Bombyx mori (domestic silkworm): 101746840
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Entry
101746840 CDS
T02817
Name
(RefSeq) DNA-directed RNA polymerase I subunit RPA1
KO
K02999
DNA-directed RNA polymerase I subunit RPA1 [EC:
2.7.7.6
]
Organism
bmor
Bombyx mori (domestic silkworm)
Pathway
bmor03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
bmor00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
101746840
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bmor03021
]
101746840
Enzymes [BR:
bmor01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
101746840
Transcription machinery [BR:
bmor03021
]
Eukaryotic type
RNA polymerase I system
RNA polymerase I
Core subunits
101746840
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_1
RNA_pol_Rpb1_4
DUF6179
SURF2
Motif
Other DBs
NCBI-GeneID:
101746840
NCBI-ProteinID:
XP_004925181
UniProt:
A0A8R2ALD3
LinkDB
All DBs
Position
8:3270358..3278199
Genome browser
AA seq
1660 aa
AA seq
DB search
MAFKSAFPSSTSGLPSVEPEHIQFLMFTDEDIKKLSVTKITQIQSFDAIGNPTKGGLYDS
ALGPLRDRNDNCETCNNSLLHCPGHFGHIELPLVVINPLFTKSIYMLFRISCLKCFRIQL
DDRLKSLLKLQLDLVDAGHITAALDLDYYVSETYSSKESPDKPNKTIRKYRKLLKTKDVI
VETFHSKNTDKIRSKIITGYFRSMNIVKKCMFCMAKLIKVNTSEGKIMYNLSAEGSTPGT
KGIKILMPDEIRRFCVDISKNDEDLLKYCFPVLKHTSASPAINIFFMEIVPVLPPCVRPC
NILRGELIEHPQTNVYKAILLHSYAARVILQVLSASNQQKAQDCLDTAPRQAYEAVQGKT
PAEKLHVAWQDLQKSVNHLLNCEGMGASSQGLKQILEKKTGLIRMHMMGKRVNFAARSVI
TPDPNVDIDEIGIPDAFATKLTYPVPVTEWNVDELRKMVINGPNKHPGAEKLEIGNGRII
RIPADSIQKRKSLAKRLLTPDEYKTTGLKTVHRHLVNGDILILNRQPSLHKPSMMAHRAR
ILKGEKTLRLHYANCKSYNADFDGDEMNAHFPQDENARSEAYNIMSVTKQYLVPKDGTPL
SGLIQDHVISGVKMSLRGTFYNKSDYQQLVFQALSNHRGKIQLLPPTILKPIVLWSGKQV
LSTIIINTIPKGKPCLSLTGKAKISAKAWQKEEPRQWNGGGSPFTNPNTMTEAEVIIRKG
ELLCGVLDKTHYGATPYGLVHCMYELYGGECSSALLSSFSKVFTFYLQWMGFTLGVKDIL
VVKEADDRRDNYICLVRKSGKVAAVKATDLPMDVDDKKLKDTIAEMNAKDPKFRSNLDRH
YKNMLDSYTNNINKVCLSEGLLEKFPYNNLQLMVQSGAKGSTVNTMQISCLLGQIELEGK
RPPLMISGRSLPSFPPFDVSPRAGGFIDGRFMTGIQPQEFFFHCMAGREGLIDTAVKTSR
SGYLQRCLIKHLESISVAYDNTVRDADSSIIQFAYGEDGLDVLKCQFLKQDQFEFLDKNS
NAVVSKSVIKKLKENVDGNDVLKLQKSLKKWKKRNGNPLQKVRVSGFSQFSVLARNEIEL
DDLPTDRTRDPYYWELEKKWREMDEDEKQQYIRKPCPDPISSKSPQFKFGVINEQLDNII
QNYLKNRSNSLYESYTDKKKFVEVMNAKFLESMASPGEPVGLLAAQSIGEPSTQMTLNTF
HFAGRGDMNVTLGIPRLREILMTASAKLKTPNMDIPFLNVSDVTKKAEKLRQKLNRVTIA
DVLEKIDVQCEIVVRPERQLKTTMKFTFLPHKQYKTQYAVKPTQIIKHMQNKFFDEMFTV
VRKHAKATCGVMWASEQKKQRARAAKSDEDDGDDAPEPTDTANNDLDSSDDEAPNEDDDN
TAAKIRNKRTEEQEYEDPESEEEEKSDDEVELVDDQAKESEEGQESPKENDADSSKIISD
VVGSVRNATNYTFDTKNHQWCELTVLFPISFLRIDLSQALRETAMKSVVHEIKHIKRAIT
HKDNDIVYLKTEGINILQMFKYNHLLDMNRLYSNDIHAMANTYGIEAANKVIIKEIQNVF
NVYGITVDPRHLTLIADYMTYNGIFEPMSRKGMEASSSPLQQMSFESSLLFLKDAILNSK
