatcctgaatctcaatacaaagaataatcggaagaaactttcaagagttctcttc
agtgttgccagaacaaggctagatctgttgccattttactcaagatttgctgcgatttta
tatccagtactgccagaagtatgtgttgacctgtgtcaaatgttaaaacaagactttaag
tatcatgtcaggaaaaaggatcaaataaatattgaatcgaagataaaagtggtgcgattc
attggggaactggttaagtttaatttgtattcgaaaatggaggcgctgtactgtttgaaa
gtgttgctgcatgattttaagcatcaccatattgagatggcttgcaatctgcttgaaacg
tgtggtagatatttatactgtaatccagatacacaccaaaggactatgatatatttacag
caaatgatgcgaaaaaaaactgtttcagctctagattcgcgatatgtaacacagatagaa
aacgcattctattacgtttgccctcccgaaactcctgttcagcctaaagaagaagagcca
ccacttcatcaatttatcagaaaaatacttcatgaagacttgcagaaaagtaatgaggaa
aaaattcttagactaatgcgaaaactgaattgggatgacccagaggtatccgccattgcc
atacaacatctcgcaggaggttggagggtaagagcaagtgccagaagggctctggccaga
ctgacagctgaactggcaatctggcaagaagtagtagctccagcagtcgttgacacaata
ttagaagaaataagggtaacaatggaagacccacatccaagatataatcaaagaaggata
gctactgttcggtatctcggagaactctataattataaattattagattctcgagatgtt
ttcactgttttatattcatttataacatttggtgtcaccaatgatcacagcagtgtatct
gtattggacccatctgataatgtttttagaataagactagtctgcgctctgcttgagact
tgtggtgcatacttcaacagtggttcgagcaaaaaaagattagactattttttgaccttc
ttccaaaattactattggttcaagttctctgatccgatatggacaaaagactatcaattc
cctatttacgttaaatatatttatcaagaatgcctgacgactttacgccctaagttgact
ttgtttacgagctggcaacagtgtaaggatgcaatagatgaactacgacagactttatat
ccggagctaggagaggaagagtacgataatgaggatcaaggtgatgatagtgtgaacgac
ggcttagacacaatcatggaaacggatgatgaaacggacaatccgcaattgcctgatgaa
agctctgatgaagaaccgattaccgaaaataatgttaatgacgaaaacgaaatgcaagat
gaaatggcaattgagccacgaagacctgctactaaacatgtagaagacgttgagttcgaa
tcggcattcgagaaaatggtaacagaaaatattgcagaaagacaacgggagaatagaccg
caacaacgcgacattgctgtcccgatgacctgcagacagactacgaagaagacgtatgaa
cagctcttgcaaggaaaagagggcgtggaattcgttcttatggttcgtaaaggaacgaaa
ccacaatataaatcgttcagtgctccaccggaattggccagcaatctacaacaacaagct
ttagctgataaacaagaaatggaacgagttaaacgacttactctaaatatatcggaaaga
caagaagaagaagaatatagcgcagagagcggtggtggatcgggaggtatcggtaatcct
aacagaggtcagcatgttcgtcagaaataccaacatcccaaaggggcaccggacgccgat
ctcatattcggtcctaagaaatttaaataa
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