KEGG   Bombyx mori (domestic silkworm): 101742003
Entry
101742003         CDS       T02817                                 
Name
(RefSeq) DNA polymerase epsilon catalytic subunit 1
  KO
K02324  DNA polymerase epsilon subunit 1 [EC:2.7.7.7]
Organism
bmor  Bombyx mori (domestic silkworm)
Pathway
bmor03030  DNA replication
bmor03410  Base excision repair
bmor03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:bmor00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    101742003
   03410 Base excision repair
    101742003
   03420 Nucleotide excision repair
    101742003
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:bmor03032]
    101742003
   03400 DNA repair and recombination proteins [BR:bmor03400]
    101742003
Enzymes [BR:bmor01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     101742003
DNA replication proteins [BR:bmor03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   DNA polymerase epsilon complex
    101742003
DNA repair and recombination proteins [BR:bmor03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     DNA polymerase epsilon complex
      101742003
SSDB
Motif
Pfam: DUF1744 POL2_thumb DNA_pol_B_exo1 zf-DPOE zf_DPOE_2 DNA_pol_B DNA_pol_B_exo2 RNase_H_2 CAP-like_CFAP184
Other DBs
NCBI-GeneID: 101742003
NCBI-ProteinID: XP_004923352
UniProt: A0A8R1WHZ3
LinkDB
Position
25:3950907..3993852
AA seq 2227 aa
MVLQNTGKYRPDKDDSARREGTSSGGLKEESSETRIRAALENDRIDSKYGFDRVRDLKER
TGYLINMHTAEVLDEDKRLVAAMDYYFIEMDGTRFKISLMFQPYFLIMARRECEQEVIQY
ISKKFASSVQKIEVLEKEDLDLMNHLSGLKQRYIKLSFMSQNDMMKVRREILTAVNKNKE
REKKDVIYAEMLTNALTSAAAIEHAKKTTDHMENILDIREHDVPYHVRVSIDMRIFCGTW
YTVKCRGTDPPIFTKRDDIIERPDPIVLAFDIETTKLPLKFPDSQTDQIMMISYMIDAQG
YLITNREIISVDVEDFEYTPKPEFEGQFIVFNEPNELALIQKFFDHIMDVKPHIFVTYNG
DFFDWPFVEARAAILGLDMKQEIGFSKVTSRDNTYVCRPAMHMDCLCWVKRDSYLPVGSQ
GLKAVAKAKLRYDPVELDPEDMCRMASEQPQVLSNYSVSDAVATYYLYMKYVHPFIFALC
TIIPLEPDEVLRKGSGTLCESLLMVEAFHANIVFPNKQVEELNKLTSDGHVLETETYVGG
HVEALESGVFRADIKCKFRIAPTAVDKLLENTEKTMRHAIEVEEGIPLEMVTNFDEVCGE
IKAKLQHMKEHPRRDENPLIYHLDVGAMYPNIILTNRLQPSAMVNASTCAVCDYNKPGAT
CQRHMEWMWRGDYLPATRSEYQRIQQQLETEKFPPLHPGGPPRPFHTLPKEEQAAYEKKR
LADYCKVAYKKTKVTRSEIRTTTICQKENSFYVDTVRAFRDRRYEYKALNKQAKAKVSEA
VASGDAAEIKSAKSREVLYDSLQLAHKCILNSFYGYVMRRGARWHSMEMAGIVCYTGANI
IMRAREIIEQVGRPLELDTDGIWCILPSSFPENVTIHTNHPKKKKINVSFPNAVLNAMVK
DHFTNDQYFELVDPEQKRYEQRSENSIFFEVDGPYLAMVLPASKEEGKRLKKRYAVFNFD
GSLAELKGFEVKRRGELQLIKIFQSSVFEAFLKGNDLKSCYGAVARVADYWLDVLYSRGS
NMPDAELFELISENRSMSKKLEDYGGQKSTSISTAKRLAEFLGDQMVKDAGLACRFIISK
KPEGAPVTERAIPLAIFQSPAAVKRHHLRRWLKDSSVSEHIDIRDVLDWAYYIERLSGAI
QKIITIPAAMQGLDNPVPRVQYPDWLHKKMLAKTDKYKTRKITDMFSAQPRELRTVEEDA
EEAAGADTSNTEMDMEDIGNDKTGRATIIRPVVHTMKRKRTESPPQDAAATWREALGPPP
