KEGG   Bombyx mori (domestic silkworm): 101742327
Entry
101742327         CDS       T02817                                 
Name
(RefSeq) protein CASC3 isoform X1
  KO
K14323  protein CASC3
Organism
bmor  Bombyx mori (domestic silkworm)
Pathway
bmor03013  Nucleocytoplasmic transport
bmor03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:bmor00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    101742327
   03015 mRNA surveillance pathway
    101742327
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:bmor03019]
    101742327
Messenger RNA biogenesis [BR:bmor03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    EJC complex
     101742327
SSDB
Motif
Pfam: Btz
Other DBs
NCBI-GeneID: 101742327
NCBI-ProteinID: XP_004922601
UniProt: A0A8R1WH33
LinkDB
Position
20:complement(2174831..2199596)
AA seq 666 aa
MTSVVRRREHDDSGEYSDASQDIEHNNSLNEGPPESDYDSQGSDSDHSERDPEAQEGERR
VDDDEDRSNPQYIPKRGTFYEHDDRTAASGEESVNTTSETASEKKEGSETTTERRRPPRK
SDIVNKWTHDKYNENEQMPKSRDELVAIYGYDIRNEDAPPHARRNRRYGRGPNKYTRTWE
DEEAYRRQNALPLRKPPNPEDFPELEASAKKPGRKVRAPRPRSKSQPAAGESPERAAQLR
RNASIKTAKPKPPFTKTTPPKNLKPQDKKLPALETLTITAPANNNNNNNNSQGQSQRKVS
AMVAQQRPVPTDINKKKPLPGQNQQPSSPAPNKSPPLQTKPQNQTSHPHPQQTTGAEPRG
GSKRYSSLRQRPLAEPYTPQPQPQTQTQTPVQTSSPGAAQTQQPHRYAGQSEFTAGPAAP
APHAPHLAHQVRCTPNAPAPGHTPPPLQALPQQQQQQQQQVRLGIIDQPQQVVSHPHHPI
HNIQPQPHTINQLPPAQGYAPPAMMPAQYMQQSGAAPVFGGGLFPQGAAPPYPLYPHHNY
ATQTGGVTYYNCAEQDQQPRAQRRPTAAIPIVKPHASERAANSTEKDNIDRIVENMFVRK
PWPATHGADKEKSSEARSSQESGSKESSQPDSLTSSSISTDSRPSEAKEEKEKDSRENET
EQPPEA
NT seq 2001 nt   +upstreamnt  +downstreamnt
atgacgtccgtggtacgaagacgggagcacgacgattcgggagaatattcagatgcttct
caggacatcgaacacaataactcgttgaacgaagggccgcccgagtccgattatgactcg
cagggtagcgattctgaccactctgaacgggatccagaggcacaggaaggtgaacgcaga
gttgatgatgatgaagataggagcaatcctcagtatatccccaagagaggaacattctac
gagcatgatgaccgaaccgcagcaagcggcgaggaatctgtcaacacgacatccgaaacg
gcttcagagaaaaaggagggctccgagacgacgaccgaacgacgccgccctccacgaaaa
tctgacattgtcaataaatggacgcacgacaaatacaacgagaatgaacagatgccgaaa
tcacgtgacgagctggtagcgatctacgggtacgacatacgcaacgaagatgcccctcct
cacgcgagacgcaacagaagatacggtcgtggacccaacaagtacacacgtacctgggaa
gacgaggaggcgtaccgaagacagaacgcgttgccgctgagaaaaccaccgaaccccgag
gacttccctgaacttgaagctagcgctaagaaaccagggaggaaggttcgcgccccccgg
cctcggtccaagtcgcagccggcggcgggcgagtccccggagcgcgccgcccagctccgc
cggaacgcctccatcaaaaccgcgaagcccaagccgccgttcacaaagacgacgcccccg
aagaacctgaagccgcaggacaagaaattaccggcgctcgaaactttgacaatcaccgct
ccggcgaataataacaataacaacaataacagccaaggtcagtcgcagcggaaggtgagc
gctatggtggcgcagcagcggccagtgcccacggacatcaacaagaagaagccgcttccc
ggccagaaccagcagccctcgagtccagcccccaacaagtcgccgcccctgcaaacgaaa
ccacagaaccagacctctcaccctcacccgcaacagaccactggcgccgagccccgcggc
ggcagcaagcgctacagcagcctgcggcagcgccccctcgctgagccctacacgccccaa
ccgcagccgcagacgcagacccagacccctgtccagacctctagtccgggggcagcgcag
acccagcaaccgcacagatatgccggtcaaagcgagttcaccgccggcccggccgcgcct
gcaccccacgcgccgcacctcgcgcaccaggtgcggtgcacgccgaacgcgccggccccc
ggacacacgccgccgcccctccaggctctgccacaacaacaacaacaacagcagcagcag
gtcagactggggatcattgatcagccgcaacaagtcgtgtcacatccccaccaccccata
cacaacatacagccgcagcctcatacgataaatcaattaccacccgcccagggatacgcg
ccccccgccatgatgcccgcgcagtacatgcagcagagcggcgcggcgcccgtgttcggc
ggcgggctgttcccgcagggcgcggcgcccccctacccgctctacccgcaccacaactac
gcgacccaaaccggtggggtgacgtattacaactgcgcggagcaggaccaacagccgcgt
gcccagcggcgccccaccgcagccatacccatcgtcaagccgcacgcctctgaaagagct
gccaattcaaccgagaaagacaacatagatcgtatcgtcgagaatatgttcgtgaggaag
ccctggcccgcgacgcacggagccgataaagagaaatcatcggaggcccggagttcgcaa
gagtccggcagcaaggagtcctcgcagcccgacagcctcacgtccagctccatctcgacg
gactcgagaccttcggaggccaaggaagagaaagagaaggacagccgagagaacgagacg
gagcaaccgcccgaggcctga

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