Bombyx mori (domestic silkworm): 692484
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Entry
692484 CDS
T02817
Symbol
Rpa1
Name
(RefSeq) replication protein A1
KO
K07466
replication factor A1
Organism
bmor
Bombyx mori (domestic silkworm)
Pathway
bmor03030
DNA replication
bmor03420
Nucleotide excision repair
bmor03430
Mismatch repair
bmor03440
Homologous recombination
bmor03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
bmor00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
692484 (Rpa1)
03420 Nucleotide excision repair
692484 (Rpa1)
03430 Mismatch repair
692484 (Rpa1)
03440 Homologous recombination
692484 (Rpa1)
03460 Fanconi anemia pathway
692484 (Rpa1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
bmor03000
]
692484 (Rpa1)
03032 DNA replication proteins [BR:
bmor03032
]
692484 (Rpa1)
03400 DNA repair and recombination proteins [BR:
bmor03400
]
692484 (Rpa1)
Transcription factors [BR:
bmor03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
692484 (Rpa1)
DNA replication proteins [BR:
bmor03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
692484 (Rpa1)
DNA repair and recombination proteins [BR:
bmor03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
692484 (Rpa1)
MMR (mismatch excision repair)
692484 (Rpa1)
DSBR (double strand breaks repair)
HR (homologous recombination)
692484 (Rpa1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rep_fac-A_C
REPA_OB_2
Rep-A_N
DUF223
tRNA_anti-codon
PAS
PAS_8
IBR
Motif
Other DBs
NCBI-GeneID:
692484
NCBI-ProteinID:
NP_001036938
UniProt:
Q5TLD3
LinkDB
All DBs
Position
8:8278163..8287450
Genome browser
AA seq
598 aa
AA seq
DB search
MSYNLSEGALETIMKGGNYDAPIIQMLGTKKIQGNDAGDRYRLLVSDGKYTYSFAMLATQ
LNIMLLSGELTDYSVIQVDQFVTTLLKNVGKGEKRVIIILALTIIANGRDVRHKIGNPQP
WSEEATSAQRPEPKPAPVTPKFTAKVEPKAANLDSSMLSVKMTNPISSLSPYQNKWVIRA
RVMSKTPIRTWSNAKGERKLFSMYPCDETGEIRATAFKNECDTFYDMIQVDKVYYISRCA
IKTANKKFTTLKNDYEMTFTAETVVGEYVGDESAVPTVQYDFLPISEIANKETETLIDLI
DVCKSASDVQELTAKSTGKLLKKREVMLVDASGGAVTLTLWGNEAEKFEGNTNPILAVKG
ARLTEFNGSKSLSCLSSTMLRLNPDVPEAHKLRGWYDNGGADADIVNISAKSGNFTGGSN
EWISFSEAESRQLGTGEKGDYYSLLGVLTFTFSENAVYKACPQEQCNKKLVDQENGLFRC
EKCNREYPNYKHRILLAANVSDPTGDQRVTLFNEAAETMLGKSAEEIARLSEYDKNEYNK
IFDEVKFKTFVFKFRTKMENFNDESRLKTTVVNVQPVDYKDGIARLLKNIKTATGVQV
NT seq
1797 nt
NT seq
+upstream
nt +downstream
nt
atgtcttataatttgtcggagggtgccttagagaccataatgaagggtggtaattatgat
gcaccaataatacaaatgctgggtacaaagaagattcaagggaatgatgctggggataga
tacagattattggtatcagatggaaaatatacatatagttttgcaatgttagccacacag
ttgaatattatgttgctctctggagaacttacagattactctgtgatacaagttgatcag
tttgttacgacattgctgaagaatgttgggaaaggtgaaaagcgtgttattatcattcta
gctttgaccattatagcaaatggtcgagatgttcgtcataagataggtaatccacaacca
tggtcagaggaagcaacatcagctcaacgcccagaaccaaagcctgcaccagtaactcca
aagtttacggctaaagtagaaccaaaagctgctaatctcgattccagtatgctctcggtt
aaaatgaccaatccaatctctagccttagtccttatcaaaataaatgggtaataagagct
cgtgtaatgtcaaaaacacctataagaacatggagtaatgccaaaggggaacgaaaacta
tttagtatgtatccatgtgatgaaactggagaaattagagccacagctttcaaaaacgaa
tgtgacacattctatgatatgattcaggtggataaagtatactacataagtcggtgtgca
atcaaaactgccaataagaagtttacaacattgaagaatgattatgagatgacattcact
gctgagactgtcgtgggtgaatatgttggagatgagtctgctgtgccaacagtccagtat
gactttttaccgatcagcgagattgctaataaagaaactgaaacgctgatagatctcata
gatgtttgcaagtcagcatcagatgtccaagagttaacagctaaaagtactgggaaacta
cttaagaaaagagaagtgatgctagttgacgcttctggtggagctgtaacactaacactg
tggggcaatgaagctgaaaagtttgaaggaaacacaaacccaattttagcagtaaaggga
gctcgtctaactgaattcaacggcagtaagtcattgtcttgtttatcgagcacaatgctg
cgtttgaaccccgatgtacctgaagctcacaaactaagaggctggtacgacaacggaggg
gcagatgccgacatcgtcaacatatctgctaagtcgggtaacttcacgggtggttcgaat
gaatggatatcgttttcggaagccgagagccgtcaactgggcaccggtgagaaaggcgat
tactacagtctcctcggcgtattgacgtttacgttttccgaaaatgccgtgtacaaggca
tgtccgcaagaacagtgcaacaagaaacttgtcgatcaagaaaatggcctattccgatgc
gagaaatgtaatagagaatatcctaattacaaacacaggatcttattggcggcaaacgtc
tcagatcctactggcgaccaacgtgtcacgcttttcaacgaagccgcagaaacaatgctg
ggcaagtccgccgaagaaatcgcacgtctgtcggaatacgacaagaacgaatataacaaa
atctttgacgaagtgaaattcaaaacttttgtctttaaattccgtaccaagatggaaaat
tttaatgatgaatccaggctgaagacgaccgtagttaacgtacaacccgtcgactataag
gacggtattgccagacttctcaagaacataaaaacggccactggagtacaagtttaa
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