Bombyx mori (domestic silkworm): 101744801
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Entry
101744801 CDS
T02817
Name
(RefSeq) nonsense-mediated mRNA decay factor SMG9
KO
K18735
protein SMG9
Organism
bmor
Bombyx mori (domestic silkworm)
Brite
KEGG Orthology (KO) [BR:
bmor00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bmor03019
]
101744801
Messenger RNA biogenesis [BR:
bmor03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Other surveillance factors
101744801
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
GBP
Dynamin_N
AAA_18
RsgA_GTPase
MMR_HSR1
Calpain_u2
KAP_NTPase
Roc
Ras
NB-ARC
nSTAND3
AAA_14
AAA_29
MeaB
Torsin
AAA_28
Motif
Other DBs
NCBI-GeneID:
101744801
NCBI-ProteinID:
XP_037873055
UniProt:
A0A8R2M2K3
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All DBs
Position
18:6419304..6426930
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AA seq
481 aa
AA seq
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MADKKKKPFLPKEPTTPRRPVILKSERDNSNKEATKEKEKEKQPTIILKTREQSTPKDEI
PQSPKISKTSNLEAEGPHPSKIVQNENKEKKTIEQKVSPPLKPMLEPVKLLDKHFVFNSG
ALEFLHDSSTNYLVVGIIGTQGVGKSTILNLIAQNKFDQNLCSEILNSHEAPEGVYETNV
MANIENQSDNLDLIQPQEPKIDKNTLSKFKIQDIEQIERGVHCTKGIDMYITNDRVILLD
CQALWSPSLIEDSMPPIKSKSSNEITVECLQIASFLMAICHVLIAVQDWFTDYNFIRYIQ
TAEMLKPSLSASNTISNQEGSESTAIGENQPHLLLLHNRCQLEDYTPESIKIMQDLYRKA
FQKSSLQLNSGMYMYSDTNRNGLNVDSVCKSYNVETCGSPINMFLLPEVYEDYDNVDIYR
GHPPFEQLAKRLRWMVLGVNKHQITNVPNLSERGWLQYCSKAWETIRKCTFFMEYERFLP
Y
NT seq
1446 nt
NT seq
+upstream
nt +downstream
nt
atggccgataaaaagaaaaaacctttcctacccaaggagcccacaactccaagacggcca
gtaattttaaaatcagaacgtgataattcaaataaagaggcaacaaaagagaaagaaaaa
gaaaaacaacccaccataattttaaaaactcgggaacaaagtactcccaaagatgaaata
cctcaaagccctaaaatttctaaaacatcaaaccttgaagcggaagggcctcatccatct
aaaatagttcagaatgaaaataaagagaaaaagacgatagaacaaaaagttagtcctccc
ttaaaaccaatgctggagccagtgaaactattagacaaacattttgtatttaattcagga
gccttggagttcctgcatgactcaagtacaaactatttagttgttggaatcataggaact
caaggtgttggtaaatcaacaatactcaatctgatagcacaaaacaaatttgaccaaaac
ctatgtagtgaaattctaaattcccatgaggcaccagagggtgtatatgaaacaaatgta
atggctaatattgaaaatcaatcagataatcttgatttaatacagccacaagaaccgaaa
atcgataagaatacactttcaaagtttaaaatacaagatattgaacaaattgaaagaggc
gttcactgtaccaaaggtatcgatatgtacataacaaacgatcgtgttatccttctggat
tgtcaagctctttggtcaccatctttaatagaagacagcatgcctcctataaaatcgaaa
agctctaatgaaatcacagtagaatgtcttcagatagcttcattcctaatggctatatgt
catgtgcttattgcagtccaggattggtttacagattataattttattagatacattcaa
acagcggagatgttaaagccttcactatcggcttcaaatactatttcgaaccaagaaggt
tcagaatcgacggccattggtgagaaccagccccacttgctgcttctacataacagatgt
cagctagaagattatacacccgaatccattaaaattatgcaagatctttacagaaaggcg
ttccaaaagtcgtcactgcagctaaactctggaatgtacatgtacagcgatacgaatcga
aacggattgaatgtagatagcgtatgcaagagctacaacgtggaaacgtgcggttcaccc
ataaatatgttcctactgcccgaagtatacgaggattatgataacgtagacatttatcgc
gggcatccacctttcgagcaactcgcaaaacgactgcgctggatggtgctcggagtcaac
aagcatcagatcacaaacgttcccaacttatcggaacgaggatggctccagtactgcagc
aaagcttgggaaacaataagaaagtgcactttcttcatggaatacgagaggttcttaccg
tattaa
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