Bombyx mori (domestic silkworm): 692838
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Entry
692838 CDS
T02817
Name
(RefSeq) replication factor C (activator 1) 5
KO
K10756
replication factor C subunit 3/5
Organism
bmor
Bombyx mori (domestic silkworm)
Pathway
bmor03030
DNA replication
bmor03410
Base excision repair
bmor03420
Nucleotide excision repair
bmor03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
bmor00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
692838
03410 Base excision repair
692838
03420 Nucleotide excision repair
692838
03430 Mismatch repair
692838
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bmor03032
]
692838
03036 Chromosome and associated proteins [BR:
bmor03036
]
692838
03400 DNA repair and recombination proteins [BR:
bmor03400
]
692838
DNA replication proteins [BR:
bmor03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
692838
DNA Replication Termination Factors
ELG1-RFC complex
692838
Chromosome and associated proteins [BR:
bmor03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
692838
DNA repair and recombination proteins [BR:
bmor03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
692838
Check point factors
HRAD17(Rad24)-RFC complex
692838
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rep_fac_C
AAA
DNA_pol3_delta2
Rad17
AAA_lid_RFC1
AAA_14
AAA_22
RuvB_N
AAA_11
DUF815
AAA_assoc_2
RCF1-5-like_lid
AAA_5
AAA_16
AAA_7
AAA_30
DEAD
PhoH
ResIII
nSTAND_NTPase5
AAA_19
Mg_chelatase
AAA_24
bpMoxR
AAA_3
Sigma54_activ_2
LisH_TPL
Motif
Other DBs
NCBI-GeneID:
692838
NCBI-ProteinID:
NP_001040148
UniProt:
A0A8R1XEZ4
Q2F659
LinkDB
All DBs
Position
8:10515728..10523735
Genome browser
AA seq
334 aa
AA seq
DB search
MTVGETGQNLPWVEKYRPKRLDDLVSHDDIIKTINQFMKENQLPHLLFYGPPGTGKTSTI
LACAKQMYTPQQFSSMVLELNASDDRGIGIVRGQILSFASTRTIFKAGPKLIILDEADAM
TNDAQNALRRIIEKYTENVRFCIICNYLGKIIPALQSRCTRFRFAPLKQDQIVPRLQEIV
TTEGVKMSEGGMKALLTLSGGDMRKVLNTLQSTWLAYRDVTEDNVYTCVGHPLRADIDSI
LNWLLNENDFSACFKSIQDLKIAKGLALSDILAEVHTIIQRVKLPPEVLVSLLIKMSDAE
ARLASGSSERVELAALIASFQIARDQVKLDTEVS
NT seq
1005 nt
NT seq
+upstream
nt +downstream
nt
atgactgttggggaaacaggccaaaatttgccatgggttgaaaaatatcgcccaaaaaga
ttggatgatttagtatctcatgatgatataataaaaacaataaatcaatttatgaaagag
aatcagctcccacatctactattctacggtcctcctggaaccgggaagacatctaccatt
ctagcctgtgccaaacaaatgtacactccacagcaatttagttcgatggtgttggaactt
aatgcttctgacgatagaggcattggcattgttagaggtcagatactcagttttgcctca
acaaggactatatttaaagcaggacctaaattaattatacttgatgaagctgatgctatg
acaaatgacgctcagaatgcactaaggagaattatagagaagtacaccgagaatgtaagg
ttttgcataatatgcaactacctgggtaaaattattccagcattacagtcgcggtgtacg
cgatttcgttttgcccctctcaagcaagatcaaattgtgccgagattacaagaaattgtc
acaacggaaggtgtaaaaatgtcagagggcggaatgaaggcgcttctcaccttgtccggg
ggtgatatgagaaaggttttgaatacgcttcaaagcacgtggctggcgtatcgtgacgtc
accgaagataatgtttacacttgcgtcggccaccccctccgcgccgatatcgacagcata
ctcaattggttgctaaacgaaaatgatttttccgcctgctttaaatccatacaagacttg
aagattgcaaaaggattagcactgagcgatatattggctgaagtccatactatcatacag
agagtgaaactgcctccagaagtattagtgtcattgctcataaagatgtcagacgctgaa
gcgaggttggcgagcggaagcagcgagcgggttgaacttgccgcgctcatcgcgagcttc
cagatcgctagggatcaagtcaaactagacacagaagtttcgtag
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integrated database retrieval system
