Bombyx mori (domestic silkworm): 101746591 Help Entry 101746591         CDS       T02817                                  Name (RefSeq) 5'-3' exoribonuclease 1   KO K12618   5'-3' exoribonuclease 1 [EC:3.1.13.-] Organism bmor  Bombyx mori (domestic silkworm) Pathway bmor03008   Ribosome biogenesis in eukaryotes bmor03018   RNA degradation Brite KEGG Orthology (KO) [BR:bmor00001]  09120 Genetic Information Processing   09122 Translation    03008 Ribosome biogenesis in eukaryotes     101746591   09123 Folding, sorting and degradation    03018 RNA degradation     101746591  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:bmor03019]     101746591    03009 Ribosome biogenesis [BR:bmor03009]     101746591    03016 Transfer RNA biogenesis [BR:bmor03016]     101746591    03036 Chromosome and associated proteins [BR:bmor03036]     101746591 Messenger RNA biogenesis [BR:bmor03019]  Eukaryotic type   mRNA surveillance and transport factors    mRNA cycle factors     Common to processing body (P body) and stress granule      101746591   mRNA degradation factors    5'-3' decay     5' exonucleases      101746591 Ribosome biogenesis [BR:bmor03009]  Eukaryotic type   Pre-60S particles    RNases     101746591 Transfer RNA biogenesis [BR:bmor03016]  Eukaryotic type   tRNA degradation factors    Rapid tRNA decay (RTD) pathway factors     101746591 Chromosome and associated proteins [BR:bmor03036]  Eukaryotic type   Gene silencing    piRNA pathway     101746591 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  XRN_N XRN_M XRN1_D1 XRN1_D2_D3 SH3_12 Motif Other DBs NCBI-GeneID:  101746591 NCBI-ProteinID:  XP_012550791 UniProt:  A0A8R2GCM1 LinkDB All DBs Position 22:complement(3901244..3942445) Genome browser AA seq 1499 aa AA seqDB search MGVPKFFRYTSERYPCLNELVKQYQIPDFDNMYLDMNGIIHNCSHPDDSNPHFRITEEKI FTDVFHYISILFQIVKPKKLFFMAIDGVAPRAKMNQQRGRRFRSAREAENLEAEAKAKGE VLPTEKRFDSNCITPGTVFMARLHEQLKYFVKHKMSTDPLWSKVKVILSGHETPGEGEHK IMDYIRWARSQPDYDPNTRHCLYGLDADLIMLGMCTHEPHFALLREEVKFGRTTQRATTP EETNFYLLHLSLLREYLEQEFIAIKDKLPFPYDIEKIVDDWVLMGFLVGNDFIPNLPNMH VNNDALPLLYNTYMTVLPKLDGYINEAGDLNLERFEIFMQELSKIDKEKFQDTYTDLKYF EEKTGRRPNANERREYKANNNETFNVDVNEIKGNHLDNDLQALINATDNMFMNDLEDGEE EYEETSDEEANMEMEFILHKKDYYMNKLDYSKVTDEVLADQAEGYVRAIQWNLYYYYKGC PSWCWFYPHHYAPYISDIKGFKDLKIDFELGEPFKPFEQLLAVLPAASKHLLPTPFHDLM TDEDSPIVHYYPVHFDTDLNGKINDWEAVVLIPFIDETNLLSAMAPCYQRLTDEEIKRNQ PGPMLVYSWSSTSLGVVDAPQYFPSIKECHAFEKRVWRNELDVPEEQLKKGMLPNARRDM LFPGFPTMRHLKYKSSHKMAKVKVFDLPARNSSVIIELIRDKDEDSLERVANELLGKVIW VGWPHLTRAKVISVSNEKTRLHYVDKQNNNVNGTSLYTTVQNSGNLHKQWLGERNTIIEH NMNRLGIELGDVNIIVHAVNLKGYKYIVQDNCQMVYEPEWCEVPCGYAYQAVVRDVSAHV VQEVNRFSTLQEAYPPGDTVFLLTPGQYYGCLATVVESAQVRSGRIKVSVCESVEPTPVA