Bombyx mori (domestic silkworm): 110385709
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Entry
110385709 CDS
T02817
Name
(RefSeq) enhancer of mRNA-decapping protein 4 isoform X1
KO
K12616
enhancer of mRNA-decapping protein 4
Organism
bmor
Bombyx mori (domestic silkworm)
Pathway
bmor03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bmor00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
110385709
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bmor03019
]
110385709
Messenger RNA biogenesis [BR:
bmor03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
110385709
mRNA degradation factors
5'-3' decay
Decapping complex
110385709
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ge1_WD40
EDC4_C
WD40_Prp19
WD40
WD40_CDC20-Fz
WD40_WDHD1_1st
P16-Arc
WDR55
Motif
Other DBs
NCBI-GeneID:
110385709
NCBI-ProteinID:
XP_037866621
UniProt:
A0A8R2LUB9
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Position
4:1252584..1274381
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AA seq
1101 aa
AA seq
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MQPPTMLPKLSDTTQTIAFAEGDGMSCIEVYSSDVVVTINTGNHDHGSSKVKLKNLVDYN
WEPKFYPGQLLAIHISGKYLAYSIKAPNTANPGTCSGMVRVVYNLEPGTDRRALIKGMKG
EVQDLSFAHIQNEIVLACIDEQGNFYVHEIEATDSGLRCTLIAEIREDTGIVGSFHRVVW
CPYIPDEEDDDPDEDVDRLLLTTHANTARIWNMRVIARAVAGTEGVGGAGALAGGAGTLS
AGGHAADLVDAAFSPDGTALATAAADGYVMFFQVCMQNRSPRCLHKWQPHDGKPLSCLFF
LDNHNNYNSDVQFWKFAVTGADNNTCIKIWSCKSWNCLQTISFAPEVPNESSLGLKVMLD
RSARFLVVSAASGRALYVLGVARDAADTHAHCTALAHFLLPFPVLSFCIADAEEQTAKCE
SSCSDPFHRSESADPAGPSPDDFDLQPDVADSGSECGCVGRAALRLYVVQPKGLQEGRLA
FALPAGGAPEEQGGEAGPAAVPSSILQQQSQQLKNLLMRSQVHNEQTDTQPGSLIGQRAE
SPPIPPQLNLMTPDAFSSPGKREEEDPPLSATPDVSAKPRGSVGGDADRAKGAEGAGKPT
SGGSSPSREVQEIMAHNDDAFFADNLEEESPAPPAAARQPEPFPDKPPPPPLALPHSNGD
TSWPQISIAQITEANQRKASSDKSGAQSQPLGAACDARLDLLEHKLDKITELLQQQGREL
RALRGATWCPRTALDEALQAHAQALDNAVTLGWERMSAAGEAAGAAAGAGAAQAAGAGAA
RALEPLVAALQHELAAKLTATDQLLRDNIDKLVNSKAVSERLSSSIARCVSEQVRESFRA
SVTDSLLPAMERAHAQIFRQVNNAFQNGTKEFAAHTEAAARAAAERGGAAACTALRAALD
RHADTLAQHPRLLLQHATQAVRDAAHSVLEKELLWWREQARSASLTSRAHSPHTPHAHNP
LDRQMQISQVQNMISSGDVNGAFQLALSASDLSLVVTACRSAEPSLVFGPPCQLKQHVLL
SLVQQLAADMSKDTQLKHRYLEEAVMNLDTSSPVTREHLPGVVAELQQQVSAFVTASPSH
PLARRLRMLLLASDALLKATV
NT seq
3306 nt
NT seq
+upstream
nt +downstream
nt
atgcaaccaccaaccatgttacctaagctttcagatacaactcagacgatagcatttgct
gaaggagatggtatgagctgtatagaagtttactcttcggatgtggtcgtgactatcaac
accggtaaccatgatcatggtagctcaaaagtgaagttgaagaatcttgtagattataac
tgggagcccaagttttatcctgggcagcttctagccattcacatcagtggaaagtacctg
gcatactctattaaagctcctaatacagctaacccaggtacttgcagtggtatggttaga
gttgtgtacaaccttgaaccaggaactgatcgtcgtgctctcatcaagggaatgaagggg
gaggtccaagacttatcatttgcccatattcaaaacgagatagtattggcttgcatcgat
gaacagggcaacttttatgttcatgagattgaagcaactgacagtggactgagatgtaca
ctaatcgctgagattcgtgaagatacaggtattgtgggatcattccacagagttgtgtgg
tgcccttatatacccgatgaagaagacgatgaccctgatgaagatgtggatagacttctg
