Bombyx mori (domestic silkworm): 101742327
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Entry
101742327 CDS
T02817
Name
(RefSeq) protein CASC3 isoform X1
KO
K14323
protein CASC3
Organism
bmor
Bombyx mori (domestic silkworm)
Pathway
bmor03013
Nucleocytoplasmic transport
bmor03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
bmor00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
101742327
03015 mRNA surveillance pathway
101742327
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bmor03019
]
101742327
Messenger RNA biogenesis [BR:
bmor03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
101742327
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Btz
Motif
Other DBs
NCBI-GeneID:
101742327
NCBI-ProteinID:
XP_004922601
UniProt:
A0A8R1WH33
LinkDB
All DBs
Position
20:complement(2174831..2199596)
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AA seq
666 aa
AA seq
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MTSVVRRREHDDSGEYSDASQDIEHNNSLNEGPPESDYDSQGSDSDHSERDPEAQEGERR
VDDDEDRSNPQYIPKRGTFYEHDDRTAASGEESVNTTSETASEKKEGSETTTERRRPPRK
SDIVNKWTHDKYNENEQMPKSRDELVAIYGYDIRNEDAPPHARRNRRYGRGPNKYTRTWE
DEEAYRRQNALPLRKPPNPEDFPELEASAKKPGRKVRAPRPRSKSQPAAGESPERAAQLR
RNASIKTAKPKPPFTKTTPPKNLKPQDKKLPALETLTITAPANNNNNNNNSQGQSQRKVS
AMVAQQRPVPTDINKKKPLPGQNQQPSSPAPNKSPPLQTKPQNQTSHPHPQQTTGAEPRG
GSKRYSSLRQRPLAEPYTPQPQPQTQTQTPVQTSSPGAAQTQQPHRYAGQSEFTAGPAAP
APHAPHLAHQVRCTPNAPAPGHTPPPLQALPQQQQQQQQQVRLGIIDQPQQVVSHPHHPI
HNIQPQPHTINQLPPAQGYAPPAMMPAQYMQQSGAAPVFGGGLFPQGAAPPYPLYPHHNY
ATQTGGVTYYNCAEQDQQPRAQRRPTAAIPIVKPHASERAANSTEKDNIDRIVENMFVRK
PWPATHGADKEKSSEARSSQESGSKESSQPDSLTSSSISTDSRPSEAKEEKEKDSRENET
EQPPEA
NT seq
2001 nt
NT seq
+upstream
nt +downstream
nt
atgacgtccgtggtacgaagacgggagcacgacgattcgggagaatattcagatgcttct
caggacatcgaacacaataactcgttgaacgaagggccgcccgagtccgattatgactcg
cagggtagcgattctgaccactctgaacgggatccagaggcacaggaaggtgaacgcaga
gttgatgatgatgaagataggagcaatcctcagtatatccccaagagaggaacattctac
gagcatgatgaccgaaccgcagcaagcggcgaggaatctgtcaacacgacatccgaaacg
gcttcagagaaaaaggagggctccgagacgacgaccgaacgacgccgccctccacgaaaa
tctgacattgtcaataaatggacgcacgacaaatacaacgagaatgaacagatgccgaaa
tcacgtgacgagctggtagcgatctacgggtacgacatacgcaacgaagatgcccctcct
cacgcgagacgcaacagaagatacggtcgtggacccaacaagtacacacgtacctgggaa
gacgaggaggcgtaccgaagacagaacgcgttgccgctgagaaaaccaccgaaccccgag
gacttccctgaacttgaagctagcgctaagaaaccagggaggaaggttcgcgccccccgg
cctcggtccaagtcgcagccggcggcgggcgagtccccggagcgcgccgcccagctccgc
cggaacgcctccatcaaaaccgcgaagcccaagccgccgttcacaaagacgacgcccccg
aagaacctgaagccgcaggacaagaaattaccggcgctcgaaactttgacaatcaccgct
ccggcgaataataacaataacaacaataacagccaaggtcagtcgcagcggaaggtgagc
gctatggtggcgcagcagcggccagtgcccacggacatcaacaagaagaagccgcttccc
ggccagaaccagcagccctcgagtccagcccccaacaagtcgccgcccctgcaaacgaaa
ccacagaaccagacctctcaccctcacccgcaacagaccactggcgccgagccccgcggc
ggcagcaagcgctacagcagcctgcggcagcgccccctcgctgagccctacacgccccaa
ccgcagccgcagacgcagacccagacccctgtccagacctctagtccgggggcagcgcag
acccagcaaccgcacagatatgccggtcaaagcgagttcaccgccggcccggccgcgcct
gcaccccacgcgccgcacctcgcgcaccaggtgcggtgcacgccgaacgcgccggccccc
ggacacacgccgccgcccctccaggctctgccacaacaacaacaacaacagcagcagcag
gtcagactggggatcattgatcagccgcaacaagtcgtgtcacatccccaccaccccata
cacaacatacagccgcagcctcatacgataaatcaattaccacccgcccagggatacgcg
ccccccgccatgatgcccgcgcagtacatgcagcagagcggcgcggcgcccgtgttcggc
ggcgggctgttcccgcagggcgcggcgcccccctacccgctctacccgcaccacaactac
gcgacccaaaccggtggggtgacgtattacaactgcgcggagcaggaccaacagccgcgt
gcccagcggcgccccaccgcagccatacccatcgtcaagccgcacgcctctgaaagagct
gccaattcaaccgagaaagacaacatagatcgtatcgtcgagaatatgttcgtgaggaag
ccctggcccgcgacgcacggagccgataaagagaaatcatcggaggcccggagttcgcaa
gagtccggcagcaaggagtcctcgcagcccgacagcctcacgtccagctccatctcgacg
gactcgagaccttcggaggccaaggaagagaaagagaaggacagccgagagaacgagacg
gagcaaccgcccgaggcctga
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