Bombyx mori (domestic silkworm): 101743378
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Entry
101743378 CDS
T02817
Name
(RefSeq) DNA mismatch repair protein Msh2 isoform X1
KO
K08735
DNA mismatch repair protein MSH2
Organism
bmor
Bombyx mori (domestic silkworm)
Pathway
bmor03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
bmor00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
101743378
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bmor03400
]
101743378
DNA repair and recombination proteins [BR:
bmor03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
101743378
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_IV
MutS_I
MutS_II
AAA_27
Motif
Other DBs
NCBI-GeneID:
101743378
NCBI-ProteinID:
XP_004932637
UniProt:
A0A8R1WRF2
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Position
23:complement(8329928..8361494)
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AA seq
916 aa
AA seq
DB search
MSSLQPIHALNLDSVQQQAFVNFFNSLPDKPPTTVRVFDRNDYYSIHGIDATTAAREVFS
SVANIKRMGVEPNRLDYLVLSKGNFEILIKKLLLVRRYRVEIYVADGSIKGCDWSLKYKG
SPGYLTQLEEVLGEGLGGSDENTPCLMAVNIKTDPVSKGKLLGVACVVAADYQMSVSEFT
DDDLLTQLETITVQTAPSECLIPFSDNDDYKALKKVMDRTNVTVTKLKRVDFSTEGLVQD
LNRLLNFKEDQQQDANAFPETRKDLAMTSLAATIKYSALLNESTNFGRFRLSTIRTDCFL
HLDAAALTALNILPELGDNSNSPSRSLFGLLDRCRTQHGKRLLAQWLRQPLRDINLINER
LDVVELLMNNSQLRLQLHEDHLRRIPDLQALTRRLARKKANLHDCYKIYQAIKRLPSLLQ
CLTEAENTTVHSSLTEPISELNDDLDKFQQMIEATLDMGAVERGDFLVKPSFDEQLQSLN
EQLERLQSSAERELGKAARDLGLDAGKTIKLENNTQNGFCFRITLKEERNLRGDKKYKII
DAVKSGVRFRTNTLESINEEYTQAKTDYEKEQDKVVKEIVSIAGGYSECLFCLSHILSRL
DVLVSFAVAASSAPYPYCRPVVTESIDELILKDVRHPCLEVQEGVSYIPNDVEFKRGSVM
LHIVTGANMGGKSTWMRSVGASAVLAQAGCPVPAAAARLPRLAALCARIGAADCERRGLS
TFMTEMIECAAILKTATPNSLVLIDELGRGTSTYEGCGIAWAIAEQLANECKCFCLFATH
YHELTRLASIHPNVIVNSHAAASVVDGQLVLLHKILPGPAARSLGLHVARLADLPDSIIE
YAEAKQAELETNLYEVEAAMESNETAEGQKLIKEFLKKCKEIQASASSDDKMMQEIKLLK
QELLTCDNKYVQTLIL
NT seq
2751 nt
NT seq
+upstream
nt +downstream
nt
atgtcttctttacaacctatacatgccttgaacttagattctgtgcaacagcaggcgttt
gtgaatttttttaattctcttcctgacaagccaccgacgaccgtgcgtgtatttgaccgc
aatgactactacagcattcacggtattgacgcgaccactgcagcccgggaggtcttttcg
tccgtggccaacataaaacgtatgggagtggaacctaaccgcctcgattacttagtactt
tcaaagggaaactttgaaattctcattaagaaactgttattggtgagacgttacagagtc
gaaatatacgttgccgatggatcaataaaaggctgcgattggtcactcaagtacaaaggc
tcaccgggatatctgacgcaattagaagaagtgcttggcgaaggtttaggcggttcggac
gagaacacgccatgcttgatggcggttaatataaaaaccgacccggtttcaaagggtaag
ctcctgggagtggcttgcgtcgtcgctgctgactatcaaatgtcggtctcagaattcacc
gacgacgatctgctgacacaacttgaaacaataaccgtccaaacggcgccttcggaatgt
cttataccgttctctgataatgatgactacaaagctttgaagaaagtaatggatcgcacc
aacgtgaccgtaacgaaactgaagagagtcgacttctcgaccgaaggtctcgtgcaggac
ctgaacagattgttaaacttcaaggaagatcaacagcaggacgctaacgccttcccggag
acgaggaaagacttggccatgactagtttagcggccacgataaagtacagtgctttacta
aacgaaagtacgaacttcggcagatttcgtctgtccacaatacgaacggactgcttccta
cacttggacgcggcggcgctgacggctctcaacatactaccggagctgggcgacaattcg
aactcgccttctagaagcttgttcggtttactggacaggtgtcggactcagcacggcaaa
aggttgctggctcaatggctgcgacagccgctccgcgacattaacctaatcaacgagcgg
ctagacgttgtggaactgctcatgaacaactcccagctgaggcttcaattgcacgaggac
cacttgcggcgcataccggacctacaggccctgaccagacgactggccagaaagaaagct
aatttacatgactgctataagatatatcaggcaatcaagaggttaccgtctttgttacaa
tgtctgactgaagcagaaaatacgacagtgcattcgtcactcactgagcccatctcggag
ctgaacgatgacctcgacaagttccagcaaatgatagaagctacacttgacatgggtgct
gtagaaagaggcgatttcctagttaagccctccttcgacgaacaactgcagagtctgaac
gaacaactggaacgtttgcagtcgtctgcggagagggagctggggaaggccgcgagggac
ttgggactcgatgcaggcaaaactattaaactagaaaataatacgcagaatggattttgt
ttcaggattactctgaaagaagaacgaaatttacgaggcgataagaaatataaaataatc
gacgccgtcaaaagcggtgttagattcagaacgaatacattggaatcaattaatgaagag
tacacgcaagccaagaccgactacgagaaagaacaagataaagtcgttaaagaaatcgtc
agtatagctggtggatattcagaatgtttgttctgtctatctcacatactgtcgcgtcta
gacgtcttggtgtctttcgctgttgccgcttcatcagctccgtacccgtactgcaggccc
gtggtcacggagtccatcgacgaactcatcctgaaggatgtgaggcatccgtgtctggag
gtgcaggagggcgtgtcctatataccaaacgacgtagaatttaaaagaggctcggtgatg
ctgcacatagtgaccggcgcgaacatgggcggcaagtcgacgtggatgcggtcggtgggc
gcgagcgcggtgctggcgcaggcgggctgccccgtgcccgccgccgccgcgcgcctgccc
cgcctcgccgcgctgtgcgcccgcatcggcgccgcggactgcgagcgcaggggactcagc
accttcatgacggagatgatcgagtgtgccgccatccttaagacggcgacaccgaactct
ttggtactaattgacgagctgggacggggtacgtctacgtatgaaggctgcggcatagcg
tgggctatagcggaacaattagcgaacgagtgcaaatgtttctgtttgttcgcgacccat
tatcacgagttgacgcgtttggcgagcattcacccgaacgtgatagtgaactcgcacgcg
gcagcttcggttgtcgatggacagctggtactgctgcacaagatccttccggggccggcc
gcgcgctcactcggcttgcacgtcgccaggctcgccgacctcccggattcgattatcgag
tatgcagaagcgaaacaagcggagctagaaacgaatttatacgaagttgaagcggctatg
gaatcgaatgaaacagcagagggtcagaagcttattaaagaattcttgaaaaaatgcaaa
gaaattcaagcatctgccagtagtgatgataaaatgatgcaagagatcaagcttttaaaa
caagaattgttaacttgtgacaacaaatatgtccaaactctaatattgtga
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