KEGG   Bombyx mori (domestic silkworm): 692918
Entry
692918            CDS       T02817                                 
Name
(RefSeq) WD40 protein
  KO
K14962  COMPASS component SWD2
Organism
bmor  Bombyx mori (domestic silkworm)
Pathway
bmor03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:bmor00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    692918
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:bmor03019]
    692918
   03036 Chromosome and associated proteins [BR:bmor03036]
    692918
Messenger RNA biogenesis [BR:bmor03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    Cleavage and polyadenylation specificity factor (CPSF) complex
     692918
Chromosome and associated proteins [BR:bmor03036]
 Eukaryotic type
  Histone modification proteins
   HMT complexes
    COMPASS/SET1 complex
     692918
    COMPASS/SET1 complex (yeast)
     692918
SSDB
Motif
Pfam: WD40_Prp19 WD40 WD40_WDHD1_1st Beta-prop_EML_2 WD40_CDC20-Fz Beta-prop_CAF1B_HIR1 Beta-prop_TEP1_2nd WDR55 EIF3I ANAPC4_WD40 Beta-prop_WDR90_POC16_2nd Beta-prop_IFT122_1st WD40_MABP1-WDR62_2nd WD40_MABP1-WDR62_1st Beta-prop_EML Beta-prop_TEP1_C WDR90_beta-prop_4th Beta-prop_RIG_2nd Beta-prop_WDR75_1st Beta-prop_WDR19_1st Beta-prop_SPT8 WD40_RFWD3 WD_LRWD1 Beta-prop_WDR35_TULP_N Beta-prop_Vps41 MIOS_WD40 RMC1_N Beta-prop_NUP159_NUP214 Beta-prop_Nup120_160 PROPPIN
Other DBs
NCBI-GeneID: 692918
NCBI-ProteinID: NP_001040226
UniProt: Q2F5U4
LinkDB
Position
4:complement(8528305..8530383)
AA seq 315 aa
MMKLVDQVVRSFKVAKVFRENTDKINSIDFSPNGETLISCSEDDQIVIYDCEKGTQMITV
NSKKYGVDLIHFTHAKNTAIHSSTKVDDTIRYLSLHDNKYIRYFPGHTKKVVTMCLSPVE
DTFLSGSLDKTLRLWDLRSPNCQGLMHLSGRPVAAYDPEGLIFAAGVNSESIKLYDLRSF
DKGPFVTFKLNQEKECDWTGLKFSRDGKTMLISTNGSIIRLVDAYHGTPLQTFTGHLNNK
GIPIEASFSPDSQYIFSGSTDGRVHVWNADTGYKVCVLNGDHPAPIQCVQFNPKFMMLAS
ACTNMAFWLPTIDDV
NT seq 948 nt   +upstreamnt  +downstreamnt
atgatgaaactcgttgatcaagttgtccgaagctttaaagttgccaaagtattccgtgaa
aatacagacaaaattaacagtatagatttttctcctaatggggagacattgatttcatgt
agcgaagatgatcaaatcgttatatacgattgtgaaaaaggaacacaaatgattacggtc
aacagtaaaaaatacggggtcgatttgatacattttacacatgccaaaaacactgcaatt
cacagttccaccaaagtagacgacacaatacggtatttatcccttcacgataacaagtac
attagatatttcccagggcatacaaaaaaagttgtgacaatgtgtttatccccggttgaa
gacacatttttatctggatcattagacaaaacattacgactgtgggatcttcggtcgcct
aattgtcagggactaatgcatttatctggaagacctgttgcagcttatgaccctgaaggt
ctcatatttgcagctggcgttaattccgagagcatcaagctttatgatttgaggtctttt
gacaagggcccctttgtcacatttaaattaaaccaagaaaaggaatgtgattggacaggt
ttgaaattttcccgtgatggcaaaactatgttaataagtaccaatgggtcaataattcgt
ttggtggatgcatatcatggaactccacttcaaaccttcactggacacttaaacaacaaa
gggatacctatagaagcatcttttagtcctgattcccagtacatcttcagtggttcaaca
gatggtcgtgttcatgtctggaatgctgatactggttacaaagtatgtgtcttgaatggt
gatcatccagcacctatacaatgcgtacagttcaatcctaagttcatgatgctggcatca
gcatgtacaaatatggcattctggttacccacaattgatgatgtttaa

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