Bombyx mori (domestic silkworm): 101744893
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Entry
101744893 CDS
T02817
Name
(RefSeq) SR-related and CTD-associated factor 4 isoform X1
KO
K13191
RNA-binding protein 16
Organism
bmor
Bombyx mori (domestic silkworm)
Brite
KEGG Orthology (KO) [BR:
bmor00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bmor03021
]
101744893
03041 Spliceosome [BR:
bmor03041
]
101744893
Transcription machinery [BR:
bmor03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
101744893
Spliceosome [BR:
bmor03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
101744893
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CID
RRM_1
RRM_occluded
Motif
Other DBs
NCBI-GeneID:
101744893
NCBI-ProteinID:
XP_021203205
UniProt:
A0A8R2DK07
LinkDB
All DBs
Position
23:1584343..1608153
Genome browser
AA seq
1438 aa
AA seq
DB search
MDMAEVKAFNAELSGLYDNKPPISKAKMSAITKGAIKAIKFYKHVVHSVEKFIQKCKPEY
KVPGLYVIDSIVRQSRHQFGQDKDVFAPRFAKNMQQTFANLFRCPAEDKRNIIRVLNLWQ
KNNVFSPQVIQPLLDMADPNHPLHQEIQQNNNANGSSLNLSHNTSDKLSPIPAQHTPRSA
SPMGDQFQDEPSGQPGVKFNRKLLNDFEYESEDEPPSDPPPQSTQSSHSTHSGHTGHSQY
NTNSAPSNQNQTQNPADALGSILTNPEIMRQLQSLQAQMQMMTGMQIPNFMPMMSEMQMQ
QNQGQNLFMNSQLEQQKQTETKDDVANESDIEFVDTGPQVIEITDANDSRSPSPRGRRHR
SRSPRRRRRSRSPRRRRDRDRDKDREKEREKQNKEREAEKEKQREREKKGLPPIKKEHLS
VCSTTLWVGHLSKLATAEELSDLFGAIGGVTSIDVVAPRGCAFVVMERRRDAARALQRLH
KHKLHCKEITVAWAPGRGVKGREWRDYWEAELGASYLPWGALHERWTHAALALHALEDGG
HVDEDTLPPWLPPRILPKTMMEMPMMPVMPPVSGAPGMMPPAMPNMAAMPPMASMPSMPA
LPPTPLPNIPPEFLAGAMSLGGANPLSVPVPRGPPPGLGTTMPPGMTPAMPPGMRPPGLP
SGVPGLPSGAPGLQSDAGMASAGQLLRLPPQSLGQPAMVGGFLGGLLGVGGMLPGVLPMP
MPSLHHMHQQQQQQQQQQQQQQQQQQQHQPQQQQNETSEAEDAMELDTEESHADAEPHAP
PSMLLPDQIQALLSKPPPNFNASEPPPTFNASKPPPFSINQPPPSEDKLDDDKKSDKDRD
KKDKERDRDRRDRDRDRRDRDRRERDRGGRDRDRERDDRRDRDRDRGRDRRDRDRDRERD
RDRQPSRDNSDRIKEKSPRALSGENEKSLQERLWEMANGKPNGAADDKRDSGAEERPPPA
DRPDAAPHADHPEHREHSEHTTDAEPPRGWSAVPPRAAPPGPHGPLGPHLAPPFRAELRM
RGPPRQPMPGHWMDGPGPFGPRFNGMGPPFNRPPFERPPFEGGPPMFDGPPRFERPPFNR
MPFDMNRPPFDGSRPPFDGPRPPFDGPRPPFDGSRPPFDGPRMPFDGTRPPFDGPRPPFD
CSRPPFDGPRPPFDGSRPPFDDSRSYDGPPFDGDRSFEGPPEYRNNRRFDDREQYNERGW
NGERERGDREWERKNEWDDRRRERRGPPREHDERQRDRNHDRRRQHEERRPPPPRDDLPS
APTPAPPPRRDKDRKSRWGAPDDTAAPDLPQPLDQTEQPQPDEPLLDLDNIVMPPSQEES
LDTDAPDDVENGDESNLEPAEQHEPGSDAELDAEHDAEHDADTQHSGGTEPEDHNEPPSE
