Bombyx mori (domestic silkworm): 692462
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Entry
692462 CDS
T02817
Symbol
RFC40
Name
(RefSeq) replication factor C subunit 2
KO
K10755
replication factor C subunit 2/4
Organism
bmor
Bombyx mori (domestic silkworm)
Pathway
bmor03030
DNA replication
bmor03410
Base excision repair
bmor03420
Nucleotide excision repair
bmor03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
bmor00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
692462 (RFC40)
03410 Base excision repair
692462 (RFC40)
03420 Nucleotide excision repair
692462 (RFC40)
03430 Mismatch repair
692462 (RFC40)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bmor03032
]
692462 (RFC40)
03036 Chromosome and associated proteins [BR:
bmor03036
]
692462 (RFC40)
03400 DNA repair and recombination proteins [BR:
bmor03400
]
692462 (RFC40)
DNA replication proteins [BR:
bmor03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
692462 (RFC40)
DNA Replication Termination Factors
ELG1-RFC complex
692462 (RFC40)
Chromosome and associated proteins [BR:
bmor03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
692462 (RFC40)
DNA repair and recombination proteins [BR:
bmor03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
692462 (RFC40)
Check point factors
HRAD17(Rad24)-RFC complex
692462 (RFC40)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rep_fac_C
AAA
DNA_pol3_delta2
AAA_22
AAA_14
AAA_lid_RFC1
Rad17
AAA_16
RuvB_N
RCF1-5-like_lid
Mg_chelatase
nSTAND_NTPase5
AAA_19
Viral_helicase1
AAA_11
AAA_18
MeaB
nSTAND3
AAA_24
IstB_IS21
AAA_assoc_2
NTPase_1
RNA_helicase
AAA_5
ABC_tran
AAA_25
AAA_3
MipZ
AAA_28
AAA_29
SRP54
AAA_23
AAA_30
Motif
Other DBs
NCBI-GeneID:
692462
NCBI-ProteinID:
NP_001036917
UniProt:
Q60GE7
LinkDB
All DBs
Position
14:1669616..1671832
Genome browser
AA seq
340 aa
AA seq
DB search
MEVDEPEKKQVKPSSSKSTNLPWIEKYRPQTFDDIVGNEDTVSRLAVFAKTGNAPNIIIA
GPPGVGKTTTILCLARVLLGVSFKDAVLELNASNDRGIDVVRNKIKMFAQQKVTLPPGRH
KIVILDEADSMTDGAQQALRRTMELYSSTTRFALAANNSEKIIEPIQSRCAVLRYSRLSD
AQILAKVIEICNKENLSYTEEGVSAVVFTAQGDLRSALNNLQSTAQGFGHISPDNVFKVC
DEPHPMVVRQMLEACTKQDIHEAYKVIAKLCKIGYAAEDIVSNIFRVCKTLDISEELKLA
FIREIGLTHMRVADGLSSPLQLAGLLARMCRVAAGGDPEW
NT seq
1023 nt
NT seq
+upstream
nt +downstream
nt
atggaagtagacgaaccggagaagaaacaagtaaaacctagttctagtaaatctacaaat
ttaccatggatagagaaatacaggccacaaactttcgacgatatcgttggcaatgaagac
actgtgtcccgcttagccgtctttgctaaaaccggcaatgctcctaacattattatagct
ggacctcctggtgttggaaaaacgacgactatactatgcttagcgcgagttctcctcgga
gtatctttcaaagacgccgtattagaactaaacgcctcaaatgatcgtggtatagatgtc
gtccggaataagataaaaatgtttgcgcaacaaaaggttactttgccacctggtcgacat
aaaatagtgatactagatgaagcggacagcatgactgacggagctcaacaagcattaaga
cgcaccatggagctgtattccagtacaactcgttttgcattagcagccaataatagtgag
aagataatagaacccatacaatctaggtgtgctgtactccggtactccaggcttagtgat
gcacagatactagcaaaggttatagagatctgcaataaagaaaacctatcatacactgaa
gaaggtgtgagtgcagtagtcttcacagcacagggggacttgcgatcagccctgaacaac
ctgcagtcaacagcccagggttttggtcacatcagcccggacaatgtgttcaaagtgtgt
gatgaaccacatccgatggtggtcaggcagatgcttgaagcttgcactaaacaggatata
catgaggcttacaaggttatagcaaaactctgcaagattgggtacgcagcagaggacata
gtcagtaacatattcagagtttgcaaaactttagatatatctgaagagttaaaactggct
ttcatcagagagattggtttgacacacatgagggtagcagatggtctttcgtctcccctg
cagctggccggtctcctcgccaggatgtgcagggtggctgccggcggtgacccggagtgg
tga
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