Bombyx mori (domestic silkworm): 101746229
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Entry
101746229 CDS
T02817
Name
(RefSeq) nuclear pore complex protein Nup98-Nup96 isoform X2
KO
K14297
nuclear pore complex protein Nup98-Nup96
Organism
bmor
Bombyx mori (domestic silkworm)
Pathway
bmor03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
bmor00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
101746229
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bmor03019
]
101746229
03036 Chromosome and associated proteins [BR:
bmor03036
]
101746229
Messenger RNA biogenesis [BR:
bmor03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
101746229
Chromosome and associated proteins [BR:
bmor03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
101746229
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nucleoporin2
Nup96
Nup98_GLEBS
FA_FANCE
TPR_Sec16
Motif
Other DBs
NCBI-GeneID:
101746229
NCBI-ProteinID:
XP_037869821
UniProt:
A0A8R2LZA8
LinkDB
All DBs
Position
11:3516906..3564303
Genome browser
AA seq
1823 aa
AA seq
DB search
MFPKQTFGSNATSGFGSFNSGATTSSPFGGFKPATGSFGASTSTQPATGGGLFANNTSGG
GLFGNPGPSTSTSAFGTSTTGFGFGGGATSGGLFGNTSTAGGGLFGNTQATPSFGVKPTG
FGFSGSTTTGATTGNLFGTPATGPGAGLFAPQGNTMSGGGLFGGNTSAGAFGQQQPTGTG
HVKFNPVVGTEVVMKNGTSQNINIKHHCITFMKEYEGKSLEELRLEDYMAGRKGSTATTG
MFGGFQQTTENKPLFGSTGFGQPATTSAPGMFGTGSGLGTSGAFGQNSTFSFGGNTNTTT
TGLFGANKPPAFGTSTAGSTLFNTTTTQAPAFGASTNTFGFGANTQNQSTGIFGAKPATG
AFGTTPASSGFGSFSGGGAPFAAKTTAPAFGTTTSAFGSMAPTFGSGTQGGGLFGQGTAF
GKPATTQPSFSFAASQPAAPGLGAGAGGVFQGKPAAPSFGTLGLGTFQQQPANTFKTDGV
LGGGMFGNNNALGSGFGLGSMNANNSLLANNSLSGASAGGNVHEQILTMAARPYGDSPLF
KDLLPDSTTAAEDILKPTNPLALKAVLDGSHSAYRINSPTSRVQPRQLPVHKKSLFDGLE
ESDSSLEDKLCLKPSRKRLVLRARPADGQDEGRTNRSFEQPSSGPGRTQDSVDQVDRSAD
VNRNKSTADTEENGDLHPDKHSRWINSPKISDLWTERDHKPDAQRTNRMYPDIEKEVSEH
ISERRASWLSTKPLRAGAARGAAGCAESSVRELGGRSASPERDRLDSLSVSEDENVEPRD
APPHPTGVKLTRPGYYTIPSLDDMINYMRPDGTCPVPHLTIGRKNYGNVYYDSEIDVAGL
DLDALVHFLNKEVIVYPEDSDKPPVGVGLNRRAIVTLDRVWPRDKTEKRLITEPDRLLKL
DYEGKLRRVCEKHDTKFIEYRPQTGSWVFRVEHFSKYGLTDSDEEDDPTPDVLKRQLLTE
SLQKASAPGPKSPVNVSEAGAAVPGLLGPGHPGLGGSGPPGLLSEDSLYNLHHTSLLTLN
GTSKAFDVMDTAEDNAESQSLFLENRAFGVKSPTSELARLENRRSHSVQLMKASLYPDEE
MDDDVSVSTGEQLVPNSAPIFNDQRLPSPSLGTVVGAPPPPPERAPEPPMRPLTVQPHTI
VLKYHRKVPPFKDTIAGRLDSACLADMSVSHARHSRVGFGPASTVALLTTYDAFSDLPRS
SELSSLDRYLSGRASGDWSERLVARLALAADRPQHPLQEILEPHISTLLEWSTLSECAED
ECPRLSLRPEPEARLAVLRDNLRHSSKHDYVVKFGVSAAYCREVWRLCDALWGADLENGG
IPGTDEQSIVNRHKKLLRWFEDAVAGVTDAELAEPRGTELEDESDTHSARIWTLLLGGRT
LEACKLARDSGDLNMAMLLAQAGGDAAYRGLVARQLAQWSACGADTHVAGARLHALRALG
GAAPPALAGAGWLRALHATARYICPQIPSLEKIIRTYEGFFSKDEQVDLTSLGDDVDMRP
PLPDYNEDYCYITSKNGNTKAVLDLRYELIRARAFNQRPKLKPAAYTPDPNDFTLCFLLG
AWFGSPSVESVVSVAEQLEAGGAWQLATAVLAYHPHGAARSSLVRSMISRHAPSSGSAPG
LQLLERIGVPEKWIHLARAHRAKYEHQPALEVEHLLAARQWSAAHRVLLDELLPDAVLND
DLQTVSRLLKTLEEAAERHEVADWESGGLALSHYIHVCDEIMAIQNEGDQWGRLEALRPR
LAAACRALPPPQHMSPRVAAARAQMGGRLLRLTLSANLSADKLASLVAALKLPPDCSACA
