Bombyx mori (domestic silkworm): 101743633
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Entry
101743633 CDS
T02817
Name
(RefSeq) probable ATP-dependent RNA helicase spindle-E
KO
K18408
ATP-dependent RNA helicase TDRD9 [EC:
5.6.2.5
]
Organism
bmor
Bombyx mori (domestic silkworm)
Brite
KEGG Orthology (KO) [BR:
bmor00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
bmor03036
]
101743633
Enzymes [BR:
bmor01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.5 RNA 5'-3' helicase
101743633
Chromosome and associated proteins [BR:
bmor03036
]
Eukaryotic type
Gene silencing
piRNA pathway
101743633
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Helicase_C
DEAD
HA2_C
TUDOR
HA2_N
Herpes_ori_bp
ResIII
AAA_19
AAA_11
AAA_23
ATPase
Motif
Other DBs
NCBI-GeneID:
101743633
NCBI-ProteinID:
XP_012544435
LinkDB
All DBs
Position
25:6689198..6710765
Genome browser
AA seq
1443 aa
AA seq
DB search
MDELKAFFNSPCPSSNQVTKLRGPLTGGFRIPKEDTMNDMNRKEAHRHMVVPSGTDYARE
VKDRETELYLKNEIERKQYESMSAGLESLEQLSLIGASVQNIGELNDEAMTEVYSKYSFQ
KKEDANNLAINSYKQQILDRIRGFPVVIIEGPTGCGKTTQVPQWLLDDCYHNRRPCKIIV
TQPRRIAAISITRRVAQERGWDVGGLVGYQVGLDNRTSTDTRIHYVTTGVLLQKLVSAKT
MNEYTHVILDEVHERGQEMDFLLLVVKKLLYTMSPAVKVVLMSATFNSKAFADYFMIPTP
RGLQMSTCIKVEKREHMFTVKTFYLNHLNKFGSVLQNSMPKNGEPGINPEMHHLVIKLLN
AFEQIDKQEDNYMDRSEADLPSVLIFLPGINEIEDLYSSLTDHDLRTKVADLECANYKWW
VLPLHSTITADEQVRVFQRAPLGHRKIILSTNIAESSITVPDIKYVVDFCLMKVLEADAI
TNFTSLKLCWASKTNCEQRAGRAGRVRDGRVYRLVTDKFYDSLRDECPPEIVRCPLERLA
LLAKMLDMGPPSDILALAMDPPDMSNIHRTVLVLKEIGALKKTLDNEWSSSDGDLTYMGR
IMAKLPIDVRASKLIVLGYVYGCLDECVIMAAAMSVKNVFNSPFRERLNAYNSKLTWADG
STSDCIALLNVYKVWNHLRQQQQFKQQGSEVQWSRRFFVQVRALRELDDMVRELRLRLSR
EGLESEGNASPWARNELPLALKVIMAGAFYPQYFIQVSQDEEREREALRTLSGFDPRNTV
YLRNFPDHQPGEVYASLIKKVVKQQIGDEPCVSFDKNGRKVFLTFNDGSYLSRSEKENSG
DPTIPGQVALPVYKCIKARQLRLDIRIPLLPLEKANALASAMQINNKDISMERTVPRLPE
IDDTHFPLKITHEVNVGKFWVQYDDESTAAELRLIQYALNHGPLLTHTGDVSADEIYAAP
YADASGTVMCRVRVLKLLPMDMVEVAYMDYGGTGRVSTCNLHALPAGASRTCPPLGVPCA
LAGVAPARRLHDRPAWSPQAYSCFRELISRPRLIAKVYSVVHGVVAIELLTDGGHVSVNE
ILIKKGFAVPCEESYESKLNHDLRQTANELNLAQKRAYNKEQTEAAFYQLGDAAPPNYRE
CVADVCLKGPYSPLESSLHNLMYSSRDKPVQIDSSSVNSVLLDTEPQITYERLLVAAEVG
QNESFSKLTLRLSTLMPNIPALPAIIALLFCPTAELRRDSSATRYVSALCGLGAAPDAAP
RFPEHDLLVNIDADLDVEDIGWINHNRYLTDYMLYCGEGQDMPTADDEFRPQIPGIIRKN
LMQLIKKRRKLRPTEAVPTAWEWKSVPEDELMEITVPDMVERAVLYELHVPLELHPVSRD
