Bombyx mori (domestic silkworm): 119629098
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Entry
119629098 CDS
T02817
Name
(RefSeq) endoribonuclease Dcr-1 isoform X1
KO
K11592
endoribonuclease Dicer [EC:3.1.26.-]
Organism
bmor
Bombyx mori (domestic silkworm)
Brite
KEGG Orthology (KO) [BR:
bmor00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
bmor03036
]
119629098
Chromosome and associated proteins [BR:
bmor03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
119629098
microRNA pathway
RISC loading complex
119629098
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribonuclease_3
Dicer_dsRBD
Ribonucleas_3_3
Dicer_dimer
Dicer_platform
PAZ
Helicase_C
Dicer_PBD
Motif
Other DBs
NCBI-GeneID:
119629098
NCBI-ProteinID:
XP_037869731
LinkDB
All DBs
Position
11:4313106..4364370
Genome browser
AA seq
2442 aa
AA seq
DB search
MVEPSIYKFTTAEGGARLAAIASERNTLAVEYSNFIATRLVYEEAYKIRGSLYDNKQRSV
HVTREDRIKCTAYDLRIMTDLSLCEAEKYDDVYDWYAELDKKEVLVCTSVVLKRILEEGI
ISMANINVLIIDSCHLIVTDENLKYIMQVYKDSEESKRPRILSLTYPLFGSHKKSEDIHN
DKQADNSEDSNKRDSCNLKDMLIEEDKHDNERSEKDMRHSQTDSPNEITCDSDIGSLKDT
KTDLEQDIVAEDKSLESENIDDFDMYEKLEWKIEQLENELCCKMDLAEDIDTGKRTAAAS
TKPNELIVEYCPRRPDSELSEDYLELESYMKRTVEDVAEFVNDHRHDPTEIYGDELYEEF
KNIPDPTNEPKMMFKQFLHVLEELGPYAADKAAFSILTKLEKLKIKVPYERHFLLLCLCT
TVFVRIRCYADLVFGKLESDWDRIRAFSTPKILRLAEILERFRPPDTPHDEGKRNGLAQN
EAAANSKDSCAETSSCITESESSSTITSNSSLRTDSGHVILESGNTDKENFASLNNAVNV
VADLCGSTENVKNGDNGGRLNNTSPNETDNTQVKTEPDEEKIKSKTLELLSAIEKCDFAY
LADRIEDKVNAYEANLKEIDVYIDKCDRDGDSEPNETGAQEERKSSYCNEKIPQPHLDPL
QVKPSPLRRSGNRVRGRTKLRNNANRTQNTGQNPDALCGVLFVKEPLMAKILFMIIADLS
RCHPKLSYVCAQYCAVENPEESLEPRECQRQNKKHEDVLKKFRMHECNLLLATAALEEGI
DLPRCNLVLRWDAPPSYRSYVLCRSRARAARSAALALLRTGGPLLDTLPIYRELDQIITR
KCGCGVQNEPTQQQEDEADTFTGLIKPYAPNDNKKHVLRMEPSIDHMKDSKKETKLSENY
VTVSDVSDVNELNDKRNVKEKDDKKIEWTKTEDVDVISNKSESDLCQTCNDSDPCPSEVS
KVYSDLKYDVKCENETGGSVDLSSAIALINRYCGKLPSDTFTRLAPQCWTDKVRLPGRDG
VERDAYICTLRLPLNCPVKYNIVGHPMPSRVLARRMVALQACRILHRSGELDDQLQPIGK
ENFKAAELDSRDSSEEGGELARPGTTKRRQYYYKRTASAFTDCQPIEDSSDTEVDPPDGV
PRTMPTPRPEPKPGEKRNVLYLLSSELRCALPERYNTRGRRLHAPQHAHHALALLLARTD
TDLHLQVPAFPVYTRSGEVRVSLQHAPDADVRISPRRGRLVRRFMRFVFSEVLRVRRRGM
RLQSEGSTHNNYYVVPTIKTVKEDGTPKIDIDWAFLELIYKHTEEKKSSEVEKPMLWRNE