PFGNTKEERRNWILFQKRKWLWQMEQRGLRNRNKRGKIDSDIMPPPRSSGPAATLGSFIR
RAQRTLLNTPWQIIQVAETAEPGLFKVWALVGAELHQVKVSVPRVFYVNQRVCRGADSGR
YWRRCSRLLPRAHPVLHLYQYSVPEQLYREHQEELMGELSAPEIEGIYETQMSLEFRILV
QLGCICAVEPQEARRMIQFGSNNMDSFTLNQLQFKSVAHQPYLPKQDGQFPIKHIFLYQH
SSVNSSRSMWALILGPLKKGYIFVQDTVKTNQVPNMSTLYAAERTAKINQGTDENTLPGP
ELSWEVVVESSTRALCRGLQAALGRGRTERAGPALLAVQAALSLPALTALMPGLVDYPIV
PLHVRDVETLYNTLEWQRIGARAIVRHYLNLESVLALTIEQCRYFHVPLGNMPADPTLFG
ADLFYARHLVKHNFVLWCSNLERPDLGGREIDDNRLASEAEEGGAWSGGAGGAHGGVCVE
LGLDALSVCALLQAHLVLQAEGTSAATAFGHAPTSLQHLLDNTGPNASLNYDEAAQCSAA
FKILRTMVASWLRDVTQYKNVFADFQITHFYRWLKTPTSLLYDPALRRTLYNLMKKLFLM
LLAEFRRLGSVLVHADFNKILLSTKKTSVVDGIGYVEFVVQSIRNKELFHGIDIRYRQCW
VHLLWLDEANYAGIQGKLPEGLTEVGSSQVPPSNNEDGDTDEESSIVMHWNLAKFLPGFV
REQFVSAVAGYLAAARTRPADLPALLRGEISQKLFRVTEKINSRMPTLRLSDIGPQPGLK
ADALSDVTPALLFVNAVCKVFSLDPTLDEEMTLVRRNLLRLIGVGEFSSAAEWREPCAAC
VLTELTCRVCNHCRDLDLCRDARDDTERPACLCPTCGTAYDNQEIEWRLIETMNKRTMAY
TLQDLICSRCHQVKRENLSVVCDCAGDFSLMVPVTEIKDQLMTFKTIAEYYQMPLLLEQI
DFNLKNM
NT seq 6684 nt   +upstreamnt  +downstreamnt
atggtgcttcaaaatactggaaaataccgacccgataaagatgattctgctagaagagaa
ggaacttcttcaggtgggctcaaggaagagtcatcggaaactagaattcgtgccgctctg
gagaatgacagaattgactcaaagtatggtttcgatcgagtgagagatttaaaagaaagg
actggctacttgatcaatatgcacacggctgaggtactcgatgaagacaaacgattagtt
gctgccatggattactatttcatagagatggacggtaccagattcaaaatttcattaatg
tttcaaccatattttctaataatggccagaagagaatgtgaacaggaagttatacaatac
atctctaagaagtttgctagttcagtgcaaaagattgaagtattggagaaggaagatttg
gacttgatgaaccacttatcaggtctgaaacagcgttacataaaattatcatttatgtct
caaaatgatatgatgaaagtccgacgggagatattgacggcagttaataaaaataaagag
cgggaaaagaaagatgttatttatgctgaaatgttaactaatgcattaaccagtgcagca
gctatcgaacacgctaagaaaactactgatcacatggaaaatattttggacatccgggaa
catgatgtgccatatcatgtaagagtctctatagacatgagaatattctgtggcacatgg
tacacagtgaaatgcagaggtactgaccctcctattttcacaaaacgagatgacatcatc
gagagaccagatcctatagtattggcctttgatatagaaactacaaaactaccattaaag
tttccagactcgcaaacagatcaaataatgatgatctcttacatgatcgatgcacagggg
tacttaataacaaacagagaaattatatcggtcgacgttgaagactttgaatatactcct
aaaccggaatttgaaggccaattcatagtatttaatgaaccaaatgagctggcacttata
cagaagtttttcgatcatatcatggatgtgaaaccacacatctttgtcacatataacggt
gatttcttcgattggccatttgtggaagctcgtgccgcgattctagggctggacatgaag
caggagatagggttcagtaaggtgacgtcacgcgacaacacgtacgtctgcagacctgcg
atgcacatggactgcttatgctgggtgaaaagagactcgtatctgccggtcggctcgcag
ggcctgaaggcggtcgctaaagccaagctgaggtacgaccccgtcgagctggaccctgaa
gacatgtgcaggatggcgtccgaacagcctcaggtgctgtcgaactactcggtgtcggac
gcggtcgccacgtactacttgtacatgaagtacgtgcatccgttcatatttgccctctgc
accattatcccgctggagcccgacgaggtactccggaaaggttccggcacgctgtgcgag
tcgttgctgatggtcgaggcgttccatgcgaacatcgtgttcccgaacaagcaggtggag