HLLALKRDNDQLKLLVSRTPISSSAELSCKLCGTGPMPPHAMRLHLYSNIHKEKEEDFQM
FQT
NT seq
4332 nt
NT seq
+upstream
nt +downstream
nt
atggatgaattaaaagcattcttcaattccccatgtccatcgagtaatcaagttacaaaa
ttgcgcggtcccctaacaggtggttttcgtattcccaaagaagatacaatgaacgatatg
aatagaaaagaggcacatcggcatatggtggtgcctagtggtacggattacgctcgagaa
gtgaaagatcgagaaacagaactgtatttaaagaatgaaattgagcggaaacaatatgaa
agcatgtcggccggcttggagtctttggagcaactctcattaattggtgcgtcggtacag
aacattggggagctcaatgatgaagcaatgacagaagtgtatagtaaatattctttccaa
aagaaagaagatgctaataatctagcaatcaattcatataaacaacagatattagatcga
attagaggcttcccagttgtcatcattgaaggtccaacaggttgcggcaaaacaactcag
gtcccacaatggttattagatgattgttaccataaccgaagaccgtgtaaaattattgtg
acacagccaaggaggattgcagctatatctataacaaggcgagttgctcaggagaggggc
tgggatgttgggggattagttggatatcaggtcggcctagacaatcggacatcaacagac
actcgtatacattatgttaccacaggagttctgcttcagaaactagtttctgccaaaaca
atgaatgaatacacccatgttattcttgatgaagttcacgaaagaggacaagagatggat
tttctactcttagttgtgaaaaaacttttatacaccatgtccccagctgtaaaagttgtc
ctgatgtcagctacatttaatagtaaagcttttgctgattatttcatgataccaacgcct
cgtggactgcagatgtcaacttgcatcaaagtcgagaagagggaacatatgttcactgtc
aaaacattttatctgaatcatttaaataagtttggttcggttcttcaaaactcaatgcca
aaaaatggagaacccggaataaatccagaaatgcatcacctagtcatcaaactgttgaac
gcatttgagcaaattgacaagcaagaagacaattatatggacagatcagaagctgacttg
ccgtctgtgttaatatttttgcccggtatcaatgagattgaagatttgtattccagtctt
actgatcatgatttaaggacaaaagtagcagatttggaatgcgcaaactacaaatggtgg
gtgcttcctctgcactctaccatcacagctgatgaacaagtacgtgtgttccaacgcgcg
ccgctcgggcaccgcaagatcattctttccactaacatcgccgaaagctccatcactgta
cccgacatcaaatatgtggtggacttctgtctaatgaaagtattagaagcagacgcgatc
acaaacttcacatcactgaagttatgttgggcctcgaagacaaactgcgagcagcgggcc
ggtcgcgcgggccgcgtgcgtgacggacgcgtatatcgcttagtcacagataagttttac
gatagcctgagagatgaatgtcctcctgagatagtgcggtgtccactagaaaggctagca
ttacttgctaagatgctggatatgggtccgcccagtgatatcctggcgttggccatggac
ccacctgatatgtctaacatacatcgaactgtacttgtattaaaagaaattggagcttta
aaaaagactttagacaacgagtggagttcctcggatggtgacctcacttatatggggcgt
attatggcaaaattgcccattgatgtacgagcatctaagctgatagtgctcggctatgtc
tacggatgtctggacgagtgtgtcataatggccgctgcaatgtctgtgaaaaacgtgttc
aacagtccgttccgtgagcgtctaaatgcgtacaactctaagttgacttgggcggacggc
tcaaccagtgactgtattgctctactcaatgtctataaggtgtggaaccacttgagacag
cagcagcagttcaagcagcaaggcagcgaggtgcagtggtcgcgccggttcttcgtgcag