ctgacgactcatgctaatactgcccgcatctggaacatgcgcgtgatcgcgagggccgtg
gcgggcacggagggggtggggggcgcgggtgcgctggcgggcggcgcgggcacgctgtcc
gcgggcgggcacgccgccgacctggtggacgccgccttctcgcccgacggcaccgcgctc
gccaccgccgccgccgacggatacgtcatgttctttcaggtgtgcatgcagaaccggagc
ccccgctgcctgcacaagtggcagccgcacgacgggaagcccctcagctgtctcttcttc
ctcgacaaccacaacaactacaactctgatgttcagttctggaagtttgccgtgaccggc
gcggacaacaacacctgcatcaagatatggtcgtgcaagtcctggaactgcctgcagacc
atctcgttcgctcctgaagtgcccaacgagagcagtctcggtttgaaggtgatgctggac
aggagcgcgcggttcctggtggtgtcagcggcgagcggccgcgcgctgtacgtgctgggc
gtggcgcgcgacgcggccgacacgcacgcacactgcaccgcgctcgcgcacttcctgctg
cccttccccgtgctcagcttctgcatcgccgacgcggaagaacagaccgcgaagtgcgag
tccagctgctccgacccgttccaccgcagcgagtccgccgaccccgccgggccctcgccc
gacgacttcgacctccagccggacgtggcggactcgggctcggagtgcgggtgcgtcggg
cgggccgccttgcgcctctacgtggtgcagcccaagggcctgcaggaagggcggctggcc
ttcgcactgcctgcaggcggcgcgcccgaggagcagggcggcgaggccgggccggcggcc
gtgccctccagcatcctgcagcagcagagccagcaactcaagaacctgctcatgaggtca
caggtacacaacgaacagacagatacgcagcccgggagcctcatcggtcagagggcggag
tctccgccgatccctccgcagctcaacctcatgacgcccgacgcgttcagctcgccgggc
aagagggaggaagaggatccgccgctgtcggccacgcctgacgtcagcgccaagccgcgc
ggctccgtcggaggggacgccgaccgcgccaagggagccgagggcgcgggcaagcccacc
tcgggggggtccagtcccagccgggaggtgcaggagatcatggcgcacaatgacgacgcc
ttcttcgccgacaacctggaggaggagtcgccggcgccgcccgccgccgcccgccagccg
gagcccttcccggacaagccgccgccgccgccgctcgcgctcccgcactccaacggcgac
acctcgtggccgcagatatccatagcgcagataacggaagcgaaccaacgcaaggcgtcc
agcgacaagtcgggcgcgcagagccagccgctcggcgccgcgtgcgacgcgcgactcgac
ctgctcgagcacaaactggacaaaatcacagagttgctgcagcagcagggtcgcgagctg
cgggccctgcgcggcgccacgtggtgtccgcggaccgcactggacgaagcgctgcaggca
cacgcacaggccttagataatgctgtcacactagggtgggagcgcatgtcggcggcgggc
gaggctgcgggcgcggcggcgggcgcgggcgcggcgcaggcggcgggcgcgggggcggcg
cgcgcgctggagccgctggtggccgcgctgcagcacgagctcgccgccaagctcaccgcc
accgaccagctgctcagggacaacatcgacaaactagtcaacagcaaggcggtgtcggag
cggctgagctcgtccatagcgcgctgcgtgtcggagcaggtccgcgagtccttccgcgcg
tcggtgacggacagcctgctgcccgccatggagcgcgcgcacgcacagatcttccgacaa
gtcaacaacgccttccagaacgggactaaagagttcgcagctcacacggaggccgcagcc
cgcgcggcggcggagcgcggcggggcggcggcctgcaccgcgctgcgggccgcgctggac
cggcacgccgatacgctggcgcagcacccgcgcctgctgctgcagcacgccacgcaggcc
gtgcgggacgcggcgcacagcgtgctggagaaggagctgctgtggtggcgcgagcaggcc
cgctcggcgtcgctgacgtcacgcgcgcactcgccgcacacgccgcacgcgcacaacccg
ctcgaccgacagatgcaaatatctcaagtgcaaaacatgatctcatcgggtgacgtgaac
ggcgccttccagctggccttgtccgcctcggacctgtccctcgtggtcacagcctgcagg
tcggccgagccttcactggtgttcgggcccccctgtcagctcaagcagcacgtactgcta
tcattagttcagcaactggccgccgatatgtccaaggacacgcagctcaagcacaggtat
ctagaggaagcagtaatgaacctggatacgtctagtcctgtgacccgtgagcatctgcca
ggagtcgtagctgaactgcagcagcaagtgtcggccttcgtgaccgcctcgccctcgcac
ccgctggctcgcagactgcgcatgttgctgctggcctctgatgctctgctcaaggccacg
gtgtga
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