Bombyx mori (domestic silkworm): 101742881
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Entry
101742881 CDS
T02817
Name
(RefSeq) ATP-dependent RNA helicase me31b
KO
K12614
ATP-dependent RNA helicase DDX6/DHH1 [EC:
5.6.2.7
]
Organism
bmor
Bombyx mori (domestic silkworm)
Pathway
bmor03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bmor00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
101742881
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bmor03019
]
101742881
03036 Chromosome and associated proteins [BR:
bmor03036
]
101742881
Enzymes [BR:
bmor01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
101742881
Messenger RNA biogenesis [BR:
bmor03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
101742881
mRNA degradation factors
5'-3' decay
Decapping complex
101742881
Chromosome and associated proteins [BR:
bmor03036
]
Eukaryotic type
Gene silencing
piRNA pathway
101742881
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
Motif
Other DBs
NCBI-GeneID:
101742881
NCBI-ProteinID:
XP_037870486
UniProt:
A0A8R2LZM7
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Position
12:10826589..10831669
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AA seq
441 aa
AA seq
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MMTENRISSSNHVGNSISQTKGEVDKSIDDVGWKSKLKIPPKDRRIKTSDVTDTRGNEFE
EFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQVD
PKKDTIQALIVVPTRELALQTSQICIELAKHTDIRVMVTTGGTNLRDDIMRIYQNVQVII
ATPGRMIDLMDKQVAKMDQCRMLVLDEADKLLSQDFKGMLDMVISRLPKERQILLFSATF
PLSVKQFMEKHLKEPYEINLMEELTLKGVTQYYAFVQERQKVHCLNTLFSKLQINQSIIF
CNSTQRVELLAKKITELGYCCYYIHARMAQAHRNRVFHDFRAGLCRNLVCSDLFTRGIDV
QAVNVVINFDFPRMAETYLHRIGRSGRFGHLGIAINLITYDDRFALHRIEQELGTEIKPI
PKVIDPALYVARPEDEDLGDK
NT seq
1326 nt
NT seq
+upstream
nt +downstream
nt
atgatgaccgaaaatagaattagttcaagtaatcacgtcggaaatagtatcagtcaaact
aaaggagaggtcgacaaaagcatcgacgacgttggttggaaatcaaaattaaaaataccc
ccaaaagacagaagaataaagactagtgatgtcacagatactagaggcaatgagtttgaa
gagttttgtttgaagcgagaattgttgatgggtatttttgaaaagggatgggagaagcca
tctcctattcaagaggcctcaattcctattgccctaagtggaaaagatgtacttgcaaga
gctaagaatggaactggtaaaactggtgcttattgtattccagttttggaacaggttgat
cctaaaaaggatactatacaagctttaattgttgtaccaactagagagttggcactccaa
acatcacagatttgtattgaactggcaaaacacacagacattcgtgtaatggttactaca
ggaggcacaaaccttcgagatgatataatgcgtatttatcaaaatgtacaagtgattatt
gccacacctgggcgtatgattgatctcatggataagcaggtggccaaaatggatcaatgc
cggatgttagttcttgatgaagcagacaaacttctttcacaagactttaagggcatgctg
gatatggttatttcaagattacctaaggaacgccaaatcttgctgttttctgcaactttc
cctctgagtgtaaaacaatttatggaaaagcatttgaaagaaccttatgaaataaatctc
atggaagaattaacattgaagggtgtaacacagtactatgcatttgttcaagaaagacaa
aaagtgcattgccttaacacacttttttcaaagttgcaaataaatcagtcaataatattt
tgtaattcaactcaaagggtggagttgttagccaagaagataacagagttaggatattgt
tgctactacatccacgcacgaatggcacaagctcatcgtaatcgtgtgtttcacgacttt
cgtgctgggctctgccgtaacttagtgtgttcagacttgttcactagaggtattgatgtg
caagcagttaatgtcgttatcaattttgattttcctcgaatggcagagacatatcttcat
cgcataggacgctctggacgttttgggcaccttggtattgctataaacttaatcacatat
gatgatcgttttgcactacatcgtatcgaacaagaactgggtactgaaatcaagccaatt
cccaaagtgatagatcctgcgctatatgtagcgcgtccggaagatgaagatctgggcgac
aagtaa
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