Bombyx mori (domestic silkworm): 693102
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Entry
693102 CDS
T02817
Name
(RefSeq) Upf3 regulator of nonsense transcripts-like protein B
KO
K14328
regulator of nonsense transcripts 3
Organism
bmor
Bombyx mori (domestic silkworm)
Pathway
bmor03013
Nucleocytoplasmic transport
bmor03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
bmor00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
693102
03015 mRNA surveillance pathway
693102
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bmor03019
]
693102
Messenger RNA biogenesis [BR:
bmor03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
693102
mRNA cycle factors
P-body specific factors
693102
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Smg4_UPF3
Motif
Other DBs
NCBI-GeneID:
693102
NCBI-ProteinID:
NP_001040320
UniProt:
Q2F5U6
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All DBs
Position
5:complement(11877270..11881850)
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AA seq
499 aa
AA seq
DB search
MTEDQDGKDSQSDSGSKTFINKSKDKKSKIHRPLTKIILRRLPPTMTEETFWEQVSPIPE
HDYFYFAKPDPTWGNNLFSRAYINFVNVEDIFLFRDKFDGYVFLDEKGGEYVGIVEYAPF
QRISKKKKKKDPKCGTLESDPIYQEFIESLNKDPEVESQPKLEYSYPINDVSEKKTQSTP
LLEYLAARKLDKRGRDERRRRDNDKRKMRIERKTKEGPIKEEDNEDTEVRKIKTRESEKE
KKDSKEDQTKLDDGMVFESKSYKERKPNLKIDKKKKSENDRIEKEDEVGDDLDGQKKDKR
EKNKIQESPREQKSKKYSDTRKERIKQNVLITKSEKEYALSKLISLCPKSTALSNDIKPF
TQLPQVKTDDLSKIIDGMDKKTKLEAKEETTRNSKDSDKVETKSNVRRNSLDSNKATSND
ESDSKKTTFEERPKSSEREGSEETDTCDGERRAERRIRNKDRPSLVIYQPGMGKFSKQRL
AKEKETLPTKVSDSEKKDT
NT seq
1500 nt
NT seq
+upstream
nt +downstream
nt
atgactgaggatcaagatggtaaagactcacagtcagattcgggttccaagacattcatc
aacaagagcaaggacaagaaatctaagatacatcgtccgttgacaaaaataattcttcga
cgtttaccgcccacgatgactgaggaaacgttttgggagcaagtatcgcctattccagag
catgactatttttattttgccaaaccggacccgacttggggcaataacctattttctaga
gcgtatatcaatttcgttaacgtggaagatatttttctgttccgagataaatttgacggt
tatgttttcttagatgaaaaaggtggagaatatgtaggcatagttgaatatgcacccttc
caaagaatttcaaagaaaaaaaagaagaaagatcctaaatgtggaacacttgagagtgac
ccaatttatcaagagtttatcgagagtctgaacaaagatcctgaggttgagagccaacct
aaactagaatattcttacccaataaatgatgttagtgaaaaaaaaacacaatcaacacct
ttgctggaatatctagccgcacgtaaactagacaagagaggtagagatgaacgtcgtagg
cgcgataatgacaagagaaaaatgagaattgaacgaaaaacaaaggaaggtcctatcaag
gaagaagataatgaggatacagaagtaagaaaaattaaaaccagagaatctgagaaagag
aagaaagattctaaagaagatcaaacaaaactggacgacgggatggtattcgaatctaaa
tcatacaaagaacgtaaacctaatttaaaaattgataaaaagaagaaatctgaaaacgat
agaattgaaaaagaggacgaagtaggagatgatcttgatgggcagaaaaaggataaacgc
gaaaaaaataagatacaagaatctccacgtgagcaaaagagtaaaaaatacagcgacact
aggaaagagagaatcaaacaaaatgttttaattacaaaatctgaaaaagagtatgctctt
tcgaagctcatatctctatgtcccaaaagtactgcactcagtaatgatattaaaccattc
actcaactgcctcaagtgaaaactgatgacttatccaagattattgatggaatggataaa
aaaacaaagcttgaagcaaaagaagaaacgacacgaaactcaaaagattcagacaaagtt
gagactaagagtaatgtacgcagaaatagccttgactcaaataaagccacaagcaatgat
gaatctgattcaaagaaaacaaccttcgaagaaagaccaaaatcttcggaacgtgaagga
tcggaagagacagacacatgtgacggcgaacgtcgcgctgaacgcagaataagaaataag
gatcggcccagtctcgtgatttaccagcccggcatggggaagtttagtaaacagcgtctc
gcgaaagaaaaggaaacgctcccgacgaaagtgagcgacagtgaaaagaaagacacttga
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