KEGG   Bombyx mori (domestic silkworm): 101742953
Entry
101742953         CDS       T02817                                 
Name
(RefSeq) pre-mRNA-processing factor 6
  KO
K12855  pre-mRNA-processing factor 6
Organism
bmor  Bombyx mori (domestic silkworm)
Pathway
bmor03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:bmor00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    101742953
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:bmor03041]
    101742953
Spliceosome [BR:bmor03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   U5 snRNP specific factors
    101742953
 Complex C
   U5 SnRNP specific factors
    101742953
SSDB
Motif
Pfam: PRP1_N TPR_14 HAT_PRP39_N TPR_19 Suf HAT_PRP39_C HAT_Syf1_CNRKL1_N TPR_17 TPR_16 HAT_Syf1_CNRKL1_C FAT TPR_CcmH_CycH ChAPs TPR_21 NatA_aux_su
Other DBs
NCBI-GeneID: 101742953
NCBI-ProteinID: XP_004931733
UniProt: A0A8R2ALY3
LinkDB
Position
3:9936673..9957941
AA seq 929 aa
MSVPPQAFVNKNKKHFLGIPAPLGYVAGVGRGATGFTTRSDIGPARDANDVSDDRHAPPA
AKRKKTEDEDDDEDLNDSNYDEFSGYSGSLFSKDPYDKDDAEADAIYESIDKRMDEKRKE
YREKRLKEDLERYRQERPKIQQQFSDLKRELKTVSEDEWAAIPEVGDARNRKQRNPRAEK
FTPLPDSVLSRNLGGESSSSIDPGSGLASMMPGVVTPGMLTPSGDLDLRKIGQARNTLMT
VKLSQVSDSVTGQTVVDPKGYLTDLQSMIPTYGGDINDIKKARLLLKSVRETNPNHPPAW
IASARLEEVTGKVQTARNLIMKGCEVNPSSEELWLEAARLQPIDTARAVIAHAARNLPHS
VRIWVKAADLEQEAKAKRRVFRKALEHIPNSVRLWKAAVELENPEDARILLSRAVECCPT
SVELWLALARLESYENARKVLNKARENIPTDRQIWVTAAKLEEAHGNTHMVEKIIDRAIT
SLSANGVEINREHWFKEAIEAEKSGAVSTCQAIIRAVIGHGIEPEDQKHTWMEDAEACAT
EGAFECARAVYGYALSVFPSKKSIWLRAAYLEKQHGTRASLETLLQRAVAHCPKSEVLWL
MGAKSKWLAGDVPAARGILSLAFQANPNSEEIWLAAVKLESENKEYDRARRLLAKARASA
PTPRVMIKSAKLEWALNNLDVAIKLLDEAIKVFGDYAKLHMMKGQIEEQMAKDEDAHNTY
SQGLKKCPTSVPMWILLSRLEEKLKHVTKARSVLEKARLRNPKNAELWLESVRLERRNGS
PEIANAVMAKALQECPSAGRLWADAIFMESRPQRKTKSVDALKKCEHDAHVLLAVSQLFW
TERKLNKCREWFNRTVKIDPDLGDAWAYFYKFELLHGNEQQQEDVKSRCRAAEPHHGEYW
CKVSKDIVNWCFSTDQILLLVAKNLPVPS
NT seq 2790 nt   +upstreamnt  +downstreamnt
atgtctgtaccaccacaagcatttgtaaacaaaaacaaaaagcatttcttaggcattccc
gcaccgctaggttatgtcgctggtgtaggaagaggagctactggtttcacgactcgatct
gatattggtcctgcaagagacgctaacgatgtgtctgatgatcgtcatgcaccaccagct
gcaaaacgtaagaaaacagaagacgaagatgatgatgaagacttaaatgattctaactat
gatgagttctcaggatatagtggatctctgttttctaaggatccttatgacaaagacgat
gcagaggcagatgcaatctatgagtccattgacaagaggatggatgagaagaggaaggag
tatagagaaaaaagacttaaagaagacttggaaagatatcgacaggagaggccaaaaatt
caacagcaattctctgacttgaaacgtgaactaaaaacagtttctgaagatgaatgggcg
