Bombyx mori (domestic silkworm): 101742768
Help
Entry
101742768 CDS
T02817
Name
(RefSeq) protein HBS1
KO
K14416
elongation factor 1 alpha-like protein
Organism
bmor
Bombyx mori (domestic silkworm)
Pathway
bmor03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
bmor00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
101742768
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bmor03019
]
101742768
Messenger RNA biogenesis [BR:
bmor03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
101742768
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
HBS1_N
GTP_EFTU_D2
MMR_HSR1
AAA_22
Motif
Other DBs
NCBI-GeneID:
101742768
NCBI-ProteinID:
XP_004923000
UniProt:
A0A8R2AR78
LinkDB
All DBs
Position
15:12891631..12894157
Genome browser
AA seq
671 aa
AA seq
DB search
MARHRNIRNRSYSDDYDDDDFYGHSVEEDSCLSPSDASQWIYDRSRNQQVISNLLDRHSN
IQEEAEDEVQDVQVPGPQRRESTDLCSLKLDAEGETRLMSCLDELRNILGDTVSENTMIQ
SVLKHNFDYNKALDDILNSDKSKNKDSSTSKPVKPVITNTVKTTTALVAPKVIATSVDQK
SAVIKGFKVDQEPKPNSRPQTPRGQSPHPEKSKTEQNDDMKNLKVKENKIDAKKQYANER
GSDKDHLYIVVIGHVDAGKSTLMGRLLCELGEVSQKTLHKYEQESKKIGKQSFMYAWVLD
ETGEERVRGITMDIGRAQIETKTKRVIILDAPGHADFIPNMITGAGQADVAMLVVDATRG
EFESGFDFGGQTREHALLVRSLGVSQLAVAINKLDTANWSQDRFNEITNKLKVFLKQAGF
KDTDVTYVPCSGLIGENLVKPASEPELTKWYKGPCLLDVIDKFNVPERPVSKPLRISIND
VFKGTGSGFCVSGRIENGVLKKGDKVLVCPTKEMAEVRSLSINDLTNNVAFAGDQVTLTL
SGVDMQNVSVGYILSDPIEQVSVTTRFEARIVVFNVKVPITKGFPVLVHYQSLVESANIV
KLKALLSKSTGELIKKKPRCLGNNSVAVVEIETSRPICIERYKDVKELGRVMLRVAGVTI
AAGLVTDIIST
NT seq
2016 nt
NT seq
+upstream
nt +downstream
nt
atggctcgacatcgtaacattcggaacagaagttactctgatgactatgatgacgatgat
ttttatggacattcagtggaagaggatagttgtttatctccaagtgatgcgtcgcaatgg
atctacgaccgatcacgaaaccaacaggtgatatctaaccttctcgatagacacagcaat
atccaggaggaagccgaagatgaagttcaagatgttcaagtaccgggcccacaacgaaga
gagtctaccgacctctgcagcctcaagcttgacgcggaaggtgaaaccaggctcatgtct
tgcttagatgaacttcggaatattttaggtgatacagtatcggaaaatacaatgattcag
agtgtgcttaaacataattttgattacaacaaagctttagacgatatacttaatagtgat
aagagtaaaaataaagattcatccacatctaaaccagttaagcctgttattactaataca
gtgaaaaccacaacagcattagtagctcctaaagttatagctacaagtgtagatcagaag
agtgctgtaatcaagggttttaaagtggaccaagagccaaagcctaatagtcgccctcag
acacctagagggcagtctcctcacccagaaaaaagcaagactgaacaaaatgatgacatg
aaaaatttaaaagtaaaagagaacaaaattgatgcaaaaaaacaatatgccaatgagaga
ggttctgacaaagatcatttgtacattgtcgtgataggtcatgttgatgcaggaaaatct
acattaatgggcagattattatgtgagctcggagaagtcagtcaaaaaactttgcacaaa
tatgaacaggagagtaaaaagattggaaagcaaagctttatgtatgcctgggtgcttgat
gaaacaggagaggaaagagtccgaggaatcactatggatattgggcgtgcccagattgaa
acaaagacaaagagggttataatattagatgcaccggggcatgctgattttatccctaat
atgataactggtgctggtcaagctgatgttgctatgttggtagttgatgcaactagggga
gagtttgaatccggatttgatttcggtggtcaaacaagagaacatgcattactagtgagg
tcacttggtgtaagtcagctggctgttgccattaacaaactggatacagccaactggtct
caagacagatttaatgaaatcaccaataaacttaaggtttttttgaaacaagcaggattc
aaagatacagatgtcacctatgtgccttgttcaggactcattggtgagaatcttgtgaaa
ccagcaagcgaacctgaattaactaaatggtacaaaggaccctgtcttttagatgtgatt
gacaaattcaatgttccagagaggcctgtgtctaagccattacgtatttcaatcaatgat
gtgttcaaaggtaccggttctggattttgtgtttcgggacgcattgaaaacggagttcta
aagaagggcgataaagtattggtttgtccaacaaaagaaatggctgaagttagaagttta
agtataaatgatcttactaataatgtagcatttgctggagaccaagtcacattgactttg
tctggggtggacatgcagaatgtgtcagttggatacatactcagcgatcctattgagcag
gtttctgttacaacacgtttcgaggcccgaatagtagttttcaatgttaaagtaccaata
acaaaaggctttccggtgcttgttcactatcaatcattggtagaatctgctaatattgtc
aagcttaaggcattactcagcaaaagtaccggtgagctaattaaaaagaaacctcgttgc
ttaggaaataattctgtggcagttgttgaaattgagaccagcaggcccatatgcatcgag
agatataaagatgttaaggagcttggtcgtgttatgttacgcgtcgcaggtgtcaccata
gcagcaggccttgtcactgatattatcagcacatga
DBGET
integrated database retrieval system
