Bombyx mori (domestic silkworm): 101745770
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Entry
101745770 CDS
T02817
Name
(RefSeq) probable nucleoporin Nup54 isoform X1
KO
K14308
nuclear pore complex protein Nup54
Organism
bmor
Bombyx mori (domestic silkworm)
Pathway
bmor03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
bmor00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
101745770
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bmor03019
]
101745770
Messenger RNA biogenesis [BR:
bmor03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
101745770
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nup54
Nup54_C
Motif
Other DBs
NCBI-GeneID:
101745770
NCBI-ProteinID:
XP_004928577
UniProt:
A0A8R1WIT6
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Position
15:5994377..6014137
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AA seq
566 aa
AA seq
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MAFSFGNTTTTQGSVFGAAAKPTFSFGGTSTATTTSTGFNFGTTTTSSGFGSFGTSSATP
FGGLGNTATTTTTNSLFGGTGFGAAKPATGFGTTGFGTNTFGTGLFGTGSNTFASAAPTF
GTNTLGSSNLNTGAFGTGTFGSGFGTKPSTGFGGFGLGTNQFGQQQQQQLQQQQQQQQAP
ATAHEALVAAVFNCCVFGDERDQVLAKWNLIQAQWGTGQAYYSRNHPPLTLTEQNPLCRF
KAVGYSKLCEKEDKDGHVAMIFNKSEQEIKNNQQGLITSLQGLLGNKPNLAVNVDSVKAV
ADDKSQVVIYVVDKAANNSHVSASELANFLNAGNAKNALSSAGCSAVSAVTAPTPQMLQQ
YLQTPPPGMDIRLWKQAQADKPDSANYIPVPIIGFSEIKFRAQCQAEQGRLQASWLRRAE
DTLCELRTRRAAAAARLARLSAALHALRHTLLQIVARQEAVGRVGAALSPEEEATRARLH
ELASQLAAPPLSNGRLNELLCAVRLQRSASAGMAHERYQLDPGAQEDVKQFLTLQQKGMA
HLLDTARKDLAALNTIAEGMSQLVRT
NT seq
1701 nt
NT seq
+upstream
nt +downstream
nt
atggctttttcatttggtaataccactactacacaaggttcggtttttggtgctgccgcc
aaaccgacattttcatttggtggaacaagtactgctacaaccaccagtactgggtttaat
tttggtactacgacaacctcatcgggctttggctcctttgggaccagtagtgcaacacct
tttggtggtttgggtaacactgctactacaacaactactaattcattgttcggagggact
ggatttggagctgccaaacctgccactggttttggaacaactggctttgggacgaacaca
tttgggactggtttatttggaactggatccaatacatttgcgagtgcagcaccaacattt
ggtacaaacactctaggttccagcaatctgaatacaggagctttcggtaccggaactttt
ggcagtggatttggtacaaaaccgtcaactggtttcggtggatttggtcttggcactaat
caatttggacaacaacagcaacaacaactacaacagcagcaacagcaacagcaagcgcca
gcgacagcccacgaggcgttagtcgcggccgtgttcaactgctgtgtgttcggcgacgaa
agggatcaagttttagcgaagtggaatttgattcaagctcaatggggtacaggtcaagcg
tactatagtcgaaaccatccgcctttgacgttgacagagcaaaatccgctctgtcgtttt
aaagcagttggctactcaaagctctgtgagaaggaagataaggatggacatgttgctatg
atttttaacaaaagcgaacaagaaattaagaataaccaacaaggtttaattacatcacta
caaggcttactagggaacaaaccgaacttagctgtcaatgttgattctgtcaaagccgtg
gcagatgacaaaagtcaggtggtaatatacgtggtggataaggccgcgaacaattctcac
gtttctgcgtcagagctagcgaatttcttaaacgccggcaacgctaagaacgccctgagc
agcgccggctgttctgccgtgagcgccgtcaccgcaccgacgccgcagatgctgcagcag
taccttcaaactcctccaccaggcatggatataagattatggaaacaagctcaagccgac
aaaccggactctgctaattacattccagtgccaattattggattctcagagataaagttc
cgagcgcagtgccaggcggagcagggccggctgcaggcgagctggctgcgtcgcgcggag
gacacgctgtgcgagctgcgcacgcgccgcgccgccgccgccgcccgcctggcgcgcctc
tccgccgctctgcacgcgctgcgacatacgctcctgcagattgtcgcgcgtcaagaagcc
gtcggtcgtgttggtgcagctcttagtcccgaagaggaagcgacccgagctcgactgcac
gaactcgcttcacaattagcagcgcctccactttcaaatgggcgtttgaacgagttgctg
tgcgcagtgcgtttgcaacgtagcgccagtgcgggaatggcgcatgaacgatatcaatta
gacccaggtgcacaagaagacgtgaagcagttcttgaccctgcaacagaagggcatggcg
catctattggacacggcgaggaaggaccttgccgcactcaacaccatcgccgaagggatg
tcgcaacttgttcgaacttag
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