KEGG   Bombyx mori (domestic silkworm): 101745139
Entry
101745139         CDS       T02817                                 
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB9
  KO
K03017  DNA-directed RNA polymerase II subunit RPB9
Organism
bmor  Bombyx mori (domestic silkworm)
Pathway
bmor03020  RNA polymerase
bmor03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:bmor00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    101745139
  09124 Replication and repair
   03420 Nucleotide excision repair
    101745139
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:bmor03021]
    101745139
   03400 DNA repair and recombination proteins [BR:bmor03400]
    101745139
Transcription machinery [BR:bmor03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol II specific subunits
     101745139
DNA repair and recombination proteins [BR:bmor03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      101745139
SSDB
Motif
Pfam: Zn_ribbon_TFIIS Zn_ribbon_RPB9 Zn_ribbon_recom Zn_Ribbon_TF Zn_ribbon_IS1595 RIM2a_ZnF DUF7351 Zn_ribbon_GRF_2 HVO_0758 DZR TRASH_HVO_1752_C
Other DBs
NCBI-GeneID: 101745139
NCBI-ProteinID: XP_004928659
UniProt: A0A8R1WLL3
LinkDB
Position
15:complement(1816229..1816882)
AA seq 127 aa
MSAISLSRKDGGPGYVGIQFCQECNNMLYPREDKNNKVLLYACRNCDYKQLADSNCVYVN
KIMHEVDELTHINPDVVSDPTLPRTKDHMCPKCNHREAVFFQGQTRRAEEEMRLYYVCTS
CKHRWTE
NT seq 384 nt   +upstreamnt  +downstreamnt
atgagtgctataagcttaagtagaaaagacggcggtcctggttatgtcggcatacaattt
tgtcaagaatgtaacaatatgctttacccgcgcgaagataaaaataacaaagttttgctg
tacgcgtgcagaaattgtgattataaacaacttgcggattcaaattgcgtttacgtcaac
aaaattatgcacgaggtagacgaattgacgcatataaaccctgatgtagtaagcgacccg
actttacctagaaccaaggatcacatgtgcccaaagtgtaatcacagagaagcagtattc
tttcaaggccagacgagacgcgccgaagaagaaatgagattgtattatgtgtgtacaagt
tgtaaacatagatggacagagtag

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