gcgatccccgaagtaggcgatgctcgtaataggaaacagcgcaaccctcgcgccgagaag
tttacgccgttaccagacagcgtcttgtctaggaacttgggtggagaatcgtcgtcttca
atcgatccagggtcaggactagcgtctatgatgcctggtgttgtgactccagggatgttg
acaccatcaggtgaccttgatttaagaaagatcggtcaagccagaaatacgcttatgaca
gtaaaactctcacaagtgtcagactctgtgacaggtcaaacggtagttgaccccaaaggc
tatctgacggatttacagtcaatgataccaacttatggtggtgatattaatgacatcaag
aaagctagactgttattgaaatctgtacgtgagacaaatcctaatcatccacccgcttgg
attgcgagtgctcgactagaggaagtaacaggtaaagtacagacagcacgtaatctcata
atgaagggatgtgaagtcaatccgagcagtgaagagctatggctagaggcagctcgcttg
caaccaatagacacggctcgtgcggtcatagctcacgctgcgaggaacctgcctcacagt
gtcaggatttgggtcaaagcggctgacttagaacaagaggcaaaggcgaaacgtcgtgtg
ttccgcaaagccttagagcacattccgaattcggtgcgtctgtggaaggcggccgtcgaa
ctcgagaatccggaagacgcccggatcctgctgtctcgcgccgtggagtgctgtcccacc
agcgtcgagctgtggctggctctggcgagactggagagctacgagaacgcaaggaaggtg
ctgaacaaggcaagagagaacatccctacagaccgacagatctgggtcacggcggctaaa
ctcgaagaagcgcacggcaacactcacatggtagaaaaaattattgatcgtgcgataacg
tcgctgagcgccaacggggttgagatcaaccgcgaacattggtttaaagaagccatagaa
gctgaaaagtctggagctgtttcaacttgccaggcaatcattcgtgcggtcatcggtcac
ggaattgaacccgaagatcagaagcacacttggatggaagacgctgaagcttgcgccact
gagggtgcgttcgagtgcgcccgcgccgtgtacgggtacgcgctgtccgtgttcccgtcc
aagaagtccatctggcttcgcgccgcctacctggagaagcagcacgggactcgcgccagc
ctcgagacgctgctgcagcgggccgtcgcgcactgccccaagtcggaggtgctgtggctc
atgggcgccaagtccaagtggctcgcaggcgacgtaccggcggctcggggtatcctgtcg
ctggccttccaggccaatcccaactctgaagagatctggttggccgccgtcaaactggag
agcgagaacaaagagtacgacagagcgagacggctgctggctaaagctagggcttcagct
cccacaccgagagtgatgatcaaatcagcgaaactagaatgggcattgaacaatctggac
gtagccataaagttactggacgaagcgatcaaagtgttcggggactacgcaaagcttcac
atgatgaagggacagattgaggaacaaatggccaaggacgaagacgctcacaacacatat
agtcaagggttgaaaaaatgtccaacgagcgtccccatgtggatcttgctgtcgagactg
gaagaaaaactgaaacacgtgaccaaagcgaggtccgtgctggagaaagccaggctccgg
aatcctaaaaatgccgaactgtggttagaaagtgtgcgattggaaagacgaaacggaagc
ccggaaatagctaatgccgttatggcgaaagctcttcaagagtgcccatctgccggtcga
ctgtgggcggatgctatcttcatggaatcgagaccgcagaggaagactaaaagtgttgat
gcgttgaagaaatgcgaacacgacgcccacgtgctgctggctgtctcacagttgttctgg
acggagaggaaactaaacaaatgcagggaatggttcaataggacggtaaaaatcgatccc
gacttgggggacgcttgggcgtatttctataaattcgagttacttcacggcaacgaacag
caacaggaggacgtgaagtcgcgttgtcgggccgccgagccgcaccacggcgagtactgg
tgcaaggtttctaaggacatcgttaactggtgtttcagcaccgatcagatactgcttctc
gtcgctaaaaacctgccagttccttcttaa

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