DEGEEGDEGEQGGDVSGKQVKQKGKVKKMDNPLLKPGEVFVFDPDKYKEAVVTPWYRNQD
QPQYFLVAEICWRLSPDSVFPSASHATFRDYYQNKYGVTITQSKQPLLDVDHTSARLNLL
TPRYVNRKGVALPVSSERTRRAKRERLDQKQLLLPELCRAHPFAAPLWAATVALPCALYR
INALLIAEEIRRSVAVEVGLGIPHPHARPPPLDFGWSLAEVLSADAEKNDKKKEEESKKE
QKEKEDKPGDDSAETNTDGAADEGGGAETKTINDILQEKEDAENGFEIGTWSNEMASSIP
EDTDFDEYLEPLPPNLTFCTSASGSASWCDPIQKPKSEFNPTRSYSVADSDCSYMSSDFD
TDDSDLDSECSDEDTDNSGFCSSKHSNAAMGVRIEYRTAHEAEAVDVGGNDKVNPAPAAD
PRLEERDLELQRRIIRDGLAPPEHIERFRSSVAAHKEHITRNCLIQRDEPVGEVLPPLIT
QKTTLNTPNVEAKVLEMFPYGTRELRHADDGRLTLQSVERNKRFILNHLKTNLKPEEIKS
LFCFSMKDIDIDAPDYVDEKITNIGFDDGDKYNTGNEFKPYYEDDKGGQKREFDFDFQPV
LEGHPGPSPSVILQALTMSNANDGINLERLETVGDSFLKFAITAYLYCAHPNVHEGKLSH
MRSKQVSNLNLYRLGRNKQLGSRMIASKFEPHDNWLPPCHEPPPTLHPKLNLNGQDKKQN
VDSSPENVGCFIPYNLITQHSIPDKSIADCVEALIGAYLLECGPRGALLFMSWLGIAVLP
RHLAALPHTHSTSEQRETSAEPPPARRRVGSLPPYRDRQGNWVQQVYGELKAPPSPLLRY
VEDPEGELEKMLSGYEQLERVLQYRFRDRSLLLQAMTHASHHRNVLTDCYQRLEFLGDAI
LDYLITRHLYEDKRCHSPGALTDLRSALVNNTIFATLAARHGFHKYFRHMSPGLNEVLKK
YVKIQEENGHSISEEHYLIHEDEMEQAEDVEVPKALGDLFESVAGAIFLDSGMSLGAVWK
SYGRLMGRELEAFSAAAPKSPVRELLEAEPDTAKFGKPERLADGRRVRVCVEVFGRGTFR
GVGRNYRIAKGTAARCALRHLRRGRCSARPPPHTHSPYHDVQ
NT seq
7329 nt
NT seq
+upstream
nt +downstream
nt
atggtggagccatcaatttacaagtttaccacagctgaagggggtgctcgtctcgctgca
attgcatctgaacgtaacacccttgctgtggaatactcaaatttcattgcaaccaggctg
gtctatgaagaagcttataagatacgagggtcgctctatgataataagcagagatcagtg
cacgtgacaagagaggatcgtataaaatgcaccgcctacgatctgaggattatgaccgac
ttgtcgttgtgtgaggctgagaaatacgatgatgtgtatgattggtacgcggaacttgat
aagaaagaagttttggtctgcacttcagtagttttaaaacgaattctagaagagggaata
atatcaatggcgaatattaatgttctaataattgatagctgtcatttaatagtgaccgac
gagaatttgaaatatattatgcaagtttacaaagatagcgaagaatcaaaaagaccccga
atactttcgttgacatatcctctctttggatcgcacaaaaaatctgaagacattcataat
gacaaacaggcagataactctgaggattcaaacaaaagagactcatgtaatttgaaagat
atgctgatagaagaagataaacatgataatgaaaggtcagaaaaagatatgagacactct
caaactgattcaccgaatgaaattacttgcgacagtgacattggatctttgaaagataca
aaaacagacctagaacaggatatagttgctgaagataaatcattagagagcgaaaatatc
gatgatttcgatatgtatgagaagttggagtggaaaattgagcaactggagaatgagttg
tgctgtaaaatggatcttgctgaagacatcgacacagggaaaagaacagcggcggcatcc
accaaaccaaatgagctgatagtcgaatactgtcctcggagacctgatagcgagctctca