gagctgaacaagctgacgagcgacgggcacgtgctggagacggagacttacgtcggggga
cacgtcgaggctctggagtccggtgtattcagagcggacattaaatgcaagttccgtatc
gccccaacggccgtggacaagctgctggagaacaccgagaagaccatgaggcacgccata
gaggtggaggaaggtataccgctggagatggtcacgaatttcgacgaggtctgcggagag
attaaagcgaaactacaacatatgaaagagcacccgcgaagggacgagaaccctttgatt
tatcatttggacgtcggcgctatgtaccctaacatcatattgacgaatagattgcagccc
tctgcgatggtgaatgccagtacatgcgccgtctgtgactacaacaagcccggggccact
tgccagagacacatggagtggatgtggcgcggggattacttaccggctacgaggagcgag
taccaacgtatacagcagcagctggaaactgaaaaatttccacctctacatcctgggggt
ccacccaggcccttccacacgctgccgaaagaggaacaggctgcgtacgagaaaaaacga
ttagcggattactgcaaggtcgcgtataagaaaaccaaagttactagaagtgaaataaga
acaaccactatatgccagaaggagaactctttctatgtggatactgtacgtgcgttcaga
gatcgtcgttacgaatacaaagctctgaacaagcaagcgaaagcgaaggtctccgaggcg
gttgctagcggagacgcggcggagatcaaatccgccaaaagcagagaagttttgtacgat
tcactgcaattggcacataaatgtattctcaattctttctatggctacgtcatgaggaga
ggtgctcgatggcacagcatggagatggcggggatcgtgtgctacacgggcgccaacatc
atcatgcgcgctcgggagatcatcgaacaagttggcagaccgctcgagttggatactgac
ggtatctggtgcatattaccgtcatcgttcccagaaaacgtgaccatccacacgaatcat
ccgaagaaaaagaagattaatgtttccttccctaacgctgtactcaatgcaatggttaag
gatcattttacaaacgaccagtacttcgaactcgtggatccggaacagaagagatacgag
cagcgctcggaaaactcgatattctttgaagtggacggcccttacttggccatggtgttg
ccggcttctaaagaagaaggcaaaaggttgaagaagcgttatgccgtcttcaattttgac
gggtcattagctgaattaaaaggtttcgaagtaaaacgtcgcggcgaactgcaactcatc
aaaatatttcaatcttccgtattcgaggccttcctcaaaggtaacgatctgaagtcgtgc
tacggcgccgtggcccgggtcgcggactattggctggacgtgctgtacagccggggctcc
aacatgcccgacgccgaactcttcgagttgatatcggagaaccgttccatgtccaagaag
ctggaggattacggcggacagaagtctacgtcgatatcgaccgccaagagactggccgag
ttcctcggtgatcagatggtcaaggacgccggcttggcttgcagattcataatatcgaag
aagcccgagggtgctccggtgacggaacgagcgatcccgctcgccatcttccagtcgccg
gccgccgtgaagcggcaccacctgcggcgctggctcaaggactccagcgtctccgagcac
atcgacatccgcgacgtgctggactgggcctactacatcgagaggctcagcggggccata
cagaagatcatcaccataccggccgccatgcaaggcttggacaatccggtgccccgggta
cagtacccggattggttgcacaagaagatgctcgccaaaacggataagtacaaaacgagg
aagatcacggacatgttcagcgcgcagcccagggaactacgcaccgtggaggaagacgcg
gaggaagccgctggtgctgatacctcgaacacagaaatggacatggaagacattggcaat
gacaagacagggagggccacaataattcgtccggtagtgcacactatgaagaggaagcgg
actgaatctccgcctcaagacgccgccgccacgtggagagaggcgctgggacctccgccg
cctttcggaaatactaaggaagaacgaagaaattggattttgtttcaaaaaagaaaatgg
ctgtggcaaatggagcaacgtggcttaagaaatcgaaacaaacgaggtaaaattgacagt
gacataatgccgccgccgaggagttccgggccggccgccacgttaggtagttttatcagg
agagcacagcgcaccttgttgaatacaccatggcaaattatacaggtagcggaaacagcc
gagccggggctgttcaaggtgtgggcgctggtgggcgccgagctgcaccaggtgaaggtg
tcggtgccgcgcgtgttctacgtgaaccagcgcgtgtgccgcggcgccgacagcggccgc