APAPPYKSSQHAAAACGVTNQMLSCITGCVFVVEGTRDGRSTDKLKKINIGLNLKFNKKN QEVAGYTRRCAVTGAWQYSDRCVQLVKDYAQNFPELFDKLASSSIRDVFFESDLWPGEVG EKKYQDVLQWIKNQPFRRALRRDCGSEALEPEEMKALADNIDKQLEILNANERKITMQVK WNLLYKAELHAGEVSPDRAADYRLYDRVVCVARGLCVPAGARGTVAALLPPPPATSVRLS DRLNAAHTYLVIFDRPFAGALHDDCFEENRLYRMRPNQLLNISYGRKIRQDVRTEQALEP FSYFRPVSLLRKDDGHHSAFASYSPPADKSNGVEMNSPPQDKATHLLRNLLRISEDNPKA NNNLPSESNQSWRIKPDVTPPALPQPPRVQPHGWRKDASSASGGRPGPAPPNNWTNNIGH NNFKNPPPFPPVPTFNQPFPGPSQIPLQSPLQSRQYFNVQQQRPYQQNFPQHLPNVSANN STAALPTQRSHTVPVGPILQNMKSDITNQKSGMHPNPPRTSDKVVNPFVPLQVQTSQRRV SQPSSSQRDANELVTPKAHVATQQQRAGAAANQQNSSADVKPQKKRKQRIAANLPFQED NT seq 4500 nt NT seq  +upstreamnt  +downstreamnt atgggtgtcccaaaatttttccgttataccagtgaaaggtatccttgtctcaatgagctg gtaaaacagtatcagattccagattttgataacatgtatttagacatgaatggaatcatt cacaattgctcgcatcctgatgactccaacccacattttcgtatcactgaagagaagata ttcactgatgtcttccattatattagtattttatttcaaattgtcaagccaaaaaaatta tttttcatggctattgatggagttgcacctagagcgaagatgaaccagcagagaggcaga aggttccggtctgctagagaggcagaaaatttagaagcagaggctaaagcaaaaggggaa gttctgcctacagagaagagattcgacagtaattgcatcaccccaggaactgtcttcatg gcacgcctacatgaacaactcaaatatttcgtaaagcataaaatgtccacagatccactc tggtccaaagttaaggtcatactctcgggacatgagacccctggcgaaggggagcataaa ataatggactatattagatgggcacgctcgcagcccgattatgatcctaatacaagacat tgcctgtatggtcttgatgcagatctcataatgctgggaatgtgcacgcatgaaccacat tttgcacttttgagagaagaggttaaatttggtcgaacaacccaaagggcgacaacccca gaagagacgaacttctatttactacatttatctctgttgagagaatatttggaacaagag tttatcgcgataaaggacaagttgccgttcccttatgatatagagaagattgttgatgac tgggtgctcatgggattcttagtgggaaatgattttatacctaatttaccgaacatgcac gtcaataacgatgcactcccactattgtataatacttacatgaccgtgctgcctaagttg gatggctatataaacgaagctggtgatctgaacttggaaagattcgagatatttatgcaa gaactttctaagatagacaaagaaaaatttcaggacacctacaccgacttaaagtacttc gaagagaaaacgggacgacgacctaacgctaatgaaaggagagagtacaaagctaataac aatgaaacgttcaacgtagatgtaaatgaaataaaaggaaaccatttggacaatgatctg caagcactcataaatgctacagacaatatgtttatgaatgatttggaagatggtgaagaa gaatacgaggaaacgagcgatgaggaagccaacatggaaatggagtttattttgcataaa aaagattattatatgaataagttggactattcgaaagttacagacgaagtgctggcggac caggccgagggctacgtgcgagccatccagtggaacctgtactactactacaagggctgc ccctcgtggtgctggttctatccgcaccactacgccccctacatatccgacattaaggga ttcaaagatctgaagatcgacttcgagctcggggaaccgttcaagcccttcgaacagctg ctagcagtgttgccggccgccagtaagcatctactgccgaccccgtttcacgatttaatg actgatgaagattcgccgatagtacattactatcccgtgcatttcgataccgacctcaac gggaaaatcaacgattgggaggcagtcgtactcataccgttcatagatgagactaattta ctgtcagcgatggctccgtgctaccagcggctgacggacgaagaaattaaaaggaaccag cccggaccgatgctggtctacagctggagctctactagtctaggtgtcgtcgatgctcct cagtacttcccttcgatcaaggagtgtcatgcgttcgagaaacgagtgtggaggaatgaa