KDDLRSASSCLMVGRLCRTGTGVFDLQHSHLYGKVNLSKS
NT seq
4983 nt
NT seq
+upstream
nt +downstream
nt
atggcttttaaatcggcgtttccatcatcaacgtctgggttgccctccgtcgaacccgaa
cacatacagtttcttatgttcactgatgaagatataaaaaaattgagtgtaacaaagata
acacaaatccaatcgtttgacgccatcggtaaccctactaagggaggcctgtacgattct
gcactaggaccactaagggacaggaacgataactgtgagacatgtaacaattcgttactg
cattgccctggacattttggacacatcgaactgcccctcgtggtaattaatccactcttt
acaaaaagtatttacatgctattccgtataagttgtctcaaatgttttagaatacaactt
gacgatcgcttaaagtcgctattgaaactgcaattggatctagtagatgcagggcatata
acagcagctttagaccttgattactatgtaagtgaaacatacagtagtaaggagtctccg
gacaaaccaaataaaactataagaaagtatagaaaacttttgaaaacaaaagatgtaatt
gtggaaacatttcacagtaaaaacactgataaaattagaagtaaaataataaccggctat
tttaggagcatgaatattgtaaaaaaatgtatgttttgtatggccaaactaataaaagtt
aatacatccgaaggtaaaataatgtataatttgagtgctgaaggttcaacaccaggaaca
aaaggcattaaaatattgatgccagacgaaatcagacgattttgtgtggacatttcaaaa
aatgatgaagatctgttaaaatattgtttccctgtattgaaacatacatctgctagtcca
gcaataaatatatttttcatggaaattgtgcctgtgttacctccgtgtgtaagaccctgc
aatatcttgagaggagaactgattgagcatcctcaaactaatgtttataaagccatattg
ttacactcctatgctgctagagtcattttacaagttctctcagcctcaaatcaacaaaag
gctcaagactgcttagatacagcaccaagacaagcatatgaggctgttcaaggtaaaaca
ccagctgaaaaattacatgttgcgtggcaggacctacaaaagagtgttaatcatttactg
aattgtgaaggtatgggagcatcaagtcaaggtcttaaacagatactggaaaagaaaact
ggcttaataaggatgcacatgatgggcaaaagagtgaattttgctgcaagatctgtcatt
accccagatcccaatgtcgacatagatgaaataggcatcccagatgcttttgccacaaaa
ctaacatatcccgtcccggttacggaatggaatgttgatgagctacgtaaaatggtaatc
aatggacccaataaacatccaggagcagagaaattagagattgggaacggtagaataatt
agaatacctgctgactctatacaaaaacggaaaagtcttgcaaaacgccttctgacacct
gatgagtacaaaaccaccggcttaaagacagttcacagacatttggtgaatggtgacatt
ttgatccttaaccggcagccttctttacataagcccagtatgatggctcatcgagcaagg
atattaaaaggagagaagacccttcgactacactatgctaactgcaaatcgtacaatgct
gactttgatggagacgaaatgaatgcccatttcccacaagacgaaaatgcaagaagtgaa
gcatacaacataatgtctgttacaaagcaatatctagtacctaaagatggcacacctcta
agcggtttgatccaagatcatgttatatctggtgtaaaaatgtcacttagaggtactttt
tataataagtcagattaccagcagttggtatttcaagctctctcaaatcacagaggtaaa
atccagctgttacctcctaccatactgaaacctattgtactgtggtcaggtaaacaagtt
ctatctacaataattatcaacacaatacctaaagggaaaccatgcctttcgttaactggt
aaagccaaaatcagtgcgaaagcctggcagaaagaagaaccgagacagtggaatggcggt
ggcagcccatttaccaatccgaataccatgactgaagctgaagttattatcagaaaaggt
gaactattgtgtggagtactagataaaactcactatggagccacaccctatggcttagtc
cactgcatgtatgaattgtatggtggggaatgctctagtgcattattgagttctttttct
aaagtcttcaccttttatttacaatggatggggttcactctcggtgtcaaagatattcta
gttgtcaaagaggcggatgataggcgagataattatatttgtttggttcgaaaatctggt
aaagttgcagcggtaaaagctactgacttgccgatggatgttgatgacaaaaaactaaaa
gatacaattgcagaaatgaatgcaaaagatcccaaattcaggtccaatttagatagacat