SHKITTELAERRLEGNYTALLAP
NT seq
5472 nt
NT seq
+upstream
nt +downstream
nt
atgtttcccaaacagacttttggcagtaatgccacttcaggttttggttccttcaattct
ggcgcgacaacttcgtccccttttggcggattcaaacctgccacaggatcttttggtgcg
agcacgtcaacgcagcccgccactggtggaggtctcttcgcgaacaatacctctggtggt
ggtcttttcgggaatcccggtccctcgacatcgacttccgccttcgggacgagcaccact
ggtttcggcttcggcggaggtgctacgtccggtggactattcgggaatacctcgaccgct
ggagggggtttgttcgggaacacgcaggcgacaccctcgtttggagtcaaaccgacaggt
ttcggcttcagcggctcgaccacgaccggagcgaccaccgggaacctgttcggcacgccg
gcgaccggacccggcgccggactgttcgcgccccagggcaacaccatgtccggcggggga
ctgttcggggggaacaccagcgctggtgctttcggtcagcagcaacccacagggaccggc
catgtcaagttcaacccagttgttgggacggaggtggtgatgaaaaatggcacatcacag
aacattaacatcaaacatcactgcataactttcatgaaggaatacgaaggcaaaagctta
gaggagctacgtttggaagattacatggcagggcgaaagggttcaactgccaccacgggg
atgttcggaggtttccagcagacaacagagaacaaacccttgttcggcagcactggtttc
ggccagccagctaccacgagcgcccccggcatgttcgggacgggatccggcctggggacg
tccggggcattcggacaaaacagtacattctcgtttggcggcaacacgaatacgacgacc
acgggcctcttcggtgcaaacaagccgccggctttcggtaccagcactgcgggctccacc
ctgttcaatacaacgacgacacaagcgccggcgttcggcgccagtactaacacattcggg
tttggcgccaacacgcagaatcagtcaactggtatattcggggcgaagccggcaaccgga
gcgttcggcacgacgccggccagctcgggcttcggttcattctcggggggcggagcaccc
ttcgctgccaagacgacggctccggcgttcggtaccaccacatccgcattcggcagcatg
gcgcctacgttcggcagcggcacgcagggcgggggcctgttcgggcagggcacggccttc
gggaagccggccaccacgcagcccagcttcagcttcgccgcctcgcagcccgccgcgccg
gggctgggggccggggcggggggcgtgttccagggcaagcccgcggcgccgagcttcggc
acgctcgggctcggcacgttccagcagcagcccgccaacacgttcaagacggacggcgtg
ctgggcggcggaatgttcgggaacaacaacgcgctgggctccggcttcggtttgggctcg
atgaacgcgaacaacagtctgctggcgaacaacagcttatccggcgcctctgctggcggc
aacgtgcacgagcagatcctgacgatggcggcccgcccgtacggggactcgcccctcttc
aaggacctgctgcccgattcgacaacggcagccgaagacatactgaagccgacgaacccg
ctggcgctgaaggcggtcctggacggctcccattccgcctacaggatcaactcgcccacc
tcacgggtgcaacccaggcagctgcccgtacataagaagtcgctcttcgacggcctagaa
gaatcggattcgagcttagaagacaagctgtgcttgaagccgagccgcaagcgtctggtg
ctgcgcgcccgccccgccgacggacaagacgagggacgtaccaacagatcattcgagcaa
ccctccagtgggccgggccgcacgcaggactccgtcgaccaagtggacaggtccgccgac
gttaaccgtaacaagtccacggccgacacagaggaaaatggcgatttacatccagacaag
cacagcaggtggatcaactcgccaaagatcagcgatctgtggacggagcgcgaccacaag
cccgacgcgcagcggaccaacaggatgtaccccgacatcgaaaaagaagtgtccgaacat
atatccgagagacgcgccagctggctgagcacgaagccgctgcgtgcgggggcggcgcgc
ggggctgcggggtgcgcggagagctctgtgcgggagctgggggggcggagcgcctcgccg
gagcgagaccggctggactcgctgtccgtatctgaagatgagaatgtggagccgcgcgac
gccccgccccacccgaccggggtcaagctgacgaggccgggctactacaccatcccctcc
ttggacgacatgataaactacatgcggccggacggcacgtgtcctgttccgcacctgacg
atcggacgcaagaactacgggaacgtgtactacgactcggagatcgacgtggccggcctc
gacctggacgccctggtgcacttcctgaacaaggaggtgatagtctatccggaggacagc
gacaagccgccggtcggagtcggcctgaacaggcgggccatcgtgaccctcgaccgggtg
tggccccgggacaagaccgagaaacgactcatcaccgagcccgacagattactaaaactg