ctggacgtgcccgaggagcagctgaagaagggaatgttgcccaacgcacgtcgagacatg ctgttcccgggcttccccaccatgagacatctcaaatataagtcgagtcataaaatggca aaagtgaaagttttcgacctgccagctcgaaatagtagcgtaattattgaactgatccga gataaagatgaggattccctggagagggtggcgaacgaactgctcggtaaagttatatgg gttgggtggccgcacctcacgagagctaaagttatctcggtgtcaaatgagaagacgcgc ctgcattatgtcgacaagcagaacaataatgtgaacggtacgtcgctatacaccacggtg cagaacagcggtaacttacacaaacaatggctcggagagaggaacactattattgagcat aacatgaacagactcggcatagagttgggcgatgtcaatattatagtgcacgctgttaat ttgaaaggttacaagtatatcgtccaagacaactgccagatggtgtacgagccggaatgg tgcgaggtgccgtgcgggtacgcctaccaggccgtggtgagggatgtcagcgcgcacgtg gtgcaggaggtcaacaggttcagcacgctgcaggaggcctaccctcccggggacacggtc ttcctgttaacgcccggacagtactacgggtgtctggctaccgtggtcgaatcggcgcag gtccgcagcgggcgcatcaaggtgtcggtgtgcgagagcgtggagcccacgcccgtcgcc gcgcccgcgcccccctacaagagcagccagcacgccgcggccgcgtgcggtgtcactaat cagatgctgtcgtgcatcacgggctgcgtgttcgtcgtggaagggacccgcgacggacgg tcaacagacaaactcaagaaaattaatatcggcctcaatttaaagtttaataaaaagaat caggaagtggccgggtatacgcggcgctgcgcggtgacgggcgcgtggcagtactcggac cgctgcgtgcagctcgtcaaagattacgcccagaatttcccggaactgttcgacaaactc gcgtcgtcgtcgataagagacgttttctttgagagcgatctgtggcccggagaagttgga gagaagaaataccaggacgtattacagtggatcaaaaaccagcctttccgtcgcgcgctt cgaagggattgtggttccgaggccttagaacctgaagagatgaaggccctggctgataac atcgacaagcagctggagatactcaatgccaatgagaggaaaatcacgatgcaggtcaag tggaatctgctttataaggcggagttgcacgcgggcgaggtgtcgccggaccgcgcggcg gactaccggctgtacgaccgcgtggtgtgcgtggcgcgcgggctgtgcgtgccggcgggc gcgcgcggcaccgtggcggcgctgctgcccccgccccccgccacctccgtgcgcctgtcc gaccgcctcaacgccgcgcacacctacctcgtgatcttcgatcggcccttcgcgggcgcc ctgcacgacgactgcttcgaggagaacaggctctacagaatgcgaccgaatcagctactg aacatatcgtacggtcggaagatacgtcaggacgtgcggacggagcaagccctggagccc ttcagctacttccggccggtcagcctgctgcggaaagacgacggacatcactccgctttt gcgagctacagtcctccagcggataagagtaatggtgttgagatgaattcgccaccgcag gataaagcaacacatctactgcgtaacttgttgaggatcagcgaagataacccgaaggct aataacaatctcccgagtgaatctaaccagagctggcgaatcaagccggacgtcactccg ccggccctcccgcagccccccagagtgcagccccacgggtggcgcaaggacgcttccagc gcgagcggcggccgcccgggccccgcgccgcccaacaactggaccaataacatcgggcat aacaattttaagaatccaccgccgttcccaccggtcccgaccttcaaccagcctttccct ggcccctctcaaatcccactccagagtccactgcagtcccgccagtatttcaacgtccag caacagcggccctaccagcaaaactttccccaacatttgcccaacgtttcggccaacaat tctactgccgcattgccaacccagcggtctcatacggtacccgttggccctatactacaa aatatgaaatcggatataaccaatcaaaaatctgggatgcatcccaacccgccgcggacc agcgataaggttgtgaatccattcgtgcctctacaagtacaaaccagccagagaagagtg agtcaaccaagctcgtcccagagagatgctaacgaactggtgacgccgaaggctcacgtc gcgacgcagcagcagcgggcgggtgcggcggcgaaccaacagaactccagtgcagacgtg aagcctcaaaagaagaggaaacaaaggatagcagccaacctcccatttcaagaagattaa

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