tataaaaatatgctcgattcttacacaaataacataaacaaagtttgtttatcggaaggt
cttcttgaaaagtttccatataacaatttacaattaatggtacagtctggcgccaaaggt
tctactgtcaatactatgcaaatttcatgtttacttgggcaaattgaattggaaggtaaa
aggcctccgctaatgatatcaggtagatcacttccaagtttccctcccttcgatgtgtct
ccccgagctggcggcttcattgatggccgctttatgacagggatccagccccaagagttc
ttcttccattgcatggccggacgtgaaggtcttattgatacggcagtgaaaaccagtcgt
tccggttacctacaaagatgtttgataaaacatttagagagtatatctgtagcttacgac
aacacggtccgcgatgccgatagcagcatcatacagtttgcgtacggagaggacggcctt
gatgttttgaaatgtcagttccttaagcaggaccaatttgaatttctcgataaaaattct
aacgcggttgttagcaaatcggttattaaaaaattaaaagagaacgtcgacggaaatgac
gttttaaaattgcaaaagtctctgaagaagtggaagaaaagaaacggcaatccattgcaa
aaagttcgcgttagtggattcagtcaattctctgtattagccaggaatgaaatcgaacta
gacgatcttccaacagaccgaacaagagatccgtattactgggaactagagaagaaatgg
cgagaaatggacgaagatgagaagcaacaatacattaggaaaccctgtccagatcctatt
tcaagcaaatcgcctcaatttaaattcggtgtaataaatgaacaattggacaacatcata
caaaactaccttaagaatagatctaatagtctctatgaatcttacacagacaaaaagaag
ttcgttgaagtaatgaatgctaaattcttggagtctatggcttcacccggagagccagtg
ggattgctagccgcccagtctatcggtgagccctcgacccagatgacattgaacaccttc
cattttgccggtcgaggtgacatgaacgtcaccctcggaataccacgtctgcgggagatc
ctaatgactgcatcagcgaaacttaaaactcccaacatggacatacctttcctaaacgtg
tcggacgtgacaaaaaaagcagagaaactgagacagaaattgaacagagtgactatagcg
gacgttctagaaaagattgacgtgcaatgcgaaatcgttgtgagaccagagagacaactg
aagaccaccatgaaattcacattcttaccccacaaacaatataagacgcagtacgctgtg
aagccgacgcaaattataaaacacatgcaaaataaattcttcgatgaaatgtttacggtg
gtgcggaagcacgccaaggccacgtgcggcgtgatgtgggcctccgaacagaagaagcag
cgagccagggctgccaagagcgacgaggacgacggcgacgacgccccggagccaacagac
acggccaacaacgatctcgactcttcagacgatgaagcacctaatgaagatgatgataat
acagccgccaagattcgcaataaaagaacagaagagcaagaatacgaggacccagaatca
gaggaggaagaaaaatctgacgatgaagtggaactcgtcgatgatcaagcgaaggagtcc
gaagaaggtcaagagtctccaaaagaaaatgacgctgattccagcaaaattatttccgat
gtcgttggtagcgtcagaaacgcgactaattacacattcgacacaaaaaatcaccaatgg
tgcgaactgaccgtactattcccaatttcatttttgagaatagatttgtctcaagctcta
cgagaaaccgccatgaagtctgtcgtccacgaaatcaaacacataaaacgtgcgatcact
cataaagacaatgacatcgtctatctaaaaacagaaggcatcaacatattgcagatgttc
aaatacaatcatttgctggacatgaacagactgtacagcaacgacatacacgcgatggcc
aacacgtatggcatcgaagccgccaacaaagtcatcataaaggagatacaaaacgtattt
aacgtttacggtatcactgttgatccgcgccacttgaccctcatagccgactacatgacg
tacaacgggatctttgagcctatgagccggaagggaatggaggcgtcttcgtcgccgtta
cagcaaatgtcgttcgaatcgtcgcttttgttcttgaaggacgccatattgaattctaag
aaagacgatctccggtccgcctctagctgtctgatggtcggccggctgtgtcgcaccggc
accggcgtgttcgatctgcagcactcgcacttgtatggcaaagttaatctgtctaagtcg
tga
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integrated database retrieval system