gattacgaagggaagctgcgcagggtttgcgagaaacatgacaccaagtttatcgagtat
cgacctcaaacgggcagctgggtgttcagggtggagcatttcagtaagtacggtctcact
gattccgacgaggaggacgaccccactccggacgtcctgaagcggcaactcctcaccgag
tctctacagaaagccagcgcaccaggtcccaagtcgcctgtgaatgtgtcggaggcgggg
gctgcggtcccggggctcttggggcccggacatcccgggctggggggctccggcccgcca
ggcctgctcagcgaggacagcctctacaatctccaccacacttccttactgactctaaac
ggcaccagcaaagccttcgatgttatggacaccgctgaagacaacgcggagtcacaaagc
ctgtttctagaaaacagagcgttcggcgtgaagagtcccacctcggagctggcgcgcctg
gagaatagacgcagccacagcgtgcagctgatgaaggcctcgctgtaccctgatgaagaa
atggacgatgacgtgtcagtgtcgacgggagaacagctggtgccgaactcggctccgata
tttaacgatcaacggttaccgtcgccctcgctggggaccgtcgtgggggccccgcccccg
ccgccggagcgcgcgcccgaaccaccaatgcgaccgctcactgtccaaccccatacgata
gtattgaaataccacagaaaggttccaccattcaaagacaccattgcgggtcggctggac
agcgcctgcctggccgacatgtcggtgagccacgcgcgccacagccgcgtcggcttcggg
cccgcctccaccgtcgccctcctcaccacgtacgacgccttcagcgacctgcccagatcg
tctgagctctcgtcgttagaccggtacttgagcggcagggccagcggggactggtcggag
cgtctggtggcgcgtctggcgctagccgccgaccggccgcaacacccgctgcaggagatc
ttggagccgcacatctctacgttgctggagtggtccacgctatcggagtgcgcagaggac
gagtgcccgcgcctctccctccgccccgagccggaggcgcgcctggccgtgctcagggac
aatctgagacactcctccaaacacgactacgtagtgaagttcggcgtgtctgccgcgtac
tgccgcgaggtgtggaggctgtgcgacgcgctgtggggagccgatctggagaacggtggc
atccctggcacggacgagcagtcgatagtgaacagacacaagaagctgctgcgttggttc
gaggacgccgtggcgggggtcacggacgcggagctggccgagccccgggggacagagctg
gaggatgagtccgacacgcacagcgctcgaatctggactttgctgctgggcggcaggacg
cttgaggcctgcaagctggccagggacagcggggacctcaacatggccatgctcctcgct
caggccggcggcgatgcggcgtaccgggggctggtggcgcggcagctggcgcagtggagc
gcgtgcggcgccgacacgcacgtggcgggcgcgcgcctgcacgcgctgcgggcgctgggc
ggcgccgccccccccgcgctggcgggcgccggctggctgcgcgcgctgcacgccacggca
agatacatttgcccgcaaattccctcgctcgagaaaattataagaacgtacgagggattc
tttagtaaggacgagcaagtcgatttgacgtcattaggcgatgacgtcgacatgagaccg
cccctgccggattacaatgaagattactgctacatcacgagtaagaatggaaatacgaaa
gcggtgttggatttacgctacgagcttattagagcaagagctttcaatcaacgtccgaaa
cttaagcccgcagcttacactccggatccgaacgattttacactgtgcttcctcctgggc
gcgtggttcggcagtccgtcggtggagagcgtggtgtcggtggcggagcagctggaggcg
ggcggcgcgtggcagctggccaccgccgtgctggcgtaccatccgcacggagccgcccga
tcctcgctggtgaggagcatgatctcgcggcacgcgccgtcctcgggctccgcccccggc
ctccagctgctggagcggatcggggtgcccgagaagtggatccacctggctcgcgcgcac
agggccaagtacgagcaccagccggcgctggaggtggagcatctgttggcagcgcggcag
tggagcgccgcgcaccgcgtgctgctggacgagctgcttcccgacgccgtgctcaacgac
gatctgcaaactgtatcccggctgctgaagacgctggaggaggcggccgagcgacacgag
gtggccgactgggagagcggcgggctcgcgctgtcccactacatacacgtctgtgacgag
ataatggcgatacagaatgaaggcgatcagtggggacggctggaggcgcttcgcccccgc
ctggccgccgcctgtagggcgctgccccctccacaacacatgtcgccgcgtgtggccgcg
gcccgagcgcagatggggggtcgcttgctgcggctgacgctgtccgccaacctgtccgcc
gacaagctggcgtcgctggtggccgccctgaagctgcccccggactgctccgcctgcgcc
agtcacaagataacaacagaactcgccgaacgcagattagaagggaattatacggccctg
cttgcaccttaa
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