gtccgagcgctgcgggagctcgacgacatggtccgcgagctgcggctgcggctgtcccga
gagggattggaatcggagggaaacgcatcgccctgggccaggaacgaactccctctcgct
ttgaaggtaataatggcgggcgcattctacccacaatacttcatacaagtgtcacaagac
gaagaacgagaacgtgaggctttgcggacgctcagcgggttcgaccccaggaacacggtt
tatttgaggaactttccggatcaccagcccggggaggtgtatgcgtctctcatcaaaaaa
gtagtaaaacaacaaataggagacgaaccctgcgtctcatttgataaaaacgggagaaag
gtgttcttgaccttcaatgacgggagctacctgtcgagaagtgaaaaagaaaatagtggc
gatccaacgattcccggtcaagtggcactacctgtttacaaatgtatcaaagctcgacaa
cttcggttggatatcaggatacctttactgcccctggaaaaagcaaatgctttggcaagc
gcaatgcaaataaacaacaaggatatcagcatggaaaggacagtgccgcgccttccggag
atcgatgacactcatttcccactcaaaattacccacgaggtgaacgttgggaagttttgg
gtgcaatatgacgatgaatcaaccgcagccgaactccgccttatccagtacgcgctgaac
cacgggcccctgctgacccacactggggacgtgtccgcggacgagatatacgccgccccc
tacgcggacgcctcggggaccgtcatgtgccgagtgcgggtgcttaaattgttgcccatg
gacatggtcgaggtggcgtacatggactacggcggcacggggcgcgtgagcacgtgcaac
ctgcacgcgctgccggcgggcgcgagccgcacgtgcccgccgctgggcgtgccgtgcgcg
ctggccggtgtagcgcccgcgcggcgcctgcacgaccggcccgcctggtcgccgcaggcc
tacagctgcttccgggagctcatctcgcgtccgcgtcttatagccaaggtttattctgta
gtacatggcgtcgtagctatcgaactgctcacagatggcggccatgtaagcgttaatgaa
atactaattaaaaaaggatttgctgttccgtgtgaagagagttacgaatctaagctgaac
catgacctgagacagactgcgaacgaactgaacctcgcgcagaagcgagcttataacaag
gagcagacggaagccgcgttctaccagctaggggacgcggcgccgcctaattacagggaa
tgtgttgcggatgtttgcctcaaaggaccctacagcccgctggagtcgtcgttgcacaac
ttgatgtactcgagccgcgacaagcccgtgcagatcgacagcagctccgtcaactcggtc
ctgctcgacaccgagccccagattacgtacgaaaggttgctggtcgcggcagaggtcgga
cagaatgagagctttagcaagctgaccctgcgactctcgacgttgatgccgaacattccg
gctctgcccgccatcatcgcgctgctgttctgtcccacggcggagctccgacgggacagc
tcggccacccgctacgtgagcgcgctgtgcgggctgggggccgcgcccgacgccgcgccg
cgcttccccgagcacgacctgctcgtcaacatcgacgccgacctcgacgtcgaggacatc
ggatggataaatcacaatcgttacctgacggactacatgctgtactgcggcgaggggcag
gacatgccgactgcggatgatgaattccgacctcagattcccggcatcattcgaaagaat
ctcatgcagttgataaagaaacgtcgcaagctccgcccgaccgaggcggtgccgaccgcg
tgggagtggaagagcgtgcccgaggacgagctcatggagatcaccgtgcccgacatggtg
gagcgcgccgtgctgtacgagctgcacgtgccgctagagctgcaccccgtctcgcgcgac
cacctgctggcactcaagcgggacaacgaccaactcaagctgctcgtcagcaggactccg
atatcgtcaagcgccgaattgtcgtgtaagctgtgcggcaccggaccgatgccgcctcac
gccatgaggctgcatctctactccaacattcacaaagaaaaggaagaagattttcagatg
ttccaaacataa
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