Bombyx mori (domestic silkworm): 101742390
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Entry
101742390 CDS
T02817
Name
(RefSeq) pre-mRNA-processing factor 40 homolog A isoform X1
KO
K12821
pre-mRNA-processing factor 40
Organism
bmor
Bombyx mori (domestic silkworm)
Pathway
bmor03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
bmor00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
101742390
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
bmor03041
]
101742390
Spliceosome [BR:
bmor03041
]
Complex A
U1 snRNP components
U1 related factors
101742390
Complex B
101742390
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
FF
WW
WW_TCERG1
RhoGAP-FF1
DUF4853
Motif
Other DBs
NCBI-GeneID:
101742390
NCBI-ProteinID:
XP_004925557
UniProt:
A0A8R2AGT6
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Position
12:10702232..10724050
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AA seq
809 aa
AA seq
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MEPPSAGTSSPGLLNAPPLLPPPMLSGMPPPMPPAVAMPPVPGLPPNMATLPPPMGFPPM
LPPPFSIPPPGFPAFKPELNAPAPDVAPSANQSSPWSEHKAPDGRTYYYNSVTKQSLWEK
PDDLKTSAEKLLSACVWKEYTTNTGRLYYHNIETKESSWVVPKELQEIKDKIAAEEAAQR
IVMEVTPSEVPLPAEPAGSSALDEAMAKTLAAIDTSLATSIPVPDEIEPEDTVSINNETQ
EQPEMLYKDKKEAIEAFKELLKDKNIPSNATWEQCVKVISKDPRYVTFKKLNEKKQAFNA
YKTQKLKDEREEQRLKTKKNRENLEEFLLSCERVTSLTKFYKCEEMFSNLEIWRCVPEAD
RRDIFEDCIFTIAKREKEEAKALKKRNMKMLTQVLENMSEITYSSTWSEAQVLLLENSAF
KNDVSLLGMDKEDALIVFEQHIRNLEAEYQQEREQIKKRNKRQQRKNRDNFLALLDSLHE
EGKLTSMSLWVELYPVISADMRFSAMLGQSGSTPLDLFKFYVENLKARFHDEKKIIKEIL
KDKNFEVKPETTFEEFATVVCEDSKSASLDAGNVKLTYNSLLEKAETRKKEKLKEESKAQ
KKIESAFKWALSDANIDHLLSWSEVKEKLDLNAPEFAAVTSEEDRIRIYKDYQHEQEESC
MHYHHPKPKKSKRSKKKKRSHSASLSRSASASRSPSPAPSHGTWSSDEGRKPKKTKKKHR
RHSPAPKSPSPEEGGITDDEEVIRHKNKKTKRSAPSSPEEEQEPEIVYKPKKKKDKKDKK
ERSGAAWSDADLESRRAALLAQLHEHEAD
NT seq
2430 nt
NT seq
+upstream
nt +downstream
nt
atggagccacccagtgcggggaccagttctccgggtctcttaaacgcgcctcctctttta
ccgcctccaatgctaagcggtatgcctccaccaatgccgcccgctgtggcaatgccacca
gtgcctgggttacctccaaatatggctacattaccaccgcccatgggctttcctcccatg
ttgccgcctccattttcaataccaccgccaggattccctgcattcaaaccggaattaaat
gctcctgcaccagatgttgctccatcggcaaatcaaagtagtccatggtctgaacataag
gcccctgatggaagaacatattactataattctgtaaccaaacaaagcttgtgggaaaaa
cctgacgacttaaaaacgtcagctgagaaactattatctgcttgtgtatggaaagaatat
accacaaatactggcagactttactatcataatattgagacaaaggagtccagttgggta
gtaccgaaagaattacaggagattaaagacaaaattgctgctgaagaagctgctcagcgc
attgtgatggaagtaacaccgagtgaggtgccgctgccggcagagcctgcaggctcctcc
gcccttgacgaagctatggctaaaacattagcagccattgatacctcattggccacatcc
atacctgtacctgacgaaatagaaccagaagacacagtttcaattaataatgaaactcaa
gaacaacctgagatgttgtacaaagacaagaaagaagctattgaagcatttaaagaactc
ctgaaagataagaatataccctcaaatgcaacatgggaacaatgtgtaaaagttatttca
aaagatccacgatatgtcacttttaaaaaactcaatgaaaagaaacaagcgttcaatgct
tacaaaactcaaaaactaaaagatgaaagagaggaacagagactgaaaacaaaaaaaaat
cgcgagaatcttgaagagtttttgttgagttgcgaacgggtgacatctctaacaaaattt
tacaaatgtgaagaaatgttcagcaatctagagatttggcgatgtgttccagaagccgat
cgtagggacatatttgaagattgtatttttactatagcgaaacgggaaaaagaagaagca
aaggctttaaagaaacggaacatgaaaatgttaacccaggtattagagaacatgagcgaa
attacgtacagtagtacgtggagtgaggcacaagtactattgctagaaaattcagctttt
aaaaatgatgttagtttactaggtatggacaaggaagatgccctgattgtatttgaacaa
cacatacgaaatttagaagctgaatatcaacaagaaagagaacaaattaaaaagaggaat
aaaagacaacaaagaaaaaatagagacaactttttggctttgctggacagtcttcatgaa
gaaggtaaattgacatcgatgtctctatgggtcgagctgtatccggttatttctgcagac
atgagattttcagctatgttaggacaaagcggatcgacaccgttagacttattcaagttt
tacgttgaaaatttgaaagcgaggttccacgacgaaaagaagataataaaggagatactg
aaagacaagaatttcgaagttaaaccggagaccacgttcgaggagttcgccaccgtcgtg
tgcgaggacagcaagtccgcctcgctcgacgccggaaatgtcaaacttacttacaattcg
cttttagagaaggctgaaactagaaagaaggagaaattgaaagaagaatcgaaagctcaa
aagaaaatagaatctgcatttaaatgggcattgagtgatgcaaacatcgaccacctgctc
tcgtggagcgaggttaaggagaaacttgacttgaacgcgccagagtttgccgccgtcacc
agtgaagaagacagaattagaatttataaggattatcagcatgaacaagaagaaagctgc
atgcactatcaccatccaaaaccaaagaagtccaaacgatcaaagaagaagaagcgttct
cactctgcctctttgtctcggtcagcatcagcgtcgcggtcgccatccccggcaccgagc
cacggcacttggagctccgacgagggccggaaacccaagaaaactaagaagaagcatcgg
aggcactctcctgctccgaaatcaccgtctcccgaggagggtggcatcacagacgacgaa
gaagtgattcggcacaaaaacaaaaagacgaaacgcagtgcgcccagcagcccggaagag
gaacaggaaccggaaatcgtttacaaacccaagaagaagaaggacaagaaagataaaaaa
gagaggtcgggtgcggcgtggagtgacgccgacctggagtcgcgtcgtgcggcgctgcta
gctcagctgcacgagcacgaggcggactga
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