gaggattacttggagctggagagctacatgaagaggaccgttgaagacgtcgcggagttt
gttaatgatcacagacacgatcccaccgagatatacggagacgagctgtacgaggagttc
aagaacattccggacccgacgaacgaacccaaaatgatgttcaaacagttcttacatgtt
ctagaagaactgggtccttacgcagccgacaaagcggccttttcgatattaacgaaatta
gagaagttaaaaattaaagtgccgtacgaacgacatttcctcttgttgtgcctctgcacg
accgtgttcgtcaggatacgatgttacgcggacctcgtgttcgggaagctggagtcggac
tgggaccgaatccgggccttctcgacgccgaaaatactgaggttggccgaaatattagag
aggtttcggccgcccgatacacctcacgacgaaggcaagaggaacggcctcgctcaaaac
gaagccgccgccaactcgaaggattcgtgcgccgaaacatcgagttgcataacggaaagc
gaaagctctagcaccatcactagtaattcgagtttacgtaccgacagcggacatgtgatt
ctcgagtctggcaataccgacaaagaaaattttgccagtttaaataacgcagttaatgta
gtcgctgacctgtgcggttctacagagaatgttaagaacggtgacaatggcgggcgtcta
aataacacaagcccaaatgaaaccgataatacacaagtgaagaccgagcctgatgaagaa
aaaatcaaatcgaaaaccctcgaattactgagtgctatagaaaaatgtgatttcgcgtat
ttagccgataggatagaagataaagtcaacgcttacgaagctaacctgaaagagatagac
gtttacatcgacaagtgcgatagagacggggatagcgaaccgaatgagaccggggcacag
gaagagagaaagtcgtcatattgtaacgaaaagatcccccagcctcacctagatccgctc
caggtcaaaccgagtcctctcagacgttccgggaatcgcgtcagaggcaggaccaaactc
aggaacaacgccaatcgaacccaaaacacgggacagaatcctgacgccctgtgtggcgtt
ttattcgtcaaggaaccgcttatggccaaaattctcttcatgattatcgcggacctgtcc
cgttgtcatccgaagttatcgtacgtgtgcgcccagtactgtgcagtagagaaccctgaa
gagtccctagagcccagagagtgccagcgacagaataagaaacacgaagatgttctcaag
aagttccggatgcacgagtgcaacctgctgctggccacggcggcgctggaggagggcatc
gacctgccgcgctgcaacctcgtgctgagatgggacgcgccgccctcgtaccgctcgtac
gtgctgtgccgcagccgcgcccgcgccgcccgctccgccgcgctcgccctgctgcggacc
gggggcccgctgctcgacacgctgcccatctacagggaactcgatcagatcataacgcgg
aaatgcggatgcggtgtacagaatgaaccgacacaacaacaggaggatgaggccgacaca
ttcaccggacttataaagccctacgcgccgaatgataataaaaaacatgtattgagaatg
gaaccatcgatcgaccatatgaaggatagcaagaaagaaactaaattaagtgaaaactat
gtaaccgtgtcagacgttagtgacgttaatgaattaaatgataaaaggaatgtaaaagaa
aaagatgataaaaagattgaatggactaaaacagaggacgtcgatgttatctcaaataag
tccgaaagtgatttgtgtcagacttgtaatgacagtgatccttgtccgagtgaagtgtcc
aaagtgtacagtgatcttaagtacgatgtcaagtgtgagaacgagacgggtggcagtgtg
gatcttagttcggccatagctttgattaacaggtactgtggaaagctcccctccgacacg
tttactaggttggcccctcagtgctggacggacaaggttcgactccctggtcgggacggt
gtcgaacgggacgcatacatctgcacgttgaggctgccactgaactgtcctgttaaatat
