Bombyx mori (domestic silkworm): 101742618
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Entry
101742618 CDS
T02817
Name
(RefSeq) RNA polymerase-associated protein CTR9 homolog
KO
K15176
RNA polymerase-associated protein CTR9
Organism
bmor
Bombyx mori (domestic silkworm)
Brite
KEGG Orthology (KO) [BR:
bmor00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bmor03021
]
101742618
Transcription machinery [BR:
bmor03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
PAF1 complex
101742618
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_1
TPR_2
TPR_19
TPR_14
TPR_12
TPR_8
TPR_CcmH_CycH
TPR_16
TPR_17
TPR_11
TPR_10
TPR_6
ARM_TT21_5th
TPR_9
TPR_Slam
ARM_TT21_N
TPR_7
Coatomer_E
ARM_TT21_4th
ANAPC3
Fis1_TPR_C
DUF6584
Motif
Other DBs
NCBI-GeneID:
101742618
NCBI-ProteinID:
XP_037875068
UniProt:
A0A8R2R9N9
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All DBs
Position
23:3978046..4001265
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AA seq
1216 aa
AA seq
DB search
MSLEIPLMSTDEVIDLDPEQLPSGDEVLSILQQERSQLNVWINVALAYYKQKKIDDFLKI
LEASRTDANIDYRDFERDQMRALDMLAAYYVQEANKEKSKDKKKELFTKATLLYTMADKI
IMYDQNHLLGRAYFCLLEGDKMEQADAQFNFVLNQSPNNVPSLLGKACIAFNRKDYRGAL
AFYKKALRTNPDSPAALRLGMGHCFMKLNNQEKARMAFERALQLDPQCVGALVGLSILKL
NLQESESNKIAVIMLSKAYAIDPKNPMVLNHLANHFFFKKDYNKVQHLALHAFHNTENEA
MRAESCHHLARAFHAQGDCDKAFQYYYQATQFAPPNFVLPHYGLGQMYIYRGDTENAAQC
FEKILKAQPGNYETMKILGSLYANSPSQSKRDIARQHLKKVTEQFPDDVEAWIELAQILE
QNDLQGSLNAYSTAMKILKEKVNADIPAEILNNVAALHYRLGNLNEAKKYLEEALEREKS
DAEALDAQYYNSIAVTTMYNLARLNEALCMYNKAEKLYKDILKEHPNYIDCYLRLGCMAR
DKGQIYEASDWFKEALKVNTEHPDTWSLLGNLHLAQQEWGPGQKKFERILQNSSTSNDAY
SLIALGNVWLQTLHQPCREKDREKRHQERALTMYKQVLKTDPKNIWAANGIGCVLAHKGC
INEARDIFAQVREATADFPDVWMNIAHIYVEQKQYINAIQMYENCIRKFRMQHDVEWLTW
VARAQGLAGRARCARGALLRARRVAPHDPALQYNTALTLRRRAAAVLKDDRADLALVLRA
VHELQVSHRYFERLSSEGAAEGGAGAAGGGPWGGAAAEARTCADLLSQAQWHVARARRQH
HEELSLRDKQREQREAFRRQQEEERRIREEQQQKSTVEMLQKRQEYKEKTKNALLFTEMP
ESKPRGGGRGRRRDEYISDSPGSGSDRPPEEKREAKQKKRKREGGEGKKGKSRKRREQRG
SGSDSDPPRKKGRKRGEKGIGRRERAKAKAAEEKLSAKQRAKIVSKETISTSESDSDNSR
KSRSRSRSRSKSGSGSPPAAKGRKRIMSASDSDRSRSKSKSRSKSKSRSRSRSGSGKSRS
RSKSRSKSKSRSRSKSRSRSKSRSRSKSASRSKSRSRSKSRSRSKSRSRSKSRSRSRSRS
RSKSRSRSKSPSRSRSRSKSKSRSRSRSKSGSRSGSGSRASRSRSRSGSRSRSGSRNSRP
DTPVSRKSVSASDDEN
NT seq
3651 nt
NT seq
+upstream
nt +downstream
nt
atgtcgctggaaatacctttaatgagcaccgacgaggtgattgacctggatccagaacaa
ttaccttccggcgatgaggtgctcagtattttacaacaagaacgctcacaactcaatgtt
tggattaatgttgcactcgcatattacaaacaaaagaaaatcgatgacttcctcaagatc
ctggaagcatcacgtacagatgccaacattgactatcgggatttcgaaagagatcagatg
cgggctctcgacatgttggccgcatactatgtgcaagaagctaacaaagagaagtcaaaa
gataagaaaaaagaactatttacaaaggcaacattattgtacactatggcggataaaatt
attatgtatgatcagaaccatcttcttggtagagcatatttctgcttattggaaggtgac
aaaatggaacaggctgatgctcagttcaactttgtcctaaatcaatccccaaataatgtg
ccttcattgctcggtaaagcttgcatagctttcaatcgtaaagattacagaggggcactt
gctttttataagaaagcacttagaacaaatccagacagcccagccgctttgagactgggt
atgggacattgttttatgaagctgaataatcaggagaaagccaggatggcctttgaaaga
gctttacaattagatccacaatgtgtaggtgctttagtgggactttccattttaaaatta
