KEGG   Bombyx mori (domestic silkworm): 692462
Entry
692462            CDS       T02817                                 
Symbol
RFC40
Name
(RefSeq) replication factor C subunit 2
  KO
K10755  replication factor C subunit 2/4
Organism
bmor  Bombyx mori (domestic silkworm)
Pathway
bmor03030  DNA replication
bmor03410  Base excision repair
bmor03420  Nucleotide excision repair
bmor03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:bmor00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    692462 (RFC40)
   03410 Base excision repair
    692462 (RFC40)
   03420 Nucleotide excision repair
    692462 (RFC40)
   03430 Mismatch repair
    692462 (RFC40)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:bmor03032]
    692462 (RFC40)
   03036 Chromosome and associated proteins [BR:bmor03036]
    692462 (RFC40)
   03400 DNA repair and recombination proteins [BR:bmor03400]
    692462 (RFC40)
DNA replication proteins [BR:bmor03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RFC (replication factor C)
    692462 (RFC40)
  DNA Replication Termination Factors
   ELG1-RFC complex
    692462 (RFC40)
Chromosome and associated proteins [BR:bmor03036]
 Eukaryotic type
  Sister chromatid cohesion proteins
   CTF18-RFC complex
    692462 (RFC40)
DNA repair and recombination proteins [BR:bmor03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    RFC (replication factor C)
     692462 (RFC40)
  Check point factors
   HRAD17(Rad24)-RFC complex
    692462 (RFC40)
SSDB
Motif
Pfam: Rep_fac_C AAA DNA_pol3_delta2 AAA_22 AAA_14 AAA_lid_RFC1 Rad17 AAA_16 RuvB_N RCF1-5-like_lid Mg_chelatase nSTAND_NTPase5 AAA_19 Viral_helicase1 AAA_11 AAA_18 MeaB nSTAND3 AAA_24 IstB_IS21 AAA_assoc_2 NTPase_1 RNA_helicase AAA_5 ABC_tran AAA_25 AAA_3 MipZ AAA_28 AAA_29 SRP54 AAA_23 AAA_30
Other DBs
NCBI-GeneID: 692462
NCBI-ProteinID: NP_001036917
UniProt: Q60GE7
LinkDB
Position
14:1669616..1671832
AA seq 340 aa
MEVDEPEKKQVKPSSSKSTNLPWIEKYRPQTFDDIVGNEDTVSRLAVFAKTGNAPNIIIA
GPPGVGKTTTILCLARVLLGVSFKDAVLELNASNDRGIDVVRNKIKMFAQQKVTLPPGRH
KIVILDEADSMTDGAQQALRRTMELYSSTTRFALAANNSEKIIEPIQSRCAVLRYSRLSD
AQILAKVIEICNKENLSYTEEGVSAVVFTAQGDLRSALNNLQSTAQGFGHISPDNVFKVC
DEPHPMVVRQMLEACTKQDIHEAYKVIAKLCKIGYAAEDIVSNIFRVCKTLDISEELKLA
FIREIGLTHMRVADGLSSPLQLAGLLARMCRVAAGGDPEW
NT seq 1023 nt   +upstreamnt  +downstreamnt
atggaagtagacgaaccggagaagaaacaagtaaaacctagttctagtaaatctacaaat
ttaccatggatagagaaatacaggccacaaactttcgacgatatcgttggcaatgaagac
actgtgtcccgcttagccgtctttgctaaaaccggcaatgctcctaacattattatagct
ggacctcctggtgttggaaaaacgacgactatactatgcttagcgcgagttctcctcgga
gtatctttcaaagacgccgtattagaactaaacgcctcaaatgatcgtggtatagatgtc
gtccggaataagataaaaatgtttgcgcaacaaaaggttactttgccacctggtcgacat
aaaatagtgatactagatgaagcggacagcatgactgacggagctcaacaagcattaaga
cgcaccatggagctgtattccagtacaactcgttttgcattagcagccaataatagtgag
aagataatagaacccatacaatctaggtgtgctgtactccggtactccaggcttagtgat
gcacagatactagcaaaggttatagagatctgcaataaagaaaacctatcatacactgaa
gaaggtgtgagtgcagtagtcttcacagcacagggggacttgcgatcagccctgaacaac
ctgcagtcaacagcccagggttttggtcacatcagcccggacaatgtgttcaaagtgtgt
gatgaaccacatccgatggtggtcaggcagatgcttgaagcttgcactaaacaggatata
catgaggcttacaaggttatagcaaaactctgcaagattgggtacgcagcagaggacata
gtcagtaacatattcagagtttgcaaaactttagatatatctgaagagttaaaactggct
ttcatcagagagattggtttgacacacatgagggtagcagatggtctttcgtctcccctg
cagctggccggtctcctcgccaggatgtgcagggtggctgccggcggtgacccggagtgg
tga

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