aatattgtcggccacccgatgccgagtcgagtgctggcgcggcgcatggtggcgctgcag
gcctgcaggatactgcacaggtccggagagctggacgaccagctgcagcccataggaaaa
gagaatttcaaggcagccgaactcgattcccgcgacagttcggaggagggcggcgagctg
gcgcggcccggcaccaccaagcgccgccagtactactacaaacggacggcgtccgcgttc
acggactgtcagccgatagaggacagcagcgacacggaggtggacccgcccgacggcgtg
cccaggacgatgccgacgcccagaccggagccaaagccaggcgagaagaggaacgtgctg
tacctgttgtcgagcgagctgcgctgcgccctgccggagcggtacaacacgcgcggccgc
cgcctgcacgcgccgcagcacgcgcaccacgcgctcgcgctgctgctagcgcggaccgac
acggacttgcacttgcaggtgccggcgttcccggtgtacacgcgctcgggcgaggtccgc
gtgagtctgcagcacgcgcccgacgccgacgtgaggatctcgccgcgcagaggacgcctc
gtgcgcaggttcatgcgcttcgtgttctcggaggtgctgcgcgtccggcggcgcggcatg
aggctgcagagcgagggctccacgcacaacaactactacgtggtaccgacgataaagacc
gtaaaggaggacggcactccgaaaatcgatatcgactgggcgttcttggagctgatatat
aaacataccgaggagaagaagagcagcgaagtggagaaaccgatgctgtggaggaacgaa
gacgagggggaggagggagatgagggggagcaggggggtgacgtcagcgggaagcaggtg
aagcagaaagggaaagtgaagaagatggacaacccgctcctgaagccgggtgaggtgttc
gtgtttgaccccgacaagtacaaggaggcggtcgtgacgccgtggtacaggaaccaggac
cagccgcagtacttcctggtggcggagatatgctggcgcctgagtcccgactccgtgttc
ccgtcagcgagccacgcgaccttccgcgactactaccagaacaagtacggcgtcaccatc
acgcagagcaagcagccgctgctggacgtggaccacaccagcgccagactcaacctcctc
actcccagatacgtgaaccgcaagggcgtggcgttgcccgtgtcgtcggagcgcacccgc
cgcgccaagcgcgagcgcctcgaccagaagcagctcctgctgcccgagctgtgccgcgcg
catcccttcgccgcgccgctgtgggccgccaccgttgcgctgccctgtgcgctctaccgt
ataaacgcgttgctgatcgcggaggagatccgtcgctcggtggccgtggaggtcgggctg
ggcatcccgcacccgcacgcccgcccacctccgctcgacttcggctggagtctcgccgag
gtgttgtcagccgacgcggagaagaacgataagaagaaagaggaagagtcgaaaaaggaa
cagaaagagaaggaagacaagccgggggacgactcggccgagaccaacacggacggtgcg
gccgacgagggcgggggggcggagacgaagaccatcaacgacatactgcaggagaaggag
gatgcggaaaacggcttcgagattggcacgtggagtaatgagatggcgtcctcgataccg
gaggacactgacttcgacgaatacctagagcctctacctccgaatcttaccttctgcact
tccgcttccggcagcgcgagctggtgcgacccgatccagaagccgaagagcgagttcaac
ccgacgcggagctactcggtggcggacagcgactgctcctacatgtccagcgacttcgac
accgacgactcggacctggacagcgagtgcagcgacgaggacaccgacaacagcggcttc
tgcagcagcaagcactccaacgcggccatgggagtccgcatagagtacaggacggcgcac
gaggcggaggccgtggacgtcggcggcaacgacaaggtcaacccggcgcccgcagcggac
ccccggctggaggagcgggacctcgagctgcagaggcgcatcatcagggacgggctcgcg
