Bombyx mori (domestic silkworm): 101742953
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Entry
101742953 CDS
T02817
Name
(RefSeq) pre-mRNA-processing factor 6
KO
K12855
pre-mRNA-processing factor 6
Organism
bmor
Bombyx mori (domestic silkworm)
Pathway
bmor03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
bmor00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
101742953
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
bmor03041
]
101742953
Spliceosome [BR:
bmor03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
101742953
Complex C
U5 SnRNP specific factors
101742953
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRP1_N
TPR_14
HAT_PRP39_N
TPR_19
Suf
HAT_PRP39_C
HAT_Syf1_CNRKL1_N
TPR_17
TPR_16
HAT_Syf1_CNRKL1_C
FAT
TPR_CcmH_CycH
ChAPs
TPR_21
NatA_aux_su
Motif
Other DBs
NCBI-GeneID:
101742953
NCBI-ProteinID:
XP_004931733
UniProt:
A0A8R2ALY3
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Position
3:9936673..9957941
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AA seq
929 aa
AA seq
DB search
MSVPPQAFVNKNKKHFLGIPAPLGYVAGVGRGATGFTTRSDIGPARDANDVSDDRHAPPA
AKRKKTEDEDDDEDLNDSNYDEFSGYSGSLFSKDPYDKDDAEADAIYESIDKRMDEKRKE
YREKRLKEDLERYRQERPKIQQQFSDLKRELKTVSEDEWAAIPEVGDARNRKQRNPRAEK
FTPLPDSVLSRNLGGESSSSIDPGSGLASMMPGVVTPGMLTPSGDLDLRKIGQARNTLMT
VKLSQVSDSVTGQTVVDPKGYLTDLQSMIPTYGGDINDIKKARLLLKSVRETNPNHPPAW
IASARLEEVTGKVQTARNLIMKGCEVNPSSEELWLEAARLQPIDTARAVIAHAARNLPHS
VRIWVKAADLEQEAKAKRRVFRKALEHIPNSVRLWKAAVELENPEDARILLSRAVECCPT
SVELWLALARLESYENARKVLNKARENIPTDRQIWVTAAKLEEAHGNTHMVEKIIDRAIT
SLSANGVEINREHWFKEAIEAEKSGAVSTCQAIIRAVIGHGIEPEDQKHTWMEDAEACAT
EGAFECARAVYGYALSVFPSKKSIWLRAAYLEKQHGTRASLETLLQRAVAHCPKSEVLWL
MGAKSKWLAGDVPAARGILSLAFQANPNSEEIWLAAVKLESENKEYDRARRLLAKARASA
PTPRVMIKSAKLEWALNNLDVAIKLLDEAIKVFGDYAKLHMMKGQIEEQMAKDEDAHNTY
SQGLKKCPTSVPMWILLSRLEEKLKHVTKARSVLEKARLRNPKNAELWLESVRLERRNGS
PEIANAVMAKALQECPSAGRLWADAIFMESRPQRKTKSVDALKKCEHDAHVLLAVSQLFW
TERKLNKCREWFNRTVKIDPDLGDAWAYFYKFELLHGNEQQQEDVKSRCRAAEPHHGEYW
CKVSKDIVNWCFSTDQILLLVAKNLPVPS
NT seq
2790 nt
NT seq
+upstream
nt +downstream
nt
atgtctgtaccaccacaagcatttgtaaacaaaaacaaaaagcatttcttaggcattccc
gcaccgctaggttatgtcgctggtgtaggaagaggagctactggtttcacgactcgatct
gatattggtcctgcaagagacgctaacgatgtgtctgatgatcgtcatgcaccaccagct
gcaaaacgtaagaaaacagaagacgaagatgatgatgaagacttaaatgattctaactat
gatgagttctcaggatatagtggatctctgttttctaaggatccttatgacaaagacgat
gcagaggcagatgcaatctatgagtccattgacaagaggatggatgagaagaggaaggag
tatagagaaaaaagacttaaagaagacttggaaagatatcgacaggagaggccaaaaatt