tactggcgccgctgcagccgcctgctgccccgcgcgcaccccgtgctgcacctctaccag
tactccgtgcccgaacagctctacagggaacatcaggaagagctcatgggtgaattatcg
gctccggaaatagaaggtatttacgagacacagatgagcttagagttcaggattctggta
caactcggatgtatctgcgctgtggagccgcaagaggcgagacgaatgatacagttcggt
tcaaacaatatggattcgtttacgttgaatcaactacagttcaagagtgtcgcacatcaa
ccttacttaccgaagcaggatggacagtttccgattaaacacatattcctgtaccagcat
tcgtctgtgaattccagtcgcagtatgtgggcattgatactgggtcctctgaaaaaagga
tatattttcgtacaggacacggtcaagaccaatcaagtacctaacatgagcaccctttac
gcagccgaaaggacagctaaaataaatcaagggacagacgagaacacgctgccgggccct
gagttgtcgtgggaggtggtggtggagagctcgacgcgcgcgctgtgccgcgggctgcag
gcggcgctgggccgcggccgcacggagcgcgcggggccggcgctgctggccgtgcaggcc
gcgctctcgctgcccgccctcactgcgctcatgcccggtctggttgactacccgatagtg
ccgctgcacgtccgcgacgtggagaccctgtacaacacgttggagtggcagaggataggc
gcgagggccatcgtcaggcactacctcaacttggagtcggtgctggcgctcaccatcgag
cagtgcagatatttccacgtgccgctgggcaacatgccggcggacccgacgctgttcggc
gcggacctgttctacgcccgccacctcgtcaagcacaacttcgtgctctggtgctccaac
ctcgaacgtccggacctcggagggagagagatcgacgataatagactggcgagcgaggcg
gaggagggcggggcgtggagcggcggcgcgggcggcgcgcacggcggcgtgtgcgtggag
ctggggctggacgcgctcagcgtgtgcgcgctgctgcaggcgcacctcgtgctgcaggcg
gagggcaccagcgccgccaccgccttcgggcacgcgcccaccagtctacagcacctgctc
gacaacaccggtccgaacgcgtccctcaactacgacgaggcggctcagtgcagcgccgcc
ttcaagatcctgaggacgatggtcgcgtcctggctccgtgacgtcacgcaatacaaaaac
gtcttcgcagacttccaaataacgcacttctacaggtggttaaaaacgccgacgtctctg
ctgtacgacccggcgcttcggcgcaccctgtacaacctgatgaagaagctgttcctgatg
ctgctggcggagttcaggcggctgggctcggtgctcgtgcacgccgacttcaacaagatc
ctgctcagcactaagaagacttcggtcgtcgacggaataggatacgtagaattcgtagtg
cagagcataaggaataaggaactgttccacggcatcgatattaggtaccggcagtgctgg
gtgcatctgctgtggctcgacgaggccaactatgcggggatacagggtaaacttccggaa
ggcttaactgaagtgggatcttctcaagttcctccgagcaacaacgaggatggcgacact
gatgaggagagttcgatagtgatgcactggaacctggccaagttcctgccgggcttcgtc
cgggagcagttcgtgtccgccgtggccgggtacctggccgccgcccgcacgcgccccgcc
gacctgcccgccctgctgcgcggcgagatctcacagaaactgttccgagtaacggagaag
ataaactcgcggatgccgacgctccggctgtcggacatcgggccgcagcccggcctcaag
gcggacgcgctcagtgacgtcacgcccgccctgctcttcgtcaacgccgtctgcaaagtg
ttctccctcgatccgaccttagacgaagagatgacgctggtgcggcgcaacctgctccgt
ctgatcggcgtgggcgagttcagcagcgcggcggagtggcgcgagccgtgcgccgcgtgc
gtgctgaccgagctcacgtgccgcgtgtgcaaccactgccgcgacctcgacctgtgcagg
gacgcgcgagacgacacggaacgtccggcgtgtttatgtccaacttgtggaacagcatat
gataatcaggaaatagaatggcgactaatcgagacgatgaacaaacgtacgatggcgtat
acgctgcaagatcttatatgtagccgatgtcaccaggtaaaacgtgagaatttgtctgtg
gtctgtgattgtgctggagatttttcgctgatggttcccgtaacagagatcaaagaccaa
ctaatgacttttaagacaatagccgaatattatcagatgccattattgttagaacaaatt
gactttaatcttaaaaacatgtga

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