aatctgcaggagagtgaatcaaacaaaatagcagttattatgttgtctaaagcctatgct
attgacccaaaaaatcctatggttctaaatcatttggccaatcatttttttttcaaaaag
gactacaacaaagtgcagcatttagctttacatgcctttcacaatactgaaaacgaagcc
atgagagctgagagctgccaccacttggcgagagccttccacgcgcaaggagactgcgat
aaggccttccagtattattatcaagccacacagtttgcgccacctaattttgtacttccc
cattatggactaggacaaatgtatatttacaggggggacacggaaaatgcagcacaatgc
tttgaaaaaatactcaaagctcagcctggtaactacgagacaatgaagatattgggctcg
ttgtacgccaattcgccgtcgcaatcaaaacgtgacatcgctcggcagcacttgaagaag
gtcacggaacagtttccagacgacgtggaggcttggatagagttggctcaaatattggag
caaaatgatttacagggttccctaaacgcttacagtactgctatgaaaattttaaaggag
aaagtaaacgctgacataccagccgaaatattaaataatgttgcagccctacattacaga
ttaggaaatttgaatgaagcgaaaaaatatcttgaagaagctcttgaaagggagaaatct
gatgcggaggcattagacgcacaatattacaattcaatagcagtgacgacaatgtacaac
ctggcgaggttgaacgaagctttgtgcatgtacaacaaagctgagaaactttataaagac
atactgaaggagcatccaaactatattgattgttatttaaggttaggatgtatggctcgc
gataaaggtcagatatatgaagcttcagattggttcaaagaagctctgaaagtgaacaca
gaacatcctgacacatggtcgttgttgggaaatctccatttggctcaacaagagtggggt
cctggacaaaagaagtttgaaaggattttacagaactcttcaacttccaacgatgcttat
tctctcattgctcttggaaacgtgtggcttcaaacccttcatcagccatgtcgtgagaag
gacagggaaaaaagacatcaagaacgcgccctaacgatgtacaagcaagttttgaaaacc
gatccgaagaacatctgggctgcaaacggaatcggttgtgtgttggctcataagggctgt
ataaacgaagcacgcgacatattcgcacaggtgcgcgaagcgacggcggactttcccgac
gtatggatgaatattgcacatatttacgttgaacaaaaacaatacattaacgccatacag
atgtacgagaactgcatccgcaagttccgcatgcagcacgacgtggagtggctgacgtgg
gtggcgcgcgcgcaggggctggcggggcgggcgcggtgcgcgcggggggcgctgctgcgg
gcgcgccgcgtggcgccgcacgaccccgcgctgcagtacaacacggcgctcacactgcgc
cgccgcgccgccgccgtgctcaaggacgaccgcgccgacctcgcgctcgtgctgcgcgcc
gtgcacgagctgcaggtctcgcacagatacttcgagcggttatcatcagagggcgcggca
gagggcggcgcgggcgcggcggggggcggcccgtggggcggggcggcggcggaggcgcgc
acgtgcgcggacctactgtcgcaggcgcagtggcacgtcgcacgtgcgcgcagacaacac
cacgaggagctgtcgctgcgggacaagcaacgggaacagcgagaggccttccgcaggcaa
caggaagaggagcggcggattcgcgaagaacaacaacagaagagcaccgtcgagatgctc
cagaagcgacaggagtacaaggagaagacgaaaaacgcgctgctgttcaccgagatgccg
gagagcaagccccggggcggggggagagggaggaggagagacgagtacatatcggactcg
cctggaagtgggagcgatcgtccgcctgaagaaaaacgcgaggccaaacagaagaagcgt
aaacgcgaaggcggcgaagggaagaaaggcaagtcgaggaagcgcagggagcagcgcggc
tccggcagcgacagcgacccgcccaggaagaagggcaggaaacggggtgaaaagggcatc
ggtcgccgggaacgcgccaaagcgaaagctgcggaagagaagctcagcgcgaagcaacgc
gcaaagatcgtttccaaggagaccatatccacctcggaatccgactcggataattcgaga
aagtcgcgtagccgcagtcgaagtcgcagcaagagcggcagcgggagtccgcccgccgcc
aagggaaggaagaggatcatgtcggcctccgatagcgacagatccagatcaaagtcgaag
agtcgttccaagtccaagtctcgcagccgctcgcggtccggctccgggaagagccgctcc
aggtccaagagccgatccaagtctaaatctcgttccaggtcaaagagcagatctcgttcg
aaaagccgttcgaggtcgaagagcgcctccaggtcgaagagtcgatccagatccaagagt
cgatccagatccaagagtcgctccagatccaagagtcgatccagatccaggagtcgctcc
agatctaagagtcgttctaggtctaagagtccctctagatcacgatccaggtcaaagagc
aaatctcgatcccgttctcgttcgaagagcggttcccggagcggatccgggtcacgagcg
tcgcgctcgcggtctcgctccgggtcaaggtcgcgatccgggtcaaggaactcgagaccc
gacacgcccgtctcaaggaagtccgtatcggctagcgatgacgaaaattag
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