SASTLYDANDAVDTSFAAAVPEQDEDSKPSTAEPAAEHSDAADIFSEESKEESRQSAA
NT seq
4317 nt
NT seq
+upstream
nt +downstream
nt
atggacatggcggaagtgaaagcgttcaacgcggagttatccgggttgtacgacaacaag
ccgcctatatcgaaggcgaagatgagtgctatcactaaaggtgctataaaggccataaag
ttttataaacacgtcgtgcacagtgttgaaaagtttatacagaaatgcaaacctgagtac
aaagttcctggcttatatgtgatcgattcaatagtgcgacaatctagacatcagtttgga
caagataaagacgtctttgctccaaggttcgcgaagaacatgcagcagacgtttgccaat
ttgtttcgatgccctgctgaagataagcgtaacataatccgagttctcaatctatggcag
aagaataatgtgtttagtcctcaagttattcaaccattactagacatggctgaccccaac
catccacttcatcaagaaatacaacagaataataatgctaatggcagcagtttaaactta
agtcacaatacatctgacaaactatcaccaatacctgctcaacacacaccaagatctgca
tctcctatgggtgatcagttccaggatgagccatctgggcagcccggtgtgaaattcaat
aggaaattgctcaatgactttgagtatgaaagtgaagatgaacctccatctgatcctcct
cctcagtcaactcagtcgtctcattccacacactcaggtcatactggacattctcaatac
aatactaacagtgctccttcaaatcagaatcaaactcagaatcctgctgatgctcttggg
agtatacttacaaatccagagattatgagacaactacagagtctgcaagcccagatgcag
atgatgactgggatgcaaatacctaattttatgcccatgatgtctgaaatgcaaatgcaa
caaaatcaaggacaaaatttatttatgaattctcaactggagcaacagaaacaaacagag
acaaaagatgatgtcgccaatgaatcggacatagagtttgtcgacactggaccgcaggtg
attgagataactgatgctaatgactccaggagcccgtccccgcgcgggcgccgccaccgc
tcccgctccccgcgacgccgccgccgctcgcgctcgccgcgccgccgtcgcgacagggat
agagacaaagacagagaaaaggaaagagagaagcagaacaaagaaagagaggcagagaaa
gagaaacaaagagaaagggaaaagaaaggactcccaccaatcaaaaaagaacatctcagt
gtgtgcagtacgactctatgggtgggacatctgtccaagctggcgacggccgaggagctg
tccgacctgttcggcgccatcgggggcgtcacctccatcgacgtggtggctccgcggggc
tgcgccttcgtcgtcatggagaggcgccgcgacgccgcccgcgccctgcagcgcctgcac
aagcacaagctgcactgcaaggagatcaccgtggcctgggcgcccggacggggggtcaaa
gggcgcgagtggcgcgactactgggaggcggagctgggcgcgtcgtacctgccgtggggc
gcgctgcacgagcgctggacgcacgccgcgctggcgctgcacgcgctcgaggacggcgga
cacgtggacgaggacacgctgccgccctggctgccgcccaggatccttcccaaaacgatg
atggagatgccaatgatgcccgtgatgccgccggtgtcgggggcgcccggcatgatgccg
cccgccatgcccaacatggccgcgatgccccccatggccagcatgcccagcatgcccgcg
ctgccgcccacgccccttcccaacatacctccagaattccttgcaggagcgatgtccctg
ggaggagccaacccgctgtccgtccccgtgcccagaggaccgccccccgggctaggaaca
acaatgcccccgggtatgactccggcaatgccaccgggcatgagacccccggggctaccg
tccggagtaccgggtctaccgtctggggcaccaggactgcagagcgacgcgggcatggcg
tcggcggggcagctgctgcgcctgccgccgcagagcctgggacagcccgccatggtgggc
ggcttcctgggcggcctgctgggcgtgggcggcatgctccccggggtgctgccgatgccc