caacagcaattctctgacttgaaacgtgaactaaaaacagtttctgaagatgaatgggcg
gcgatccccgaagtaggcgatgctcgtaataggaaacagcgcaaccctcgcgccgagaag
tttacgccgttaccagacagcgtcttgtctaggaacttgggtggagaatcgtcgtcttca
atcgatccagggtcaggactagcgtctatgatgcctggtgttgtgactccagggatgttg
acaccatcaggtgaccttgatttaagaaagatcggtcaagccagaaatacgcttatgaca
gtaaaactctcacaagtgtcagactctgtgacaggtcaaacggtagttgaccccaaaggc
tatctgacggatttacagtcaatgataccaacttatggtggtgatattaatgacatcaag
aaagctagactgttattgaaatctgtacgtgagacaaatcctaatcatccacccgcttgg
attgcgagtgctcgactagaggaagtaacaggtaaagtacagacagcacgtaatctcata
atgaagggatgtgaagtcaatccgagcagtgaagagctatggctagaggcagctcgcttg
caaccaatagacacggctcgtgcggtcatagctcacgctgcgaggaacctgcctcacagt
gtcaggatttgggtcaaagcggctgacttagaacaagaggcaaaggcgaaacgtcgtgtg
ttccgcaaagccttagagcacattccgaattcggtgcgtctgtggaaggcggccgtcgaa
ctcgagaatccggaagacgcccggatcctgctgtctcgcgccgtggagtgctgtcccacc
agcgtcgagctgtggctggctctggcgagactggagagctacgagaacgcaaggaaggtg
ctgaacaaggcaagagagaacatccctacagaccgacagatctgggtcacggcggctaaa
ctcgaagaagcgcacggcaacactcacatggtagaaaaaattattgatcgtgcgataacg
tcgctgagcgccaacggggttgagatcaaccgcgaacattggtttaaagaagccatagaa
gctgaaaagtctggagctgtttcaacttgccaggcaatcattcgtgcggtcatcggtcac
ggaattgaacccgaagatcagaagcacacttggatggaagacgctgaagcttgcgccact
gagggtgcgttcgagtgcgcccgcgccgtgtacgggtacgcgctgtccgtgttcccgtcc
aagaagtccatctggcttcgcgccgcctacctggagaagcagcacgggactcgcgccagc
ctcgagacgctgctgcagcgggccgtcgcgcactgccccaagtcggaggtgctgtggctc
atgggcgccaagtccaagtggctcgcaggcgacgtaccggcggctcggggtatcctgtcg
ctggccttccaggccaatcccaactctgaagagatctggttggccgccgtcaaactggag
agcgagaacaaagagtacgacagagcgagacggctgctggctaaagctagggcttcagct
cccacaccgagagtgatgatcaaatcagcgaaactagaatgggcattgaacaatctggac
gtagccataaagttactggacgaagcgatcaaagtgttcggggactacgcaaagcttcac
atgatgaagggacagattgaggaacaaatggccaaggacgaagacgctcacaacacatat
agtcaagggttgaaaaaatgtccaacgagcgtccccatgtggatcttgctgtcgagactg
gaagaaaaactgaaacacgtgaccaaagcgaggtccgtgctggagaaagccaggctccgg
aatcctaaaaatgccgaactgtggttagaaagtgtgcgattggaaagacgaaacggaagc
ccggaaatagctaatgccgttatggcgaaagctcttcaagagtgcccatctgccggtcga
ctgtgggcggatgctatcttcatggaatcgagaccgcagaggaagactaaaagtgttgat
gcgttgaagaaatgcgaacacgacgcccacgtgctgctggctgtctcacagttgttctgg
acggagaggaaactaaacaaatgcagggaatggttcaataggacggtaaaaatcgatccc
gacttgggggacgcttgggcgtatttctataaattcgagttacttcacggcaacgaacag
caacaggaggacgtgaagtcgcgttgtcgggccgccgagccgcaccacggcgagtactgg
tgcaaggtttctaaggacatcgttaactggtgtttcagcaccgatcagatactgcttctc
gtcgctaaaaacctgccagttccttcttaa
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