ccgccagagcacattgagaggtttcgttcctccgtggccgcacacaaggagcacatcacg
aggaactgcttgatacaacgtgacgagcccgtcggggaagtattgccgccgttgatcacg
caaaaaacgaccttaaacacaccgaacgtagaggcgaaagtcctcgagatgttcccgtac
ggcacacgagagctgcggcacgcggacgacggacgtctcacgctgcagagcgtcgagcga
aacaaacgcttcatactgaatcatttgaaaacgaaccttaagcctgaagagataaagtcc
ttattctgtttctcgatgaaggacatagacattgacgctcccgattacgtggacgagaaa
ataacgaatataggcttcgacgacggagacaaatacaatacgggcaacgaatttaaacct
tattacgaagatgataagggcggtcagaagagggagttcgactttgattttcaaccggtt
ctagaaggacatccgggtccgagtcccagcgtgatactgcaggcgctgacgatgtcgaac
gccaacgacggcatcaacctcgagaggctggagaccgtcggggacagcttcctgaagttc
gcgatcaccgcgtacctgtactgcgcgcaccccaacgtgcacgaggggaagctcagccac
atgcggagcaagcaggtgtcgaacctgaacctgtaccgtctcgggcgcaacaagcagctc
ggcagcaggatgatcgcctccaagttcgagccgcacgacaactggctgcccccctgccac
gagccgccccccaccctccaccccaagctcaacttgaacggtcaagataagaaacagaac
gtcgattcgtctccggagaacgttggatgcttcatcccttataacttgataacgcagcac
agcatcccggacaagtcgatagcggactgcgtggaggcgctgatcggcgcctacctgctg
gagtgcgggccgcggggcgcgctgctgttcatgtcgtggctcggcatcgccgtgctgccg
cgacacctcgccgcgctccctcacacgcactcgacctcggagcagcgggaaacttcggcg
gagccgccccccgcgcgccgcagggtcggctcgctgcccccctacagggaccgccagggg
aactgggtccagcaagtgtacggcgaactgaaagctcccccgtcgccgctgctccgctac
gtggaagaccctgagggtgagctggagaagatgctgtccggctacgagcagctggagcgc
gtgctgcagtacaggttccgggaccgctcgctgctgctgcaggcgatgacgcacgcgtcg
caccacaggaacgtgctcaccgactgctaccagcggctcgagttcctcggcgacgccata
ctcgattacctgatcacgcgtcacctgtacgaagacaagcgctgccactcgccgggagcc
ctcaccgacctccgctcggcgctggtcaacaacaccatcttcgcgaccctggcggccaga
cacggctttcacaaatatttcagacacatgtctcccggcttgaacgaggtgctgaagaaa
tacgtgaagatacaagaggagaacggacactctataagcgaagagcactatctgatccac
gaagacgagatggagcaggcggaggacgtggaggtgcccaaggcgctcggagacctcttc
gagtcggtcgccggcgccatattcctggactcgggcatgtcgctgggcgccgtgtggaag
tcgtacgggcggctgatgggccgcgagctggaggccttcagcgcggccgcgcccaagtcg
cctgtccgcgagctgctcgaggccgagcccgacaccgccaagttcggcaagccggagcgg
ctggcggacgggcggcgcgtgcgcgtgtgcgtggaggtgttcgggcgcggcacgttccgc
ggcgtcggacgcaactaccggatcgccaaggggaccgcagcgcgctgcgccctgcgacac
ctgcgccgggggcggtgctccgcgcgcccccccccacacacgcactcgccctaccatgac
gtacagtga
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integrated database retrieval system