atgccgtctctgcaccacatgcaccagcagcagcaacagcaacaacagcagcaacagcag
cagcaacaacaacagcagcagcaccagccgcaacagcagcagaacgagacgagtgaggcg
gaggacgccatggagctggacacggaggagagccacgcggacgcggagccgcacgcgccg
ccctccatgctgctgcccgaccagatccaagcgctgctctcgaagcctcctccgaacttc
aacgcgtccgagcccccgccgaccttcaacgcatcaaagcccccgcccttcagcatcaac
cagcccccgccctcggaagataaactggacgacgacaagaagagcgacaaggacagagac
aagaaggacaaggagagggacagggataggagagatcgagaccgcgacaggcgggaccgg
gacaggagggagagggacagggggggtcgggacagagacagggaacgtgatgacagaaga
gatcgcgacagagacaggggaagagacaggagggacagagatagagatcgcgagagagac
agagacagacaaccgtcacgagataacagcgatcgaataaaggagaaatcgcctcgagcc
ctgagcggcgagaacgagaagtcgttacaagagaggctgtgggagatggccaacggcaag
cccaacggagccgccgacgataagcgagactccggcgccgaggagcggcccccgcccgcc
gaccgacccgacgccgcgccgcacgccgaccaccctgagcaccgtgagcacagtgagcac
actacggacgcggagcccccccgcggctggagcgccgtgcccccgcgcgccgcgcccccc
ggcccccacgggcccctcggaccacacctcgcccctcccttccgagccgaattgagaatg
aggggaccaccaaggcagccgatgccaggacactggatggacggaccaggacctttcggt
cccaggttcaacggcatgggaccacccttcaatcgacctccgtttgaaagacctcctttc
gaggggggccctccgatgtttgacggcccgccccgttttgaacgtcccccatttaatcga
atgcctttcgatatgaatcgtccaccgttcgacggttcccgtcctccctttgacgggccc
aggccgcctttcgacggaccgagaccgccattcgatggttccaggccgcccttcgacgga
ccgagaatgcctttcgacggaactaggcctccgtttgatgggcccaggccgccattcgac
tgttctcgaccgccgtttgatggcccaaggcccccctttgatggctcccgtcccccgttt
gacgattcgcgatcatatgacggaccaccgtttgatggcgacagatctttcgaaggaccc
ccagagtacagaaacaatagaagattcgacgacagagaacagtacaacgaaagaggttgg
aacggggaaagggagagaggagaccgcgagtgggagcggaagaacgagtgggacgacagg
agacgggagcggcgcgggccccccagggagcacgacgagcgccagcgggaccgcaaccac
gaccgcaggaggcagcacgaggagcgccgcccgccgccgcccagggacgacctgccctcc
gcgcccacgcccgccccgccccccaggagggacaaggacaggaagtcgcgctggggggcg
cccgacgacaccgcggcccccgacctgccgcaaccgctcgaccaaaccgagcagccacag
ccggatgaacctctactcgacctcgacaacatagtcatgcctcccagccaggaggagagc
ctcgacaccgacgcgcctgacgacgtcgagaacggagacgagtctaaccttgaacctgcg
gaacagcacgagcccggcagcgacgccgagctcgacgcggagcacgacgccgagcacgac
gccgacacgcaacactcgggcgggaccgagcccgaggaccacaacgagccacccagtgag
agcgcgtcgaccctctacgacgctaacgacgccgtggacaccagcttcgctgccgccgtc
ccggagcaggacgaggactccaaaccctccactgcggagccggcggcggagcacagcgac
gcggcggacatattcagtgaggagtccaaggaagagagcaggcagtcggcggcctga
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