Bombyx mori (domestic silkworm): 101745815
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Entry
101745815 CDS
T02817
Name
(RefSeq) general transcription factor IIH subunit 4 isoform X3
KO
K03144
transcription initiation factor TFIIH subunit 4
Organism
bmor
Bombyx mori (domestic silkworm)
Pathway
bmor03022
Basal transcription factors
bmor03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
bmor00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
101745815
09124 Replication and repair
03420 Nucleotide excision repair
101745815
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bmor03021
]
101745815
03400 DNA repair and recombination proteins [BR:
bmor03400
]
101745815
Transcription machinery [BR:
bmor03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
101745815
DNA repair and recombination proteins [BR:
bmor03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
101745815
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Tfb2
Tfb2_C
Helicase_C_3
Motif
Other DBs
NCBI-GeneID:
101745815
NCBI-ProteinID:
XP_004926208
UniProt:
A0A8R1WMI9
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Position
19:complement(211020..222815)
Genome browser
AA seq
475 aa
AA seq
DB search
MSESSKSKSLNLNPSPTLQCKDLHEYLKSRSPQFLETLYNYPTICLAVYRELPELARHFV
IRLLFVEQPVPQAVVTSWVSQTYAKEQAKACTTLSELSVWQEAPIPGGMPGWMLAQSFKK
NLKVSLLGGGRAWSMSSSLEPDGKARDVSFLDAYALERWECVLHYMVGSAQTEGISADAV
RILLHAGLMTRDAEDGSAVITRAGFQFLLLSTPKQVWLFLQHYLHTAERRSLSAAECLAF
LYQLSFSTLGKDYSTEGMSNNMLVFLQHLREFGLVYQRKRKAGRFYPTRLALNILRVRCA
APLEAAAGARGHLVLETNYRVYGYTSSDLQVALLGLFTELIYRFPNVVVGVVSRESVRQA
LRGGITAEQIIHYLEQHAHPQMLKSETGGIRSASMLPPTVVDQIRLWESERNRCVYTEGV
VYNQFLSQADFVVLRDHARAAGVLSWQHERARTMVVTRAGHDDVKKFWKRYSKNS
NT seq
1428 nt
NT seq
+upstream
nt +downstream
nt
atgtcagagtcttctaaatcgaagtctttaaatttgaatccttcgcctacactacaatgc
aaagaccttcacgaatatcttaagtcgcggtctccgcagtttctagagactctttacaat
taccccactatatgtctcgctgtatatcgcgaattaccagagctagcacgtcacttcgta
atccgcttgctgttcgttgagcagccagtcccacaggcagttgtcacatcctgggtctcg
caaacatatgccaaagaacaagcaaaagcatgcactacactgtcagagctctccgtgtgg
caggaggcccccataccggggggcatgccgggctggatgctcgcacagtcgtttaaaaag
aacctcaaagtgtcattgcttgggggaggcagggcgtggagcatgtcgtcgtcgctggag
ccggacgggaaggcccgggacgtgtcgttcctggacgcgtacgcgctggagcgctgggag
tgcgtgctgcactacatggtgggcagcgcgcagaccgagggcatcagcgccgacgccgtc
cgcatactgctgcacgccggactcatgaccagagacgcagaagacgggtccgccgttatc
actcgcgccggcttccagtttctgctcctgagtacacccaagcaggtgtggctgttcctg
cagcactacctgcacacggccgagcgccgcagcctcagcgccgccgagtgcctggccttc
ctctaccagctcagcttcagcaccctggggaaggactacagcacggagggcatgagcaac
aacatgctggtgttcctgcagcacctgcgggagttcggcctcgtctaccagaggaagcgc
aaggcgggccgcttctaccccacccgcctcgcgctcaacatcctgcgcgtgcgctgcgcc
gcgccgctcgaggccgccgccggcgcgcgcggacacctcgtgctggagaccaactaccgc
gtgtacggctacacctcctccgacctgcaggtcgcgctgctcggcctcttcacggagctc
atctacaggttccccaacgtggtggtgggcgtggtgagccgggagtccgtccgccaggcg
ctgcgcggtggcatcacggccgagcagatcatccactacctggagcagcacgcgcacccg
cagatgctgaagtcagagacgggcggcatccggtcggcgtcgatgctgccccccaccgtg
gtggaccagatccgcctgtgggagtccgagaggaaccgctgcgtctacacggagggggtc
gtctacaaccagttcctgtcgcaggccgacttcgtggtgctgcgggaccacgcccgcgcg
gccggggtgctgagctggcagcacgagcgcgcgcggaccatggtggtgacccgcgccgga
cacgacgacgtcaagaagttctggaagcgctactccaagaacagctag
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